| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is djlC [H]
Identifier: 77458112
GI number: 77458112
Start: 2149243
End: 2151948
Strand: Direct
Name: djlC [H]
Synonym: Pfl01_1885
Alternate gene names: 77458112
Gene position: 2149243-2151948 (Clockwise)
Preceding gene: 77458111
Following gene: 77458116
Centisome position: 33.38
GC content: 59.94
Gene sequence:
>2706_bases ATGAGTTGCTGGATTCGCCTGGGCATCGAGCCTACATCCGACGAAACCCTGATTCGCGATGCCTACCGCGCACGATTGCC GTCGCATCATCCGGAAACCGATCCTGAAGGATTTCAGGCGCTGCGCATGGCCTACGAAAACGCCTTGCGCCTGGCGCGTG AAGATGAGGAAGAAGCGCCCGAGGAAATAACTGAAAACTCAGGGCAGGAGGTTGTCGAGATCCCGCAGGCGTTCGCGGAT TTCTGCGAGTTGCTTGACGATCCCGCGCGACGTTTCAACTTCGAGGCGTGGCAGGCATTTGTCCGGGCGCTGGATGAGCT GTCGCTGGAACAGCTCGATGAACTCAGTTGGGGGCTCTACCACCGGATGGCCGATGCCGGCCCTCTGTCTTACCGCTGCG CGAATCTGTTGGCCAAGCGTATGGCGTGGCATCAGCAGTTACTGGATCTGGAGTTCAACGACGCGCATCGGGTGGGAGCC TTTTTGCAGCGAATCGAAACGCCTGACCCGTTCGATACCGATCTGATGAGCGCCTGGTCATTGGCTGCGCAGACCGAAAC ACTTTGGTACGCCCGCAGCCTCGACTTTATTTTCACCCAGCGTCCCCTCCATGAGTTCGCTGACTTCGCCAGTCAGCACA CGTGTCTGCCGTTGCCGGATGATGCTGCGTTCATGAAACGTTTGCTGGTGCAGTTCACCCAGGCGGGCATCGGTGCACCG ATATTTTTGCAGTGCTGTGTCGAAAAACAGCTGGAAGCACCGGATGACGTGGACTGGCTTTACCTGTTGGCGTGTCAGAG CAGTCTGCTGGGGCGGGACGATCAGGCATTGCCGTGCTGGATCAGGCTGTGGAACGAGTTCCGCCATCCGATGGCCGAAA GTCGTCTGCTGGAATTGTGCGCCAAGCGGCAACCGACTTTTCTGCCTCTGCTGATTCAGGCGTTCGATTGTCTGGGCGAT TTCTCCGAGTGGCCTGCGGATCTCGGGGATGACGCGCAGGTATACGGCAGTCCGTCACAACGCCCCGAGACGCTGAACCG TTGGTTGGGTGTCGGGCGGTTGAAGCTCGATAGCCTGGCGAAAAGTTTTGTCGATTGGCGCATGACAGGCGATGAGCTCC CGTTGCTTGCCCAACTGCTGGGTGAGAATGCCGACAGCAGGCTGCTGCAACTGTACCGGCATGCCTGGGCGCTGCATCGC GGTGATGCGGTCTTGCTGCAGCGGATTCTGGATCAGCCGCTCCCGGTCGATGCGCTTGAATGCCTGGTGTTGAGCGGGTT CAAAGTTCAGGCCGGACAACATCTGCGCTGGTTGGAGAATGCGCCGATTGCGCAGGCTATGAGTGTATTCAGCGAAGCGG ATTCAATATCGCAGCAATTGCCGCAGGCACTGACAACAGGCGAGCTGCAAAAGGTCTGTCGCCTGTGGTTGCGTCGCTTG CGGCCCTACAGTGACACCGCCCTGGAGCGCATCGCCGAAGCATTCAAATTGGGCGCCGTCAAAGACGACTGTGACTTGTC CGAGCTCGATCTGCTCCTTCAGTTGAGCCGTCGCGGGATAGGGTTGCCGCCGGTCGGGCTGGGCGAGGCTGCCTGGGAGT GGCACGCTCAAACCGTGTTTTTGCTGGCGTTGCTGGATCAGCCGGAGCGCTGGCTGCCAATGATCGATGGGCAGTGCCTG GAGCGTCTGCCGTTCAGTCCGGTTCATCCTTTGAGTCGACTGCAGCCACTGTTGCGGCGGTTGCAACGCGAGCAAGGCAA TTGCGACGGTTTACTGGGCTGGCTGCAAGGCAATGATCCGGTGCACGGCTTGCTGGTGCAGCAATTGTTCAGCGTGCAGC AGGCACTCGACAGCGCCCGATTGCCTGCCAATACCCTGCTTTACACCTGCATCGAGAGCGACCGCGCTGCGTGTGGCGAC GATCTGTTGGGGCTGTTGATGTTCTGGGGCGTGCTCTATCACGACCCGAGCCTGAGCGCCGAGCAGCATCGTGCCTTGCT GCAGTCCATCGCGGCAGTCAGTTGCGAGGATGACTGGTTCGAAGGGTTTCGTGACGGCTTGATCAAGGGCGAGCCGGTGT GGCCGCCGCGCAAGGTGTTGACGGATTTTGGGGTCGACAAACTGTTGGCATACGAGGCCCTCGATTCGCTCAAGGCCATG GTGCGCTATGGCGCTGCCGGAGTGCCGAAAACGCGAGTGCTGCGCCAATTGCAGCAGGGCAAGGATGACGTGAAGAACAG TATCGGCTTGCGCCTGGCGCTGTGTGCCTTGCTGTCCTGGTCGGAGCGTTTGATGTTGGCCAAAAGTGATGTTCAGCCGG TGCCGGCAGGGGCGATCTGGCGCCTGGGGTCGCGGCTGGGGCGCAAGGCTTTTATCGCCCAGGTCCTGGGGTGTGTGGTG ATTACGCCGGTGGCAGGATTGATCAGCGGTACCACATTCTTTGGCATTCTGATCCTGTTACTGGGTGTTCTGCTGTTATT CGGTGCCACTCTGCGCCGTTTGCATGATATGGGACGAGGCCTGCCCACATTGCTGATATTCATGGCCTTGTCGCCGGTCT TGCCGTTTCTGCCGCTGCTGCTGTTCGGCTTTCCCGGTGACAAGTTGCCCAACCGGTACGGGGTGCCACCGGACAGCGGC GGTGGCGAGGGTGGCGAGATGCTGTCCGGTGGTCTGCAGGCTGCTCTGCGGCGACTTAACGGTTAG
Upstream 100 bases:
>100_bases GCCTCGCCCAGAACATTCCGCACTTTCTGGCCGACCTGCCCTGGCACATGGAAATTGATTCGTTACCCCGTCCGGCATCG CTCAAGGAGTTCGACTGGTC
Downstream 100 bases:
>100_bases AGGCGCAGTTGATCCAGCGCCTTGTTGAGCTCTGAGCGGTGGCTGGCGATCTCGGCCGGCTGCTGTCCGCCGAGTACCGT GGTGAAGTTGTGCAGCCACT
Product: heat shock protein DnaJ-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 901; Mature: 900
Protein sequence:
>901_residues MSCWIRLGIEPTSDETLIRDAYRARLPSHHPETDPEGFQALRMAYENALRLAREDEEEAPEEITENSGQEVVEIPQAFAD FCELLDDPARRFNFEAWQAFVRALDELSLEQLDELSWGLYHRMADAGPLSYRCANLLAKRMAWHQQLLDLEFNDAHRVGA FLQRIETPDPFDTDLMSAWSLAAQTETLWYARSLDFIFTQRPLHEFADFASQHTCLPLPDDAAFMKRLLVQFTQAGIGAP IFLQCCVEKQLEAPDDVDWLYLLACQSSLLGRDDQALPCWIRLWNEFRHPMAESRLLELCAKRQPTFLPLLIQAFDCLGD FSEWPADLGDDAQVYGSPSQRPETLNRWLGVGRLKLDSLAKSFVDWRMTGDELPLLAQLLGENADSRLLQLYRHAWALHR GDAVLLQRILDQPLPVDALECLVLSGFKVQAGQHLRWLENAPIAQAMSVFSEADSISQQLPQALTTGELQKVCRLWLRRL RPYSDTALERIAEAFKLGAVKDDCDLSELDLLLQLSRRGIGLPPVGLGEAAWEWHAQTVFLLALLDQPERWLPMIDGQCL ERLPFSPVHPLSRLQPLLRRLQREQGNCDGLLGWLQGNDPVHGLLVQQLFSVQQALDSARLPANTLLYTCIESDRAACGD DLLGLLMFWGVLYHDPSLSAEQHRALLQSIAAVSCEDDWFEGFRDGLIKGEPVWPPRKVLTDFGVDKLLAYEALDSLKAM VRYGAAGVPKTRVLRQLQQGKDDVKNSIGLRLALCALLSWSERLMLAKSDVQPVPAGAIWRLGSRLGRKAFIAQVLGCVV ITPVAGLISGTTFFGILILLLGVLLLFGATLRRLHDMGRGLPTLLIFMALSPVLPFLPLLLFGFPGDKLPNRYGVPPDSG GGEGGEMLSGGLQAALRRLNG
Sequences:
>Translated_901_residues MSCWIRLGIEPTSDETLIRDAYRARLPSHHPETDPEGFQALRMAYENALRLAREDEEEAPEEITENSGQEVVEIPQAFAD FCELLDDPARRFNFEAWQAFVRALDELSLEQLDELSWGLYHRMADAGPLSYRCANLLAKRMAWHQQLLDLEFNDAHRVGA FLQRIETPDPFDTDLMSAWSLAAQTETLWYARSLDFIFTQRPLHEFADFASQHTCLPLPDDAAFMKRLLVQFTQAGIGAP IFLQCCVEKQLEAPDDVDWLYLLACQSSLLGRDDQALPCWIRLWNEFRHPMAESRLLELCAKRQPTFLPLLIQAFDCLGD FSEWPADLGDDAQVYGSPSQRPETLNRWLGVGRLKLDSLAKSFVDWRMTGDELPLLAQLLGENADSRLLQLYRHAWALHR GDAVLLQRILDQPLPVDALECLVLSGFKVQAGQHLRWLENAPIAQAMSVFSEADSISQQLPQALTTGELQKVCRLWLRRL RPYSDTALERIAEAFKLGAVKDDCDLSELDLLLQLSRRGIGLPPVGLGEAAWEWHAQTVFLLALLDQPERWLPMIDGQCL ERLPFSPVHPLSRLQPLLRRLQREQGNCDGLLGWLQGNDPVHGLLVQQLFSVQQALDSARLPANTLLYTCIESDRAACGD DLLGLLMFWGVLYHDPSLSAEQHRALLQSIAAVSCEDDWFEGFRDGLIKGEPVWPPRKVLTDFGVDKLLAYEALDSLKAM VRYGAAGVPKTRVLRQLQQGKDDVKNSIGLRLALCALLSWSERLMLAKSDVQPVPAGAIWRLGSRLGRKAFIAQVLGCVV ITPVAGLISGTTFFGILILLLGVLLLFGATLRRLHDMGRGLPTLLIFMALSPVLPFLPLLLFGFPGDKLPNRYGVPPDSG GGEGGEMLSGGLQAALRRLNG >Mature_900_residues SCWIRLGIEPTSDETLIRDAYRARLPSHHPETDPEGFQALRMAYENALRLAREDEEEAPEEITENSGQEVVEIPQAFADF CELLDDPARRFNFEAWQAFVRALDELSLEQLDELSWGLYHRMADAGPLSYRCANLLAKRMAWHQQLLDLEFNDAHRVGAF LQRIETPDPFDTDLMSAWSLAAQTETLWYARSLDFIFTQRPLHEFADFASQHTCLPLPDDAAFMKRLLVQFTQAGIGAPI FLQCCVEKQLEAPDDVDWLYLLACQSSLLGRDDQALPCWIRLWNEFRHPMAESRLLELCAKRQPTFLPLLIQAFDCLGDF SEWPADLGDDAQVYGSPSQRPETLNRWLGVGRLKLDSLAKSFVDWRMTGDELPLLAQLLGENADSRLLQLYRHAWALHRG DAVLLQRILDQPLPVDALECLVLSGFKVQAGQHLRWLENAPIAQAMSVFSEADSISQQLPQALTTGELQKVCRLWLRRLR PYSDTALERIAEAFKLGAVKDDCDLSELDLLLQLSRRGIGLPPVGLGEAAWEWHAQTVFLLALLDQPERWLPMIDGQCLE RLPFSPVHPLSRLQPLLRRLQREQGNCDGLLGWLQGNDPVHGLLVQQLFSVQQALDSARLPANTLLYTCIESDRAACGDD LLGLLMFWGVLYHDPSLSAEQHRALLQSIAAVSCEDDWFEGFRDGLIKGEPVWPPRKVLTDFGVDKLLAYEALDSLKAMV RYGAAGVPKTRVLRQLQQGKDDVKNSIGLRLALCALLSWSERLMLAKSDVQPVPAGAIWRLGSRLGRKAFIAQVLGCVVI TPVAGLISGTTFFGILILLLGVLLLFGATLRRLHDMGRGLPTLLIFMALSPVLPFLPLLLFGFPGDKLPNRYGVPPDSGG GEGGEMLSGGLQAALRRLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Escherichia coli, GI1786869, Length=315, Percent_Identity=34.6031746031746, Blast_Score=155, Evalue=1e-38, Organism=Escherichia coli, GI1786866, Length=324, Percent_Identity=32.4074074074074, Blast_Score=145, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001623 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100905; Mature: 100774
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCWIRLGIEPTSDETLIRDAYRARLPSHHPETDPEGFQALRMAYENALRLAREDEEEAP CCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCH EEITENSGQEVVEIPQAFADFCELLDDPARRFNFEAWQAFVRALDELSLEQLDELSWGLY HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HRMADAGPLSYRCANLLAKRMAWHQQLLDLEFNDAHRVGAFLQRIETPDPFDTDLMSAWS HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH LAAQTETLWYARSLDFIFTQRPLHEFADFASQHTCLPLPDDAAFMKRLLVQFTQAGIGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH IFLQCCVEKQLEAPDDVDWLYLLACQSSLLGRDDQALPCWIRLWNEFRHPMAESRLLELC HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH AKRQPTFLPLLIQAFDCLGDFSEWPADLGDDAQVYGSPSQRPETLNRWLGVGRLKLDSLA HHCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH KSFVDWRMTGDELPLLAQLLGENADSRLLQLYRHAWALHRGDAVLLQRILDQPLPVDALE HHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH CLVLSGFKVQAGQHLRWLENAPIAQAMSVFSEADSISQQLPQALTTGELQKVCRLWLRRL HHHHCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPYSDTALERIAEAFKLGAVKDDCDLSELDLLLQLSRRGIGLPPVGLGEAAWEWHAQTVF CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH LLALLDQPERWLPMIDGQCLERLPFSPVHPLSRLQPLLRRLQREQGNCDGLLGWLQGNDP HHHHHCCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC VHGLLVQQLFSVQQALDSARLPANTLLYTCIESDRAACGDDLLGLLMFWGVLYHDPSLSA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EQHRALLQSIAAVSCEDDWFEGFRDGLIKGEPVWPPRKVLTDFGVDKLLAYEALDSLKAM HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRYGAAGVPKTRVLRQLQQGKDDVKNSIGLRLALCALLSWSERLMLAKSDVQPVPAGAIW HHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RLGSRLGRKAFIAQVLGCVVITPVAGLISGTTFFGILILLLGVLLLFGATLRRLHDMGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPTLLIFMALSPVLPFLPLLLFGFPGDKLPNRYGVPPDSGGGEGGEMLSGGLQAALRRLN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC G C >Mature Secondary Structure SCWIRLGIEPTSDETLIRDAYRARLPSHHPETDPEGFQALRMAYENALRLAREDEEEAP CCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCH EEITENSGQEVVEIPQAFADFCELLDDPARRFNFEAWQAFVRALDELSLEQLDELSWGLY HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HRMADAGPLSYRCANLLAKRMAWHQQLLDLEFNDAHRVGAFLQRIETPDPFDTDLMSAWS HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH LAAQTETLWYARSLDFIFTQRPLHEFADFASQHTCLPLPDDAAFMKRLLVQFTQAGIGAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH IFLQCCVEKQLEAPDDVDWLYLLACQSSLLGRDDQALPCWIRLWNEFRHPMAESRLLELC HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH AKRQPTFLPLLIQAFDCLGDFSEWPADLGDDAQVYGSPSQRPETLNRWLGVGRLKLDSLA HHCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH KSFVDWRMTGDELPLLAQLLGENADSRLLQLYRHAWALHRGDAVLLQRILDQPLPVDALE HHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH CLVLSGFKVQAGQHLRWLENAPIAQAMSVFSEADSISQQLPQALTTGELQKVCRLWLRRL HHHHCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPYSDTALERIAEAFKLGAVKDDCDLSELDLLLQLSRRGIGLPPVGLGEAAWEWHAQTVF CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH LLALLDQPERWLPMIDGQCLERLPFSPVHPLSRLQPLLRRLQREQGNCDGLLGWLQGNDP HHHHHCCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC VHGLLVQQLFSVQQALDSARLPANTLLYTCIESDRAACGDDLLGLLMFWGVLYHDPSLSA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EQHRALLQSIAAVSCEDDWFEGFRDGLIKGEPVWPPRKVLTDFGVDKLLAYEALDSLKAM HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VRYGAAGVPKTRVLRQLQQGKDDVKNSIGLRLALCALLSWSERLMLAKSDVQPVPAGAIW HHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH RLGSRLGRKAFIAQVLGCVVITPVAGLISGTTFFGILILLLGVLLLFGATLRRLHDMGRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPTLLIFMALSPVLPFLPLLLFGFPGDKLPNRYGVPPDSGGGEGGEMLSGGLQAALRRLN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]