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The map label for this gene is rpiR [C]

Identifier: 77458286

GI number: 77458286

Start: 2346639

End: 2347493

Strand: Reverse

Name: rpiR [C]

Synonym: Pfl01_2059

Alternate gene names: 77458286

Gene position: 2347493-2346639 (Counterclockwise)

Preceding gene: 77458289

Following gene: 77458285

Centisome position: 36.46

GC content: 63.04

Gene sequence:

>855_bases
ATGCCCCCTTTAAGAGACCTGATCACCGACCCCGGCCTTGACCTGACGCCGTCGGAGCGCAAAGTCGTTCGCGCCTTGCT
CGATCAGTATCCACGCAACGGGCTTGGCCCGATGGCGCGCCTGGCCGAACATGCCGGCGTCAGCGATCCGACCATCGTGC
GGCTGGTGAAAAAACTCGGCTTCGGTGGTTACGCCGAATTCCAGGACGCCCTGCTCAGCGACATGGACCATCGCCTGCGC
TCGCCGCGCACTCTGTTGCAACCGCGCTCGCATCAGAACAAAGACGATGCCTGGAGCCATTATCTGGCTCATAGCCATAA
CCTGCTGGCCGAAACCCAGGCCCTGACCCAACCGGAAGATGTACGAATTCTGGCCGACTGGCTGCTCGACACCCGGCATC
AGGTCTACTGCTTCGGCGGGCGCTTCAGCAGCCTGATGGCGACTTACCTGCTCAACCACTTGCGCCTGCTGCGCCCCGGC
TGCTTTGCGCTGGAAGACAACGCGCAACTGCCCGATCGCCTGTTCGACCTGCAACGCCAGGACGTGGTGCTGGTGTTCGA
CTATCGCCGCTACCAGACCCAGGCCCTGCGCGTGGCGAGCGCGGCGAAGAACAGCAATGCTCGCGTCGTGCTGTTCACCG
ACATCTACGCCTCGCCGCTGCGCGAACTGGCCGACATGATCATCAGCGCACCGGTGGAGTCGGCTTCGCCGTTCGACACC
ATGGTCCCGGCGCTGGCTCAGGTTGAAGCGCTGATTGCCTGCCTGACCCTGCGCAGCCCGGACCTGGCCGATCGCCTGGA
AGGCATCGATGCCCTGCGCAACGACTTCGACACCCATTTGCTGGAGGATAAATAA

Upstream 100 bases:

>100_bases
TAAACGCCGAAAAATTCGCTAGACATGTAGCGTCAGTTACATAAATACTGTTTTAACGGATTGTGAAGCGAATTCAACAC
CCCATCCAGCAGGAGCCCGG

Downstream 100 bases:

>100_bases
GGATGTTCAGCCTTCCCCATCGTTCGCCACGGGACCTGCCGTTTGCCACCGACCACACCGCCCTGTTGCTGGTGGACATG
CAGCGCGCCTGGCTCGAGCC

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; Transcriptional Regulator Protein; SIS Domain-Containing Protein; SIS Domain Protein; N-Acylmannosamine Kinase; Transcriptional Regulator Protein RpiR Family; RpiR-Family Transcriptional Regulator; Transcriptional Regulator RpiR Family SIS Domain; Bifunctional Protein Glk; Transcriptional Regulator Rpir Family; Transcription Regulator Protein; Helix-Turn-Helix Protein RpiR; N-Acetylmannosamine Kinase; Transcription Regulator RpiR Family; RpiR Family Regulatory; HTH Transcriptional Regulator Sugar Isomerasedomain; Transcriptional Regulator Family Protein; HTH/SIS Domain-Containing Protein; Transcriptional Regulator RpiR Family Protein; RpiR Family Transcription Regulator

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MPPLRDLITDPGLDLTPSERKVVRALLDQYPRNGLGPMARLAEHAGVSDPTIVRLVKKLGFGGYAEFQDALLSDMDHRLR
SPRTLLQPRSHQNKDDAWSHYLAHSHNLLAETQALTQPEDVRILADWLLDTRHQVYCFGGRFSSLMATYLLNHLRLLRPG
CFALEDNAQLPDRLFDLQRQDVVLVFDYRRYQTQALRVASAAKNSNARVVLFTDIYASPLRELADMIISAPVESASPFDT
MVPALAQVEALIACLTLRSPDLADRLEGIDALRNDFDTHLLEDK

Sequences:

>Translated_284_residues
MPPLRDLITDPGLDLTPSERKVVRALLDQYPRNGLGPMARLAEHAGVSDPTIVRLVKKLGFGGYAEFQDALLSDMDHRLR
SPRTLLQPRSHQNKDDAWSHYLAHSHNLLAETQALTQPEDVRILADWLLDTRHQVYCFGGRFSSLMATYLLNHLRLLRPG
CFALEDNAQLPDRLFDLQRQDVVLVFDYRRYQTQALRVASAAKNSNARVVLFTDIYASPLRELADMIISAPVESASPFDT
MVPALAQVEALIACLTLRSPDLADRLEGIDALRNDFDTHLLEDK
>Mature_283_residues
PPLRDLITDPGLDLTPSERKVVRALLDQYPRNGLGPMARLAEHAGVSDPTIVRLVKKLGFGGYAEFQDALLSDMDHRLRS
PRTLLQPRSHQNKDDAWSHYLAHSHNLLAETQALTQPEDVRILADWLLDTRHQVYCFGGRFSSLMATYLLNHLRLLRPGC
FALEDNAQLPDRLFDLQRQDVVLVFDYRRYQTQALRVASAAKNSNARVVLFTDIYASPLRELADMIISAPVESASPFDTM
VPALAQVEALIACLTLRSPDLADRLEGIDALRNDFDTHLLEDK

Specific function: Regulatory Protein Involved In Rpib Gene Repression. Also Involved In Als Operon Repression. [C]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32023; Mature: 31892

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLRDLITDPGLDLTPSERKVVRALLDQYPRNGLGPMARLAEHAGVSDPTIVRLVKKLG
CCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHC
FGGYAEFQDALLSDMDHRLRSPRTLLQPRSHQNKDDAWSHYLAHSHNLLAETQALTQPED
CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
VRILADWLLDTRHQVYCFGGRFSSLMATYLLNHLRLLRPGCFALEDNAQLPDRLFDLQRQ
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCC
DVVLVFDYRRYQTQALRVASAAKNSNARVVLFTDIYASPLRELADMIISAPVESASPFDT
CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MVPALAQVEALIACLTLRSPDLADRLEGIDALRNDFDTHLLEDK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PPLRDLITDPGLDLTPSERKVVRALLDQYPRNGLGPMARLAEHAGVSDPTIVRLVKKLG
CCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHC
FGGYAEFQDALLSDMDHRLRSPRTLLQPRSHQNKDDAWSHYLAHSHNLLAETQALTQPED
CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
VRILADWLLDTRHQVYCFGGRFSSLMATYLLNHLRLLRPGCFALEDNAQLPDRLFDLQRQ
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCC
DVVLVFDYRRYQTQALRVASAAKNSNARVVLFTDIYASPLRELADMIISAPVESASPFDT
CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MVPALAQVEALIACLTLRSPDLADRLEGIDALRNDFDTHLLEDK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA