| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is usg [H]
Identifier: 77458121
GI number: 77458121
Start: 2163444
End: 2164454
Strand: Direct
Name: usg [H]
Synonym: Pfl01_1894
Alternate gene names: 77458121
Gene position: 2163444-2164454 (Clockwise)
Preceding gene: 77458120
Following gene: 77458122
Centisome position: 33.6
GC content: 62.91
Gene sequence:
>1011_bases ATGACCCAGACCCTTGATATTGCCGTGATCGGCGCCACCGGTACTGTCGGCGAAACCCTCGTGCAGATTCTCGAGGAGCG CGACTTCCCGGTCGGCACCTTGCACCTGTTGGCCAGCAGCGAATCCGCCGGCAGCTCGGTGCTGTTTCGCAACAAGAACG TGCGCGTGCGCGAAGTCGACGAGTTCGATTTCAGCAAGGTCAAACTGGCGTTCTTCGCCGCCGGCCCGGCCATCACCCTG AGTTACGCCGCCCGCGCTCACGCGGCGGGTTGCTCGCTGGTCGATTTGTCTGGCGCCTTGCCGGCGGATCAGGCGCCGCA AGTGGTGCCGGAAGCCAATGCCGATGTGCTGGCCGGTTTGAAAGCACCGTTCCAGGTCTGCAGCCCGAGCCCGTCGGCCA CCACATTGGCCGTGGTGCTGGCGCCGCTGCTCGATCTGATCGAGCTGCACTATGTGCATGTCACCGCCAATCTGGCGGTT TCCGCCCAAGGCCGCGAAGCCGTGACCGAGCTGGCACGTCAGACCGCCGAGCTGCTGAACATGCGTCCGCTGGAGCCGAC ATTCTTCGACCGGCAGATGGCTTTCAACCTGCTGGCCCAGGTCGGTACGCCCGACGCGCAAGGTCACACGCTGCTGGAAA AACGTCTGGTGCGCGAGCTGCGTCAGGTGCTGGCCAAGCCTTTATTAAAGATTTCCGCAACTTGCGTTCAAGCCCCGGTG TTTTTTGGCGATAGCTTTAGCGTGACCTTGCAGTCAGCGAGCGCGGTCGACCTGGAAAAGGTCAACGCCGCGCTTGAAGA GGCCGAGGGTATCGAGCTGGTCGAGGCCGGCGATTATCCGACCGCCGTCGGTGACGCGGTCGGGCAGGACGTGGTCTACG TCGGGCGGGTGCGCGCCGGTGTCGACGAGCCGTCGGAACTTAATCTGTGGCTGACGTCAGATAACGTACGCAAAGGTGCG GCCCTCAACGCCGTGCAGGTCGCCGAGTTGTTGATAAAAGACCTGCTGTAA
Upstream 100 bases:
>100_bases TGAAAGAACCCGCGCCTTGCACGAGGCGCGGGTTTTTTTTTGCCTGCGTGGCGGCCACCCGGTAAAGTGCCGCTCCCCCC GTTTCGCCAGAGGTAGCAAC
Downstream 100 bases:
>100_bases AAGATACTTGGCAACAATTTGTCGACTGATTCTAGCCGGGCGCTATGCTTGGCCAGATCGCTTGATGACGCGACACCCTC CGGGACTTTCCGGGGCATCA
Product: aspartate-semialdehyde dehydrogenase
Products: L-4-aspartyl phosphate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTQTLDIAVIGATGTVGETLVQILEERDFPVGTLHLLASSESAGSSVLFRNKNVRVREVDEFDFSKVKLAFFAAGPAITL SYAARAHAAGCSLVDLSGALPADQAPQVVPEANADVLAGLKAPFQVCSPSPSATTLAVVLAPLLDLIELHYVHVTANLAV SAQGREAVTELARQTAELLNMRPLEPTFFDRQMAFNLLAQVGTPDAQGHTLLEKRLVRELRQVLAKPLLKISATCVQAPV FFGDSFSVTLQSASAVDLEKVNAALEEAEGIELVEAGDYPTAVGDAVGQDVVYVGRVRAGVDEPSELNLWLTSDNVRKGA ALNAVQVAELLIKDLL
Sequences:
>Translated_336_residues MTQTLDIAVIGATGTVGETLVQILEERDFPVGTLHLLASSESAGSSVLFRNKNVRVREVDEFDFSKVKLAFFAAGPAITL SYAARAHAAGCSLVDLSGALPADQAPQVVPEANADVLAGLKAPFQVCSPSPSATTLAVVLAPLLDLIELHYVHVTANLAV SAQGREAVTELARQTAELLNMRPLEPTFFDRQMAFNLLAQVGTPDAQGHTLLEKRLVRELRQVLAKPLLKISATCVQAPV FFGDSFSVTLQSASAVDLEKVNAALEEAEGIELVEAGDYPTAVGDAVGQDVVYVGRVRAGVDEPSELNLWLTSDNVRKGA ALNAVQVAELLIKDLL >Mature_335_residues TQTLDIAVIGATGTVGETLVQILEERDFPVGTLHLLASSESAGSSVLFRNKNVRVREVDEFDFSKVKLAFFAAGPAITLS YAARAHAAGCSLVDLSGALPADQAPQVVPEANADVLAGLKAPFQVCSPSPSATTLAVVLAPLLDLIELHYVHVTANLAVS AQGREAVTELARQTAELLNMRPLEPTFFDRQMAFNLLAQVGTPDAQGHTLLEKRLVRELRQVLAKPLLKISATCVQAPVF FGDSFSVTLQSASAVDLEKVNAALEEAEGIELVEAGDYPTAVGDAVGQDVVYVGRVRAGVDEPSELNLWLTSDNVRKGAA LNAVQVAELLIKDLL
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=339, Percent_Identity=41.2979351032448, Blast_Score=237, Evalue=6e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: 1.2.1.11
Molecular weight: Translated: 35634; Mature: 35503
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTLDIAVIGATGTVGETLVQILEERDFPVGTLHLLASSESAGSSVLFRNKNVRVREVD CCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECC EFDFSKVKLAFFAAGPAITLSYAARAHAAGCSLVDLSGALPADQAPQVVPEANADVLAGL CCCCCCEEEEEEECCCCEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCC KAPFQVCSPSPSATTLAVVLAPLLDLIELHYVHVTANLAVSAQGREAVTELARQTAELLN CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHC MRPLEPTFFDRQMAFNLLAQVGTPDAQGHTLLEKRLVRELRQVLAKPLLKISATCVQAPV CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE FFGDSFSVTLQSASAVDLEKVNAALEEAEGIELVEAGDYPTAVGDAVGQDVVYVGRVRAG EECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCEEEEEHHHCC VDEPSELNLWLTSDNVRKGAALNAVQVAELLIKDLL CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TQTLDIAVIGATGTVGETLVQILEERDFPVGTLHLLASSESAGSSVLFRNKNVRVREVD CCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECC EFDFSKVKLAFFAAGPAITLSYAARAHAAGCSLVDLSGALPADQAPQVVPEANADVLAGL CCCCCCEEEEEEECCCCEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHCC KAPFQVCSPSPSATTLAVVLAPLLDLIELHYVHVTANLAVSAQGREAVTELARQTAELLN CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHHHHHC MRPLEPTFFDRQMAFNLLAQVGTPDAQGHTLLEKRLVRELRQVLAKPLLKISATCVQAPV CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE FFGDSFSVTLQSASAVDLEKVNAALEEAEGIELVEAGDYPTAVGDAVGQDVVYVGRVRAG EECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCEEEEEHHHCC VDEPSELNLWLTSDNVRKGAALNAVQVAELLIKDLL CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate 4-semialdehyde; phosphate; NADP+
Specific reaction: L-aspartate 4-semialdehyde + phosphate + NADP+ = L-4-aspartyl phosphate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9108283 [H]