| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457897
Identifier: 77457897
GI number: 77457897
Start: 1862458
End: 1864275
Strand: Reverse
Name: 77457897
Synonym: Pfl01_1670
Alternate gene names: NA
Gene position: 1864275-1862458 (Counterclockwise)
Preceding gene: 77457905
Following gene: 77457896
Centisome position: 28.96
GC content: 61.11
Gene sequence:
>1818_bases ATGTTTATCTTGCGCCTCTTATACCGTGTGTTGACGCTGATCGTGTTGCTGCTGGGACTGGCTCTGGCGGTGGTTGTTTA CTATGTCGCCAATCCGAGATTGCCCTTCCCCGCACCTGCAAAACAGGTGCATTACCTGAACCAGTGGACTGAGCAAGAGC GCCAGACCTACTACTTCACCCCGCAGGGAACGCAGGTCAAAGGCCTGCACTATGAATGGTTCCAGGCGCTGGAGCTGCCG TTCTCGCAGCAACGCTTTGCCTCCCCGGAATACCTCGCGCGCTTCGGCTTTCTGATCGATCCGCAGCAAAAAGCCACGCC GGACAACCCGGGGAATCTGCCGGTGGGTTTCGCCCGGCACCAGAATCCCGGCAGCTCCGAGCAATATCTCGACATCACTT GCGCGGCCTGCCACACCGGGGAACTGCACTTCAATGGCCAGGCAGTGCGCATCGACGGCGGTTCGGCCCAGCATGTTCTG CCTTCCAGCGTTCCTACATTGCGCGGCGGCAGTTTCGGACAGGCATTGGTCGCCAGTCTCGCCTCGACCTACTACAACCC ATGGAAATTCGAGCGCTTCGCCCGCCACGTGCTGGGCAATGACTACGAAGCACGCCACGAACAACTGCGCAAAGAATTCA AAAGCTCACTGAACACCTTCATCAAAGTGGCCTGGAACGACACTCACCGTGGCCTCTACCCCACCGAAGAAGGCCCGGGC CGCACCGATGCCTTCGGGCGTATCGCCAACGCGACCTTCGGCGATGCGATATCCCCAAACAATTACCGCGTGGCCAATGC CCCGGTGGATTACCCACAGCTGTGGGACATGTGGACCTTCGACTGGGTGCAGTGGAACGGCTCGGCGCAACAACCGATGG CGCGCAATATCGGCGAGGCTTTGGGCGTCGGTGCCACGCTGAATTTCTTCGACGCCAACGGCCAGCCGCTGCAAGGCGAT GAGCGCTATGCCTCCAGCGTACGTGTGCGTGATCTGCACAAGATCGAAGAAACCCTGCAAAGACTGCGACCGCCGGCATG GCCTGAGGAGTTGCTCGGCGTCGTCGACAGACCCTTGGCAGCGAAGGGGCGAGCCCTGTTCGCCGAGAATTGCGCCGGAT GCCACGTCCCGCGTCAAACCCAGGAAGGCGAGCGTTGGGTGCAACACCTGCACATGCTCCCGGTGGACGTTATCGGCACC GACCCGAACGCCGCCAACAACATCGCCAATCACCGTTTCGACCTGACCGCTCTGCAATGGAACCCGGCGGAACTCGAACA AATGGACGTGAAGTTGCACCCCAAACCCAAGGAGCCGCTGGACCTCAGCCAGTTGTCAGTGGCCAAGGGACTGGCTTACG TCACCGCCTTCGTGGAAAACCGTGCATACCGTGAAGCGGGCGTCACCGCTGCCGAGAAACCACAGCTCGATGGCTTCGGT CTGCCGATCGGCGTTCGCGAAAAAGTCGCCTACAAAGCGCGTCCGCTCGCCGGCGTATGGGCCACGGCCCCATTCCTGCA CAACGGCTCGGTGCCGAGCCTTTATCAGTTGCTGTCGCCTCAGGACGAGCGCGCCACCACCTTCTATAAAGGCACCTTCG AATACGACCCGCGCCATCTGGGCTATCGCACCGAAGCTTTCACCAACGGTTTCCTGTTCGACACCCGCATCACCGGCAAC CACAACAGCGGCCACGAATTTCGCGCCGGCGAACGCGGCAACGGCGTCATCGGCCGACTGCTGCAGCCAGAAGAGCGCTG GGCGCTGCTCGAATACCTGAAAGTGCTGGGCGGCCCGCTGGAGGCGCAACTGCCATGA
Upstream 100 bases:
>100_bases CGCCGACAGTGATTGATGCCGCTTCCCACAACACTTGGCGTAATGGCCACTTGCCGCACACGACCTGGCTCAGGCATAAC AGCGCAACAACTCGACAAGG
Downstream 100 bases:
>100_bases TCTTCAATTCCTTCAAAAGACCTTCGATGCTGGCGCGTTTCTGGCTCTGGCTGGGACGGTTACTGGGTAAAACCCTGCTG ATCCTGCTGGTGATCGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MFILRLLYRVLTLIVLLLGLALAVVVYYVANPRLPFPAPAKQVHYLNQWTEQERQTYYFTPQGTQVKGLHYEWFQALELP FSQQRFASPEYLARFGFLIDPQQKATPDNPGNLPVGFARHQNPGSSEQYLDITCAACHTGELHFNGQAVRIDGGSAQHVL PSSVPTLRGGSFGQALVASLASTYYNPWKFERFARHVLGNDYEARHEQLRKEFKSSLNTFIKVAWNDTHRGLYPTEEGPG RTDAFGRIANATFGDAISPNNYRVANAPVDYPQLWDMWTFDWVQWNGSAQQPMARNIGEALGVGATLNFFDANGQPLQGD ERYASSVRVRDLHKIEETLQRLRPPAWPEELLGVVDRPLAAKGRALFAENCAGCHVPRQTQEGERWVQHLHMLPVDVIGT DPNAANNIANHRFDLTALQWNPAELEQMDVKLHPKPKEPLDLSQLSVAKGLAYVTAFVENRAYREAGVTAAEKPQLDGFG LPIGVREKVAYKARPLAGVWATAPFLHNGSVPSLYQLLSPQDERATTFYKGTFEYDPRHLGYRTEAFTNGFLFDTRITGN HNSGHEFRAGERGNGVIGRLLQPEERWALLEYLKVLGGPLEAQLP
Sequences:
>Translated_605_residues MFILRLLYRVLTLIVLLLGLALAVVVYYVANPRLPFPAPAKQVHYLNQWTEQERQTYYFTPQGTQVKGLHYEWFQALELP FSQQRFASPEYLARFGFLIDPQQKATPDNPGNLPVGFARHQNPGSSEQYLDITCAACHTGELHFNGQAVRIDGGSAQHVL PSSVPTLRGGSFGQALVASLASTYYNPWKFERFARHVLGNDYEARHEQLRKEFKSSLNTFIKVAWNDTHRGLYPTEEGPG RTDAFGRIANATFGDAISPNNYRVANAPVDYPQLWDMWTFDWVQWNGSAQQPMARNIGEALGVGATLNFFDANGQPLQGD ERYASSVRVRDLHKIEETLQRLRPPAWPEELLGVVDRPLAAKGRALFAENCAGCHVPRQTQEGERWVQHLHMLPVDVIGT DPNAANNIANHRFDLTALQWNPAELEQMDVKLHPKPKEPLDLSQLSVAKGLAYVTAFVENRAYREAGVTAAEKPQLDGFG LPIGVREKVAYKARPLAGVWATAPFLHNGSVPSLYQLLSPQDERATTFYKGTFEYDPRHLGYRTEAFTNGFLFDTRITGN HNSGHEFRAGERGNGVIGRLLQPEERWALLEYLKVLGGPLEAQLP >Mature_605_residues MFILRLLYRVLTLIVLLLGLALAVVVYYVANPRLPFPAPAKQVHYLNQWTEQERQTYYFTPQGTQVKGLHYEWFQALELP FSQQRFASPEYLARFGFLIDPQQKATPDNPGNLPVGFARHQNPGSSEQYLDITCAACHTGELHFNGQAVRIDGGSAQHVL PSSVPTLRGGSFGQALVASLASTYYNPWKFERFARHVLGNDYEARHEQLRKEFKSSLNTFIKVAWNDTHRGLYPTEEGPG RTDAFGRIANATFGDAISPNNYRVANAPVDYPQLWDMWTFDWVQWNGSAQQPMARNIGEALGVGATLNFFDANGQPLQGD ERYASSVRVRDLHKIEETLQRLRPPAWPEELLGVVDRPLAAKGRALFAENCAGCHVPRQTQEGERWVQHLHMLPVDVIGT DPNAANNIANHRFDLTALQWNPAELEQMDVKLHPKPKEPLDLSQLSVAKGLAYVTAFVENRAYREAGVTAAEKPQLDGFG LPIGVREKVAYKARPLAGVWATAPFLHNGSVPSLYQLLSPQDERATTFYKGTFEYDPRHLGYRTEAFTNGFLFDTRITGN HNSGHEFRAGERGNGVIGRLLQPEERWALLEYLKVLGGPLEAQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67942; Mature: 67942
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFILRLLYRVLTLIVLLLGLALAVVVYYVANPRLPFPAPAKQVHYLNQWTEQERQTYYFT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEC PQGTQVKGLHYEWFQALELPFSQQRFASPEYLARFGFLIDPQQKATPDNPGNLPVGFARH CCCCEEECCHHHHHHHHCCCCCHHHCCCHHHHHHHCCEECCHHHCCCCCCCCCCEEECCC QNPGSSEQYLDITCAACHTGELHFNGQAVRIDGGSAQHVLPSSVPTLRGGSFGQALVASL CCCCCCCCEEEEEEEEEECCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH ASTYYNPWKFERFARHVLGNDYEARHEQLRKEFKSSLNTFIKVAWNDTHRGLYPTEEGPG HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC RTDAFGRIANATFGDAISPNNYRVANAPVDYPQLWDMWTFDWVQWNGSAQQPMARNIGEA CCHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHCCCEEEEEEECCCCCCCHHHHHHHH LGVGATLNFFDANGQPLQGDERYASSVRVRDLHKIEETLQRLRPPAWPEELLGVVDRPLA HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCH AKGRALFAENCAGCHVPRQTQEGERWVQHLHMLPVDVIGTDPNAANNIANHRFDLTALQW HCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHCCEEEEEEEEC NPAELEQMDVKLHPKPKEPLDLSQLSVAKGLAYVTAFVENRAYREAGVTAAEKPQLDGFG CHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPIGVREKVAYKARPLAGVWATAPFLHNGSVPSLYQLLSPQDERATTFYKGTFEYDPRHL CCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECEECCCCHHC GYRTEAFTNGFLFDTRITGNHNSGHEFRAGERGNGVIGRLLQPEERWALLEYLKVLGGPL CCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCC EAQLP CCCCC >Mature Secondary Structure MFILRLLYRVLTLIVLLLGLALAVVVYYVANPRLPFPAPAKQVHYLNQWTEQERQTYYFT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEC PQGTQVKGLHYEWFQALELPFSQQRFASPEYLARFGFLIDPQQKATPDNPGNLPVGFARH CCCCEEECCHHHHHHHHCCCCCHHHCCCHHHHHHHCCEECCHHHCCCCCCCCCCEEECCC QNPGSSEQYLDITCAACHTGELHFNGQAVRIDGGSAQHVLPSSVPTLRGGSFGQALVASL CCCCCCCCEEEEEEEEEECCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH ASTYYNPWKFERFARHVLGNDYEARHEQLRKEFKSSLNTFIKVAWNDTHRGLYPTEEGPG HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC RTDAFGRIANATFGDAISPNNYRVANAPVDYPQLWDMWTFDWVQWNGSAQQPMARNIGEA CCHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHCCCEEEEEEECCCCCCCHHHHHHHH LGVGATLNFFDANGQPLQGDERYASSVRVRDLHKIEETLQRLRPPAWPEELLGVVDRPLA HCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCH AKGRALFAENCAGCHVPRQTQEGERWVQHLHMLPVDVIGTDPNAANNIANHRFDLTALQW HCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHCCEEEEEEEEC NPAELEQMDVKLHPKPKEPLDLSQLSVAKGLAYVTAFVENRAYREAGVTAAEKPQLDGFG CHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPIGVREKVAYKARPLAGVWATAPFLHNGSVPSLYQLLSPQDERATTFYKGTFEYDPRHL CCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECEECCCCHHC GYRTEAFTNGFLFDTRITGNHNSGHEFRAGERGNGVIGRLLQPEERWALLEYLKVLGGPL CCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCC EAQLP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]