Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is adhB [H]

Identifier: 77458134

GI number: 77458134

Start: 2180571

End: 2181806

Strand: Direct

Name: adhB [H]

Synonym: Pfl01_1907

Alternate gene names: 77458134

Gene position: 2180571-2181806 (Clockwise)

Preceding gene: 77458133

Following gene: 77458135

Centisome position: 33.87

GC content: 61.97

Gene sequence:

>1236_bases
ATGAAGCAATTACTGACCCGCCTGACCCTGGCGGTCGGGCTGGCTGTGCCTGTGTTGGCGGCGCATGCGGATGATCAGGT
CAAGCGCGGCGAATACCTTGCCCGCGCGGCCGACTGCATGGCGTGCCACACGGCGCCAGGCGGTGCGCCGTTTGCCGGAG
GCCTGCCGATCGTGTCGCCGTTCGGCACGATCTACGGCACCAACATCACTCCAAGCAAAGAGCACGGCATCGGTTTGTAC
AATGATGACGAATTCTTCGCTGCGCTCACTGAGGGCAAGCGTCGTGACGGCGCGAACCTCTATCCGGCGATGCCGTACAC
CTCCTACCACTTGATGCCGCGTGCGGATTCGGATGCGATTCATGCGTATCTGAAAACCGTCGAACCGATCGAGCGTGCAG
CGCCGGTAACGAGCCTGAGCTTCCCGTTCAACGTGCGTCCGGGCTTGATTGGCTGGAACATGATGTATGGCAAAGCCTTG
AAGCTCGAATCTGCCGAAGGCAAAAGCGAGGCGTGGAAACGCGGCCAGTACATGGTCGAAGTGCTTGGCCATTGCGGCGA
ATGCCACACGCCGCGCGGCCTGCCGGGCGCGATGCAGTTGGACAAGCGCCTGACCGGCGGCATCCTCAACGGCTACCTGG
CACCGAGCCTGCTCGCCACTGATCTGGCGGCGCGCGGCTGGAACCATCAGGACCTGAGTACGTTCCTCAAGCACGGCATG
AGCGCCCAGGGCACGATGTTCAACGAGATGTTTCCGGTGTTCCACAACAGCACTCAGGGTCTGAATGATCCGGATCTGGC
GGCGATGGCGACTTTCCTGCTGGGCGACAAGCCTCCGGCGGCGAAAGAGCTGACCGAAGTGCCGGTGGAAAAACTCAGTG
CCAGCGCTCAACGCGGCCGTCAGGAATACTTGAATGTCTGCGCTGGCTGTCATGCGGCCGGTGGCGAAGGCAAACCGCAC
ATTGCGGTAGCCATGCGCGGCAACACCACGCTGCGCCTGGAAGATCCGCGCAACCTGTTGCGAGTGATCGAGGACGGTAT
CGGCGAACAGAAATTCGCCGGGTTCGAACACATGCAGCCGATGCCGGGTTTTGCCGACAAGCTCAGTGCCGAACAACTGA
CCGATCTGCTGAACTACCTGCGTCAGGGGTGGGGTGGGCAGTCGGCCGAGCTGGCGGTCGGCGATGTGCAGAAGCTTCAG
GCTGATGCTCCGTCCATCGAGCACAAGGCGCACTGA

Upstream 100 bases:

>100_bases
GCCTCGGTCATCACGTCTGCCGTTGCACCGGGTACGTGCGTTACTACAACGCTACCCGCAACGTGCTGACCGATCTCGGC
CTGGTCAAGGAGGGTTAAGC

Downstream 100 bases:

>100_bases
TCATGCAGCATCTCGATCTGCAGGTTGTGCGCCGGGCGCTGGAGTGGTCGACGGCGGGGCAGCGCATCTGGCTCTGCACC
GTGCTGACCACCTATGGTTC

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c-553; Cytochrome c553; G3-ADH subunit II [H]

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKQLLTRLTLAVGLAVPVLAAHADDQVKRGEYLARAADCMACHTAPGGAPFAGGLPIVSPFGTIYGTNITPSKEHGIGLY
NDDEFFAALTEGKRRDGANLYPAMPYTSYHLMPRADSDAIHAYLKTVEPIERAAPVTSLSFPFNVRPGLIGWNMMYGKAL
KLESAEGKSEAWKRGQYMVEVLGHCGECHTPRGLPGAMQLDKRLTGGILNGYLAPSLLATDLAARGWNHQDLSTFLKHGM
SAQGTMFNEMFPVFHNSTQGLNDPDLAAMATFLLGDKPPAAKELTEVPVEKLSASAQRGRQEYLNVCAGCHAAGGEGKPH
IAVAMRGNTTLRLEDPRNLLRVIEDGIGEQKFAGFEHMQPMPGFADKLSAEQLTDLLNYLRQGWGGQSAELAVGDVQKLQ
ADAPSIEHKAH

Sequences:

>Translated_411_residues
MKQLLTRLTLAVGLAVPVLAAHADDQVKRGEYLARAADCMACHTAPGGAPFAGGLPIVSPFGTIYGTNITPSKEHGIGLY
NDDEFFAALTEGKRRDGANLYPAMPYTSYHLMPRADSDAIHAYLKTVEPIERAAPVTSLSFPFNVRPGLIGWNMMYGKAL
KLESAEGKSEAWKRGQYMVEVLGHCGECHTPRGLPGAMQLDKRLTGGILNGYLAPSLLATDLAARGWNHQDLSTFLKHGM
SAQGTMFNEMFPVFHNSTQGLNDPDLAAMATFLLGDKPPAAKELTEVPVEKLSASAQRGRQEYLNVCAGCHAAGGEGKPH
IAVAMRGNTTLRLEDPRNLLRVIEDGIGEQKFAGFEHMQPMPGFADKLSAEQLTDLLNYLRQGWGGQSAELAVGDVQKLQ
ADAPSIEHKAH
>Mature_411_residues
MKQLLTRLTLAVGLAVPVLAAHADDQVKRGEYLARAADCMACHTAPGGAPFAGGLPIVSPFGTIYGTNITPSKEHGIGLY
NDDEFFAALTEGKRRDGANLYPAMPYTSYHLMPRADSDAIHAYLKTVEPIERAAPVTSLSFPFNVRPGLIGWNMMYGKAL
KLESAEGKSEAWKRGQYMVEVLGHCGECHTPRGLPGAMQLDKRLTGGILNGYLAPSLLATDLAARGWNHQDLSTFLKHGM
SAQGTMFNEMFPVFHNSTQGLNDPDLAAMATFLLGDKPPAAKELTEVPVEKLSASAQRGRQEYLNVCAGCHAAGGEGKPH
IAVAMRGNTTLRLEDPRNLLRVIEDGIGEQKFAGFEHMQPMPGFADKLSAEQLTDLLNYLRQGWGGQSAELAVGDVQKLQ
ADAPSIEHKAH

Specific function: Dehydration of primary alcohols (exception:methanol) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 44360; Mature: 44360

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLLTRLTLAVGLAVPVLAAHADDQVKRGEYLARAADCMACHTAPGGAPFAGGLPIVSP
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGTIYGTNITPSKEHGIGLYNDDEFFAALTEGKRRDGANLYPAMPYTSYHLMPRADSDAI
CHHHEECCCCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
HAYLKTVEPIERAAPVTSLSFPFNVRPGLIGWNMMYGKALKLESAEGKSEAWKRGQYMVE
HHHHHHHHHHHHHCCCCEECCCCCCCCCCEECHHHHCCEEEEECCCCHHHHHHHHHHHHH
VLGHCGECHTPRGLPGAMQLDKRLTGGILNGYLAPSLLATDLAARGWNHQDLSTFLKHGM
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
SAQGTMFNEMFPVFHNSTQGLNDPDLAAMATFLLGDKPPAAKELTEVPVEKLSASAQRGR
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
QEYLNVCAGCHAAGGEGKPHIAVAMRGNTTLRLEDPRNLLRVIEDGIGEQKFAGFEHMQP
HHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECCHHHHHHHHHHCCCHHHHCCHHHCCC
MPGFADKLSAEQLTDLLNYLRQGWGGQSAELAVGDVQKLQADAPSIEHKAH
CCCHHHHCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKQLLTRLTLAVGLAVPVLAAHADDQVKRGEYLARAADCMACHTAPGGAPFAGGLPIVSP
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGTIYGTNITPSKEHGIGLYNDDEFFAALTEGKRRDGANLYPAMPYTSYHLMPRADSDAI
CHHHEECCCCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
HAYLKTVEPIERAAPVTSLSFPFNVRPGLIGWNMMYGKALKLESAEGKSEAWKRGQYMVE
HHHHHHHHHHHHHCCCCEECCCCCCCCCCEECHHHHCCEEEEECCCCHHHHHHHHHHHHH
VLGHCGECHTPRGLPGAMQLDKRLTGGILNGYLAPSLLATDLAARGWNHQDLSTFLKHGM
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
SAQGTMFNEMFPVFHNSTQGLNDPDLAAMATFLLGDKPPAAKELTEVPVEKLSASAQRGR
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
QEYLNVCAGCHAAGGEGKPHIAVAMRGNTTLRLEDPRNLLRVIEDGIGEQKFAGFEHMQP
HHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEECCHHHHHHHHHHCCCHHHHCCHHHCCC
MPGFADKLSAEQLTDLLNYLRQGWGGQSAELAVGDVQKLQADAPSIEHKAH
CCCHHHHCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9055427 [H]