| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yveL [H]
Identifier: 77458249
GI number: 77458249
Start: 2305843
End: 2306490
Strand: Reverse
Name: yveL [H]
Synonym: Pfl01_2022
Alternate gene names: 77458249
Gene position: 2306490-2305843 (Counterclockwise)
Preceding gene: 77458250
Following gene: 77458248
Centisome position: 35.82
GC content: 64.04
Gene sequence:
>648_bases ATGGACGGTTCAACCAACAAAAGCCTGAGCATCGCCAGCCCCAGCGAGTCGAACCTGACCTCGACCGTGCTGGACCTGGA TCTGCGGATCCTGTTCCTGACCGCCGCCAACCCCGGCGCCGGCACCACCACCAGCGCCCTGGCGCTGGCCAGTCAACTGG CGCAAATGAGCAGCGGCCAGGTGCTGTACGTCGACGCCAGCCAGTCGGCGAGCAACCTCACCCAGCAACTGAACCTGAGC AAGGAGCGCGGCCTGCGCGACCTGCTGTTCAACCCGGACAACCCGCCGCTGTTGCAGGACTGCGTGGTGCAGGTGTCGAG CCTGCCGTTTCACGTGCTGCCCAACGGTCGTCCGATCCGCACTACAGAACACCTGACTGCCGAGCGTCTGAGCCCGCTGC TGGATCAACTGGGCGCTCAGTACCGCTTTGTGGTGATCGACGGCGACGCGGTGTATTCCGCCGCCGACACGCTGGTCATC AGCACCCAGGTCGACGGTGTGGTGTTCGTGGTACGCGCCGAAGACACCCGCTGGGAAGTCGCGCAAGCAGCCGTGCAGCG CTTGACCCAGGCCGGGGCAAAAGTGGTCGGCAGCGTGTTCAACCGGCGCAAGTACTACATGCCCAAATGGCTCTACAAAA ACCTGTAA
Upstream 100 bases:
>100_bases AGTTGGACCTCAGCTACATCGCCGAGCAGAGCCTTCTGCTTGATCTGAAGATTCTGTTGAAAACCCCCTTCAAAGTATTC AGCGGCCACGGAGCAAGCTA
Downstream 100 bases:
>100_bases GCAAACGCGAGGGATGACGCCATGAACGCCAAGATACTGGTTCTGCTGATGCTGCCGCTTGCAGGTTGCTCGAGCACTTC CGAAACCCAGAACATGCCGG
Product: chromosome partitioning ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MDGSTNKSLSIASPSESNLTSTVLDLDLRILFLTAANPGAGTTTSALALASQLAQMSSGQVLYVDASQSASNLTQQLNLS KERGLRDLLFNPDNPPLLQDCVVQVSSLPFHVLPNGRPIRTTEHLTAERLSPLLDQLGAQYRFVVIDGDAVYSAADTLVI STQVDGVVFVVRAEDTRWEVAQAAVQRLTQAGAKVVGSVFNRRKYYMPKWLYKNL
Sequences:
>Translated_215_residues MDGSTNKSLSIASPSESNLTSTVLDLDLRILFLTAANPGAGTTTSALALASQLAQMSSGQVLYVDASQSASNLTQQLNLS KERGLRDLLFNPDNPPLLQDCVVQVSSLPFHVLPNGRPIRTTEHLTAERLSPLLDQLGAQYRFVVIDGDAVYSAADTLVI STQVDGVVFVVRAEDTRWEVAQAAVQRLTQAGAKVVGSVFNRRKYYMPKWLYKNL >Mature_215_residues MDGSTNKSLSIASPSESNLTSTVLDLDLRILFLTAANPGAGTTTSALALASQLAQMSSGQVLYVDASQSASNLTQQLNLS KERGLRDLLFNPDNPPLLQDCVVQVSSLPFHVLPNGRPIRTTEHLTAERLSPLLDQLGAQYRFVVIDGDAVYSAADTLVI STQVDGVVFVVRAEDTRWEVAQAAVQRLTQAGAKVVGSVFNRRKYYMPKWLYKNL
Specific function: Unknown
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI1787216, Length=187, Percent_Identity=27.807486631016, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 23352; Mature: 23352
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSTNKSLSIASPSESNLTSTVLDLDLRILFLTAANPGAGTTTSALALASQLAQMSSGQ CCCCCCCEEEEECCCCCCHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC VLYVDASQSASNLTQQLNLSKERGLRDLLFNPDNPPLLQDCVVQVSSLPFHVLPNGRPIR EEEEECCCCHHHHHHHHCCCHHCCCHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCC TTEHLTAERLSPLLDQLGAQYRFVVIDGDAVYSAADTLVISTQVDGVVFVVRAEDTRWEV HHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCEEEEEEECCCEEEEEEECCCHHHH AQAAVQRLTQAGAKVVGSVFNRRKYYMPKWLYKNL HHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHCC >Mature Secondary Structure MDGSTNKSLSIASPSESNLTSTVLDLDLRILFLTAANPGAGTTTSALALASQLAQMSSGQ CCCCCCCEEEEECCCCCCHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC VLYVDASQSASNLTQQLNLSKERGLRDLLFNPDNPPLLQDCVVQVSSLPFHVLPNGRPIR EEEEECCCCHHHHHHHHCCCHHCCCHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCC TTEHLTAERLSPLLDQLGAQYRFVVIDGDAVYSAADTLVISTQVDGVVFVVRAEDTRWEV HHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCEEEEEEECCCEEEEEEECCCHHHH AQAAVQRLTQAGAKVVGSVFNRRKYYMPKWLYKNL HHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]