| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457900
Identifier: 77457900
GI number: 77457900
Start: 1866127
End: 1866468
Strand: Direct
Name: 77457900
Synonym: Pfl01_1673
Alternate gene names: NA
Gene position: 1866127-1866468 (Clockwise)
Preceding gene: 77457899
Following gene: 77457901
Centisome position: 28.98
GC content: 60.53
Gene sequence:
>342_bases ATGGATATTCAGATAATTGCACGCGATGGCGAACCCGAATATGCGGTTCTGCCATGGGCTCAGTATCAGGCTCTACTGAA AGCAGCAGGCATTAACGAAGCACCGTCGCAACCGGCTCCAGCGCCGCTTGCGGCAACCCCGGACCCGATTCTTCCAGGTC TGGATCAGTTACGCAGTTTGCGCGAAGGGAAGGGCATCGCCATCGAGGCGCTGGCCCGCACGGTAGGCATCAGCCCGTCT TACCTGGCCATGATCGAAAGTGGCGAGCGTCTGCCCGACGCAGCGATTCGCCGCAGCCTGGCCTGGGAGTTGACGGTGCC AGGGTGGAGGGAACAATCGTGA
Upstream 100 bases:
>100_bases TTATTCAGATAGATACCCCCCACGACCTTGGCCGCTGTTAGGATTACACTTCTAGGGAAAAGTGCCGACTCGCTAAGTGT TGTTGTCCTACGGGGTAGTC
Downstream 100 bases:
>100_bases GCGTACGCATCAGTCGTCAACATTGGGACGGATTGCTGGGGGAGCTGGATCAGGCGCGCAGGCAGCGCCATCTTTTGACT TATCGAGCCTTGCTTGAACG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Cro/CI Family Transcriptional Regulator; Transcriptional Regulator
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MDIQIIARDGEPEYAVLPWAQYQALLKAAGINEAPSQPAPAPLAATPDPILPGLDQLRSLREGKGIAIEALARTVGISPS YLAMIESGERLPDAAIRRSLAWELTVPGWREQS
Sequences:
>Translated_113_residues MDIQIIARDGEPEYAVLPWAQYQALLKAAGINEAPSQPAPAPLAATPDPILPGLDQLRSLREGKGIAIEALARTVGISPS YLAMIESGERLPDAAIRRSLAWELTVPGWREQS >Mature_113_residues MDIQIIARDGEPEYAVLPWAQYQALLKAAGINEAPSQPAPAPLAATPDPILPGLDQLRSLREGKGIAIEALARTVGISPS YLAMIESGERLPDAAIRRSLAWELTVPGWREQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12169; Mature: 12169
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQIIARDGEPEYAVLPWAQYQALLKAAGINEAPSQPAPAPLAATPDPILPGLDQLRSL CCEEEEEECCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH REGKGIAIEALARTVGISPSYLAMIESGERLPDAAIRRSLAWELTVPGWREQS HCCCCEEHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHEEEEECCCCCCCC >Mature Secondary Structure MDIQIIARDGEPEYAVLPWAQYQALLKAAGINEAPSQPAPAPLAATPDPILPGLDQLRSL CCEEEEEECCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH REGKGIAIEALARTVGISPSYLAMIESGERLPDAAIRRSLAWELTVPGWREQS HCCCCEEHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA