| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458041
Identifier: 77458041
GI number: 77458041
Start: 2026564
End: 2027247
Strand: Reverse
Name: 77458041
Synonym: Pfl01_1814
Alternate gene names: NA
Gene position: 2027247-2026564 (Counterclockwise)
Preceding gene: 77458042
Following gene: 77458040
Centisome position: 31.49
GC content: 65.06
Gene sequence:
>684_bases ATGCTTGAACTGGCGCCACTGCTGGTGTCTGCGTTGATTCTCGGCCTGCTCGGCGGCGGGCATTGCCTGGGCATGTGCGG CGGTCTGATGGGCGCGCTGACTCTGGCGATTCCCAAGGAACAACGCAGCCGACGCTTTCGATTGCTGCTGGCTTATAACC TCGGGCGAATTCTCAGCTATGCCACGGCCGGTCTGCTGATCGGTCTTGCTGGATGGGCCGTAGCCAACAGCCCTGCCGCA TTGTTCATGCGGGTTCTGGCCGGGTTGCTGCTGATCGCCATGGGCCTGTATCTGGCGGGCTGGTGGAGCGGCCTGACCCG CATCGAAAGCCTCGGTCGCGGACTGTGGCGTTACATTCAACCTGTCGCCAATCGTCTGCTGCCGGTGTCGAGCCTGCCCC GCGCCCTGCTGCTTGGCGCGCTGTGGGGCTGGCTGCCGTGCGGGCTGGTTTACAGCACGTTGTTGTGGTCGGCCAGCCAG GGCAATGCACTCGACAGCGCCTTACTGATGCTGGCCTTCGGCCTCGGCACCTGGCCGGTATTACTGGCGACCGGCCTCGC GGCCGAGCGTGTAACGACACTGTTGCGCAAACGCAGCGTGCGCATGGCCGGCGGCTTGCTGGTGATCCTGTTCGGCATCT GGACCCTGCCGGGGCCGCACCAGCACTGGCTGATGGGCCACTGA
Upstream 100 bases:
>100_bases GGCCCGGCCCACAGCATCCTGTTCGACGACCAGGACCCGAACCACACCGCCGCTGTGGACGAAGCCAACCCGGCCAAACC GGACGACAAGGCGCCACCCC
Downstream 100 bases:
>100_bases TCCCGTTGATGCAAATCAAGATGCCTTTTCGCGCCCTCCCCTAGACTCGGCACACTGCCAGCCTATCCGGGGGAATGCCC GCATGCTCGACGCCATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MLELAPLLVSALILGLLGGGHCLGMCGGLMGALTLAIPKEQRSRRFRLLLAYNLGRILSYATAGLLIGLAGWAVANSPAA LFMRVLAGLLLIAMGLYLAGWWSGLTRIESLGRGLWRYIQPVANRLLPVSSLPRALLLGALWGWLPCGLVYSTLLWSASQ GNALDSALLMLAFGLGTWPVLLATGLAAERVTTLLRKRSVRMAGGLLVILFGIWTLPGPHQHWLMGH
Sequences:
>Translated_227_residues MLELAPLLVSALILGLLGGGHCLGMCGGLMGALTLAIPKEQRSRRFRLLLAYNLGRILSYATAGLLIGLAGWAVANSPAA LFMRVLAGLLLIAMGLYLAGWWSGLTRIESLGRGLWRYIQPVANRLLPVSSLPRALLLGALWGWLPCGLVYSTLLWSASQ GNALDSALLMLAFGLGTWPVLLATGLAAERVTTLLRKRSVRMAGGLLVILFGIWTLPGPHQHWLMGH >Mature_227_residues MLELAPLLVSALILGLLGGGHCLGMCGGLMGALTLAIPKEQRSRRFRLLLAYNLGRILSYATAGLLIGLAGWAVANSPAA LFMRVLAGLLLIAMGLYLAGWWSGLTRIESLGRGLWRYIQPVANRLLPVSSLPRALLLGALWGWLPCGLVYSTLLWSASQ GNALDSALLMLAFGLGTWPVLLATGLAAERVTTLLRKRSVRMAGGLLVILFGIWTLPGPHQHWLMGH
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24312; Mature: 24312
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELAPLLVSALILGLLGGGHCLGMCGGLMGALTLAIPKEQRSRRFRLLLAYNLGRILSY CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ATAGLLIGLAGWAVANSPAALFMRVLAGLLLIAMGLYLAGWWSGLTRIESLGRGLWRYIQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVANRLLPVSSLPRALLLGALWGWLPCGLVYSTLLWSASQGNALDSALLMLAFGLGTWPV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH LLATGLAAERVTTLLRKRSVRMAGGLLVILFGIWTLPGPHQHWLMGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLELAPLLVSALILGLLGGGHCLGMCGGLMGALTLAIPKEQRSRRFRLLLAYNLGRILSY CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ATAGLLIGLAGWAVANSPAALFMRVLAGLLLIAMGLYLAGWWSGLTRIESLGRGLWRYIQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVANRLLPVSSLPRALLLGALWGWLPCGLVYSTLLWSASQGNALDSALLMLAFGLGTWPV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH LLATGLAAERVTTLLRKRSVRMAGGLLVILFGIWTLPGPHQHWLMGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA