Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77458140

Identifier: 77458140

GI number: 77458140

Start: 2186422

End: 2186787

Strand: Direct

Name: 77458140

Synonym: Pfl01_1913

Alternate gene names: NA

Gene position: 2186422-2186787 (Clockwise)

Preceding gene: 77458138

Following gene: 77458141

Centisome position: 33.96

GC content: 60.38

Gene sequence:

>366_bases
GTGCGCAAATTGGTCTGGGTAGTCGCGGCACTGGCATTGGCAGGATGTGGCGAAGGCAAGAGTGTGGATGCGCAAAAGCC
GAAACCGGCGGTAGTAACGGCGCCTGCTGTGGTGGGTCCGCAGTGGGAGCTGGAAGTGCGCGGTGAAACCCCTCAGGCCG
TCAGCGACCTCAGCGGCTGGCTGATCGAGCACGGCTTTGTGGCTAGCGTCATCAAGGATGCCAGCGGCAAGACCCGAATC
CTCCTCGGTCCTTTCAATTCGAAAGATGATGCCGAGGCGCGTCAGGCGGATGTGAATGCAGCACTGGTCAAGGCGAAGAA
GCAGAACATCGAAACGCTGGTGATCGAGCGCGCTCCCGCGCAATAA

Upstream 100 bases:

>100_bases
CTGCCAGCATCAATCTCGTCCTTTTGTGCCCATTTTGCGGGGCTCCGAAAGTATTCTCGAATGTTAAGATCGCCGCTTTG
AAAATTCAGAGGGAAGCGTT

Downstream 100 bases:

>100_bases
GCGATCCATTTGGCGGAGCTGACTAAAGGGTGCCTCCCGTGATTCGTTTTCAAGGAATCACTGAAGATACCCGGAAGGAG
CTCCGCATGGCCTCCGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MRKLVWVVAALALAGCGEGKSVDAQKPKPAVVTAPAVVGPQWELEVRGETPQAVSDLSGWLIEHGFVASVIKDASGKTRI
LLGPFNSKDDAEARQADVNAALVKAKKQNIETLVIERAPAQ

Sequences:

>Translated_121_residues
MRKLVWVVAALALAGCGEGKSVDAQKPKPAVVTAPAVVGPQWELEVRGETPQAVSDLSGWLIEHGFVASVIKDASGKTRI
LLGPFNSKDDAEARQADVNAALVKAKKQNIETLVIERAPAQ
>Mature_121_residues
MRKLVWVVAALALAGCGEGKSVDAQKPKPAVVTAPAVVGPQWELEVRGETPQAVSDLSGWLIEHGFVASVIKDASGKTRI
LLGPFNSKDDAEARQADVNAALVKAKKQNIETLVIERAPAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12795; Mature: 12795

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLVWVVAALALAGCGEGKSVDAQKPKPAVVTAPAVVGPQWELEVRGETPQAVSDLSGW
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEECCCEEEEECCCCCHHHHHHHHH
LIEHGFVASVIKDASGKTRILLGPFNSKDDAEARQADVNAALVKAKKQNIETLVIERAPA
HHHCCHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
Q
C
>Mature Secondary Structure
MRKLVWVVAALALAGCGEGKSVDAQKPKPAVVTAPAVVGPQWELEVRGETPQAVSDLSGW
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEECCCEEEEECCCCCHHHHHHHHH
LIEHGFVASVIKDASGKTRILLGPFNSKDDAEARQADVNAALVKAKKQNIETLVIERAPA
HHHCCHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA