| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is purR [H]
Identifier: 77458149
GI number: 77458149
Start: 2194615
End: 2195634
Strand: Direct
Name: purR [H]
Synonym: Pfl01_1922
Alternate gene names: 77458149
Gene position: 2194615-2195634 (Clockwise)
Preceding gene: 77458148
Following gene: 77458150
Centisome position: 34.09
GC content: 60.98
Gene sequence:
>1020_bases ATGGCAACGATCAAGGATGTGGCGGCACTTGCAGGAATTTCCTACACGACTGTGTCCCACGTAGTAAACAAGACCCGACC GGTGAGCGAAGAAGTGCGGCTCAAGGTCGAGGCGGCAATCAAGAGTCTCGACTATGTGCCGAGCGCCGTGGCCCGGTCGC TGAAAGCGAAAACCACCGCCACCATCGGTTTGCTGGTGCCCAACAGCCTCAACCCATACTTCGCCGAACTGGCGCGCGGG ATCGAGGATTACTGCGAGCGTAACGGTTACTGCGTGATTCTCTGCAACTCCGACGACAACCCGGACAAGCAGCGCAGCTA CCTGCGGGTCCTGTTGGAAAAACGCATCGACGGCTTGATCGTCGCCTCGGCGGGTGGCGACAGCGGTCTGGCGCAAGGGT TGGCGGGTGTAAAGACGCCGATGGTGATCGTCGACCGTGGGCTCGAAGGCGTGGATGCCGACCTGGTGCGCATTGATCAC GAATATGGCGCGTACCTCGCGACGCGGCATCTGCTCGAGCTCGGTCATCGCGATATCGCCACGATCGGTGGTCCGGCCAG CACCAGTGTTGCGCAAATGCGTCAGGCCGGTTTTGCTCGAGCGCTGAAAGAGGCCGGTGTTGAAGTGGCCCCGTCGCGCA TGCTGGAAAGCGACTTCACCAGCACTGGCGGTTACAACGCTGCTTCCATCCTGCTTGAACGTAACCCGCCGAGCGCGATT TTTGCCGGTAACGACATGATCGGCATTGGTGTGCTGCGGGCGGCGGCAGAGCGCAACGTGCGCGTGCCCGCCGAGTTGTC GGTGATCGGTTTCGACGATATCCAGATGAGTCGTTACGTGTATCCCGCGCTGACGACCGTGGGCCAGTCGATCCTGCAAT TGGGCGAGATGGCCGCGGAAGTTCTGTTGCGAAGAATTGCCACCCCGGATCTGGCGACGGATCAGCGGATCGTGACCCCG AGTATTGTCCTGCGCGAATCGACTGCACCGCTGTCCGGCGTGTTCACCGAATACCGCTGA
Upstream 100 bases:
>100_bases GACCGAGCCGACCAAGCGCATCATCACCGGTGCGGTGATCGTGATCGCCGTGGTGCTCGACACCTATCGCAGTCAACGCG CAAGCCGACGGGGCTGATAA
Downstream 100 bases:
>100_bases AACGAATTGAAGAGTAGTGATGTATGTCCGCAAATGTAGTGGTAATAGGCAGCCTGAACATGGACCTGGTCACCCGGGCG CCGCGCTTGCCCCGGGGCGG
Product: LacI family transcription regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIKSLDYVPSAVARSLKAKTTATIGLLVPNSLNPYFAELARG IEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLIVASAGGDSGLAQGLAGVKTPMVIVDRGLEGVDADLVRIDH EYGAYLATRHLLELGHRDIATIGGPASTSVAQMRQAGFARALKEAGVEVAPSRMLESDFTSTGGYNAASILLERNPPSAI FAGNDMIGIGVLRAAAERNVRVPAELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMAAEVLLRRIATPDLATDQRIVTP SIVLRESTAPLSGVFTEYR
Sequences:
>Translated_339_residues MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIKSLDYVPSAVARSLKAKTTATIGLLVPNSLNPYFAELARG IEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLIVASAGGDSGLAQGLAGVKTPMVIVDRGLEGVDADLVRIDH EYGAYLATRHLLELGHRDIATIGGPASTSVAQMRQAGFARALKEAGVEVAPSRMLESDFTSTGGYNAASILLERNPPSAI FAGNDMIGIGVLRAAAERNVRVPAELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMAAEVLLRRIATPDLATDQRIVTP SIVLRESTAPLSGVFTEYR >Mature_338_residues ATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIKSLDYVPSAVARSLKAKTTATIGLLVPNSLNPYFAELARGI EDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLIVASAGGDSGLAQGLAGVKTPMVIVDRGLEGVDADLVRIDHE YGAYLATRHLLELGHRDIATIGGPASTSVAQMRQAGFARALKEAGVEVAPSRMLESDFTSTGGYNAASILLERNPPSAIF AGNDMIGIGVLRAAAERNVRVPAELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMAAEVLLRRIATPDLATDQRIVTPS IVLRESTAPLSGVFTEYR
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787948, Length=342, Percent_Identity=43.859649122807, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI1790194, Length=330, Percent_Identity=40.9090909090909, Blast_Score=252, Evalue=2e-68, Organism=Escherichia coli, GI1790369, Length=331, Percent_Identity=30.2114803625378, Blast_Score=181, Evalue=5e-47, Organism=Escherichia coli, GI1789202, Length=331, Percent_Identity=35.9516616314199, Blast_Score=177, Evalue=8e-46, Organism=Escherichia coli, GI1788474, Length=332, Percent_Identity=34.6385542168675, Blast_Score=164, Evalue=9e-42, Organism=Escherichia coli, GI1789068, Length=314, Percent_Identity=31.5286624203822, Blast_Score=147, Evalue=7e-37, Organism=Escherichia coli, GI1786540, Length=329, Percent_Identity=30.0911854103343, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1787580, Length=313, Percent_Identity=30.6709265175719, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1787906, Length=250, Percent_Identity=31.6, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786268, Length=319, Percent_Identity=26.3322884012539, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790715, Length=311, Percent_Identity=26.3665594855305, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1789456, Length=303, Percent_Identity=29.7029702970297, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI48994940, Length=305, Percent_Identity=27.5409836065574, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1790689, Length=328, Percent_Identity=24.390243902439, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790192, Length=243, Percent_Identity=27.5720164609054, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 36304; Mature: 36173
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIKSLDYVPSAVARSLKAKTTA CCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHE TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLI EEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE VASAGGDSGLAQGLAGVKTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHRDIA EEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHEEECHHHHHHHHHHHHHHHCCCCCE TIGGPASTSVAQMRQAGFARALKEAGVEVAPSRMLESDFTSTGGYNAASILLERNPPSAI ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCEE FAGNDMIGIGVLRAAAERNVRVPAELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMAAE EECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLRRIATPDLATDQRIVTPSIVLRESTAPLSGVFTEYR HHHHHHCCCCCCCCCEEECCCEEEECCCCCHHHHHCCCC >Mature Secondary Structure ATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIKSLDYVPSAVARSLKAKTTA CCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHE TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLI EEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE VASAGGDSGLAQGLAGVKTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHRDIA EEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHEEECHHHHHHHHHHHHHHHCCCCCE TIGGPASTSVAQMRQAGFARALKEAGVEVAPSRMLESDFTSTGGYNAASILLERNPPSAI ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCEE FAGNDMIGIGVLRAAAERNVRVPAELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMAAE EECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLRRIATPDLATDQRIVTPSIVLRESTAPLSGVFTEYR HHHHHHCCCCCCCCCEEECCCEEEECCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA