| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yfhM [H]
Identifier: 77458064
GI number: 77458064
Start: 2055323
End: 2056222
Strand: Reverse
Name: yfhM [H]
Synonym: Pfl01_1837
Alternate gene names: 77458064
Gene position: 2056222-2055323 (Counterclockwise)
Preceding gene: 77458065
Following gene: 77458062
Centisome position: 31.94
GC content: 62.11
Gene sequence:
>900_bases ATGACCCGAGCCGTGATGCAGTTTTGCAAGACTGAAAGTCTGACCATCGCCTATGAGCATCACGGCCCGGAAAACGGCAT GCCGGTCATTCTGCTTCACGGCTTCCCCTACTCTCCCCGCGCCTATGACGAAATCGCCCCAACCCTCGCCGCCCAAGGTT ATCGGGTGATCGTGCCGTACCTGCGCGGTTACGGCCCGACCCGTTTCAATAGCCCGGACACACTGCGCTCCGGCCAGCAA GCGGCGCTGGCGCAGGATCTGCTGGATCTGATGGATGCCCTGGGTATCGAGCAAGCGACATTGTGCGGTTACGACTGGGG TGGTCGGGCAGCGTGCATTGTGGCGGCGCTGTTTCCTGAGCGGGTGCGCGGGTTGGTGACAGGTGATGGCTACAACCTGC AGGACATTCCGAATTCGATCCAGCCGCTGGATCCGCAGAGCGAGCATCGCTACTGGTATCAGTATTACTTCCACACGCCC CGTGGCGTTGTAGGGCTGACGCAGAATCGTCGGGCGCTGTGCGAGTTGCTGTGGCAATTGTGGTCACCGACCTGGGCGCG GAACGCCGAGCGTTTTCCGCTGAGCGCGCCGGCGTTCGACAACCCGGATTTCGTCGAGGTGGTGATTCACTCTTATCGCC ATCGCTTCATGTATGCGCCGGGCGATCCGGCGCTGGAGGGGATGGAGCAGGCGCTGGAGAAACAACCGGCGATCGGCGTT CCGACGATTTCGCTGTGCGGTGCCGATGATGGCGTTGGCCCGGCGCCGGCGGACGATGACGATGCGCACCACTTCAACGG ACTTTACGAGCGGCGGGTGTTGGCGGGTGTCGGGCATAACATTCCCGAGGAAGCACCGGGCGAAACGCTCAAGGCATTAC TGGATCTGCTGCGGCACTGA
Upstream 100 bases:
>100_bases GTGCTGACCTGCTCGCGGACGAAAATGGTGGTGACATTTACGCCGGATCGCAGCAAGTATTTCAATCAGGTGGCGGAAGC CGAAACTTGAGGAATCCCGT
Downstream 100 bases:
>100_bases CCGAAAACCGCTCCCGATACGCCTGCGGCGTCACACCTATGGCTCGCAGGAAACTGCGTCTTAACGTCTCTTCACTGCCA AATCCACAATTGGCCGCCAC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTRAVMQFCKTESLTIAYEHHGPENGMPVILLHGFPYSPRAYDEIAPTLAAQGYRVIVPYLRGYGPTRFNSPDTLRSGQQ AALAQDLLDLMDALGIEQATLCGYDWGGRAACIVAALFPERVRGLVTGDGYNLQDIPNSIQPLDPQSEHRYWYQYYFHTP RGVVGLTQNRRALCELLWQLWSPTWARNAERFPLSAPAFDNPDFVEVVIHSYRHRFMYAPGDPALEGMEQALEKQPAIGV PTISLCGADDGVGPAPADDDDAHHFNGLYERRVLAGVGHNIPEEAPGETLKALLDLLRH
Sequences:
>Translated_299_residues MTRAVMQFCKTESLTIAYEHHGPENGMPVILLHGFPYSPRAYDEIAPTLAAQGYRVIVPYLRGYGPTRFNSPDTLRSGQQ AALAQDLLDLMDALGIEQATLCGYDWGGRAACIVAALFPERVRGLVTGDGYNLQDIPNSIQPLDPQSEHRYWYQYYFHTP RGVVGLTQNRRALCELLWQLWSPTWARNAERFPLSAPAFDNPDFVEVVIHSYRHRFMYAPGDPALEGMEQALEKQPAIGV PTISLCGADDGVGPAPADDDDAHHFNGLYERRVLAGVGHNIPEEAPGETLKALLDLLRH >Mature_298_residues TRAVMQFCKTESLTIAYEHHGPENGMPVILLHGFPYSPRAYDEIAPTLAAQGYRVIVPYLRGYGPTRFNSPDTLRSGQQA ALAQDLLDLMDALGIEQATLCGYDWGGRAACIVAALFPERVRGLVTGDGYNLQDIPNSIQPLDPQSEHRYWYQYYFHTPR GVVGLTQNRRALCELLWQLWSPTWARNAERFPLSAPAFDNPDFVEVVIHSYRHRFMYAPGDPALEGMEQALEKQPAIGVP TISLCGADDGVGPAPADDDDAHHFNGLYERRVLAGVGHNIPEEAPGETLKALLDLLRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=137, Percent_Identity=32.8467153284672, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.1.-.- [C]
Molecular weight: Translated: 33256; Mature: 33125
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAVMQFCKTESLTIAYEHHGPENGMPVILLHGFPYSPRAYDEIAPTLAAQGYRVIVPY CCHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEHH LRGYGPTRFNSPDTLRSGQQAALAQDLLDLMDALGIEQATLCGYDWGGRAACIVAALFPE HHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHH RVRGLVTGDGYNLQDIPNSIQPLDPQSEHRYWYQYYFHTPRGVVGLTQNRRALCELLWQL HHHEEECCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHH WSPTWARNAERFPLSAPAFDNPDFVEVVIHSYRHRFMYAPGDPALEGMEQALEKQPAIGV HCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCC PTISLCGADDGVGPAPADDDDAHHFNGLYERRVLAGVGHNIPEEAPGETLKALLDLLRH CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TRAVMQFCKTESLTIAYEHHGPENGMPVILLHGFPYSPRAYDEIAPTLAAQGYRVIVPY CHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEHH LRGYGPTRFNSPDTLRSGQQAALAQDLLDLMDALGIEQATLCGYDWGGRAACIVAALFPE HHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHH RVRGLVTGDGYNLQDIPNSIQPLDPQSEHRYWYQYYFHTPRGVVGLTQNRRALCELLWQL HHHEEECCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHH WSPTWARNAERFPLSAPAFDNPDFVEVVIHSYRHRFMYAPGDPALEGMEQALEKQPAIGV HCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCCCCC PTISLCGADDGVGPAPADDDDAHHFNGLYERRVLAGVGHNIPEEAPGETLKALLDLLRH CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]