| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457891
Identifier: 77457891
GI number: 77457891
Start: 1854884
End: 1856035
Strand: Direct
Name: 77457891
Synonym: Pfl01_1664
Alternate gene names: NA
Gene position: 1854884-1856035 (Clockwise)
Preceding gene: 77457890
Following gene: 77457892
Centisome position: 28.81
GC content: 62.24
Gene sequence:
>1152_bases ATGATTTGCCCCAATAGCGTCAAACCCGGCATCAAGCCATTCAGCCAGCTTCAGCACCCGCGTGAAGTGATCCGCCAATT CACCCCGAACTGGTTCGCCGCCACCATGGGCACCGGCGTGCTGGCGTTGGCGCTGGCGCAATTGCCGGTGTCCATTCCCG GCCTGCGCGCGGTGGCCGAAGGGCTGTGGCTGTTCAACATTCTGTTGTTCGTGCTGTTTACCGCTGCCTACGCCGCCCGC TGGATTCTGTTCTTCGACGAGGCGCGGCGGATCTTCGGCCACTCCACGGTTTCGATGTTCTTCGGCACCATTCCCATGGG CCTGGCAACCATCATCAACGGCTTTCTGCTGTTCGGTCTGCCGCGCTGGGGCGACGGCGTGATTCAGCTTGCCGAGGTGT TGTGGTGGCTGGACGTGGGGATGTCGCTGGCCTGCGGTGTGTTGATCCCCTACATGATGTTTACCCGTCAGGAACATAGC ATCGATCAGATGACCGCCGTCTGGCTGCTGCCGGTGGTGGCGGCAGAAGTGGCCGCGGCCAGCGGTGGACTGCTGGTGCC GCATCTCGCTGATGCGCACTCGCAACTGGTGGTGCTGGTGACCAGTTACGTGCTCTGGGCCTTTTCCCTGCCAGTGGCGT TCAGCATCCTGACCATCCTCTTGCTGCGCATGGCCTTGCACAAACTGCCCCACGAAAACATGGCAGCCTCGAGCTGGCTG GCCTTGGGGCCAATCGGCACCGGCGCCCTGGGCATGTTGCTGCTGGGTGGCGACGCCCCGGCGATCTTCACGGCCAACGG TCTGCCGGGCATCGGCGAAATGGCGTCGGGCCTGGGCCTGGTCGCCGGGATCACGCTGTGGGGCTTCGGTCTGTGGTGGA TGTTGATGGCGCTGCTGATCACTTTGCGTTACCTGCGTGACGGCATTCCGTTCAACCTCGGCTGGTGGGGCTTCACCTTC CCGTTGGGTGTGTATTCGCTGGCAACCCTGAAACTGGGCAGCACCTTGCACCTGACGTTCTTCAGTGTGGCCGGTTGTGT GCTGGTGGCGTTGCTGGCGGTGATGTGGCTGATCGTCGGCAAACGCACGCTGCAAGGTGCGTGGCGCGGCGAGCTGTTTG TTTCACCGTGCATTGCAGGTTTGAAGAAATAA
Upstream 100 bases:
>100_bases TATCTACAAAACAGATAACAGTTAGAGATATTACCCGTTATATAGATATTCGATTCAGTTCTACCATGGACTCAACCTCA CCTGAGGACAGGAGTTCATG
Downstream 100 bases:
>100_bases CCTGCGAAGATTAGGTAATGTGTGGCCTGGATCGCGGTTCAAGATTCTTATAAGCGTAGCCAGGCCACTGACTACCTTCT CTTTCCAAAAACAACAGGGT
Product: C4-dicarboxylate transporter/malic acid transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MICPNSVKPGIKPFSQLQHPREVIRQFTPNWFAATMGTGVLALALAQLPVSIPGLRAVAEGLWLFNILLFVLFTAAYAAR WILFFDEARRIFGHSTVSMFFGTIPMGLATIINGFLLFGLPRWGDGVIQLAEVLWWLDVGMSLACGVLIPYMMFTRQEHS IDQMTAVWLLPVVAAEVAAASGGLLVPHLADAHSQLVVLVTSYVLWAFSLPVAFSILTILLLRMALHKLPHENMAASSWL ALGPIGTGALGMLLLGGDAPAIFTANGLPGIGEMASGLGLVAGITLWGFGLWWMLMALLITLRYLRDGIPFNLGWWGFTF PLGVYSLATLKLGSTLHLTFFSVAGCVLVALLAVMWLIVGKRTLQGAWRGELFVSPCIAGLKK
Sequences:
>Translated_383_residues MICPNSVKPGIKPFSQLQHPREVIRQFTPNWFAATMGTGVLALALAQLPVSIPGLRAVAEGLWLFNILLFVLFTAAYAAR WILFFDEARRIFGHSTVSMFFGTIPMGLATIINGFLLFGLPRWGDGVIQLAEVLWWLDVGMSLACGVLIPYMMFTRQEHS IDQMTAVWLLPVVAAEVAAASGGLLVPHLADAHSQLVVLVTSYVLWAFSLPVAFSILTILLLRMALHKLPHENMAASSWL ALGPIGTGALGMLLLGGDAPAIFTANGLPGIGEMASGLGLVAGITLWGFGLWWMLMALLITLRYLRDGIPFNLGWWGFTF PLGVYSLATLKLGSTLHLTFFSVAGCVLVALLAVMWLIVGKRTLQGAWRGELFVSPCIAGLKK >Mature_383_residues MICPNSVKPGIKPFSQLQHPREVIRQFTPNWFAATMGTGVLALALAQLPVSIPGLRAVAEGLWLFNILLFVLFTAAYAAR WILFFDEARRIFGHSTVSMFFGTIPMGLATIINGFLLFGLPRWGDGVIQLAEVLWWLDVGMSLACGVLIPYMMFTRQEHS IDQMTAVWLLPVVAAEVAAASGGLLVPHLADAHSQLVVLVTSYVLWAFSLPVAFSILTILLLRMALHKLPHENMAASSWL ALGPIGTGALGMLLLGGDAPAIFTANGLPGIGEMASGLGLVAGITLWGFGLWWMLMALLITLRYLRDGIPFNLGWWGFTF PLGVYSLATLKLGSTLHLTFFSVAGCVLVALLAVMWLIVGKRTLQGAWRGELFVSPCIAGLKK
Specific function: Unknown
COG id: COG1275
COG function: function code P; Tellurite resistance protein and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325165, Length=417, Percent_Identity=23.7410071942446, Blast_Score=88, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004695 - InterPro: IPR011552 [H]
Pfam domain/function: PF03595 C4dic_mal_tran [H]
EC number: NA
Molecular weight: Translated: 41503; Mature: 41503
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICPNSVKPGIKPFSQLQHPREVIRQFTPNWFAATMGTGVLALALAQLPVSIPGLRAVAE CCCCCCCCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GLWLFNILLFVLFTAAYAARWILFFDEARRIFGHSTVSMFFGTIPMGLATIINGFLLFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRWGDGVIQLAEVLWWLDVGMSLACGVLIPYMMFTRQEHSIDQMTAVWLLPVVAAEVAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC SGGLLVPHLADAHSQLVVLVTSYVLWAFSLPVAFSILTILLLRMALHKLPHENMAASSWL CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC ALGPIGTGALGMLLLGGDAPAIFTANGLPGIGEMASGLGLVAGITLWGFGLWWMLMALLI EECCCCCHHHHHEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRYLRDGIPFNLGWWGFTFPLGVYSLATLKLGSTLHLTFFSVAGCVLVALLAVMWLIVG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KRTLQGAWRGELFVSPCIAGLKK HHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MICPNSVKPGIKPFSQLQHPREVIRQFTPNWFAATMGTGVLALALAQLPVSIPGLRAVAE CCCCCCCCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH GLWLFNILLFVLFTAAYAARWILFFDEARRIFGHSTVSMFFGTIPMGLATIINGFLLFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRWGDGVIQLAEVLWWLDVGMSLACGVLIPYMMFTRQEHSIDQMTAVWLLPVVAAEVAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC SGGLLVPHLADAHSQLVVLVTSYVLWAFSLPVAFSILTILLLRMALHKLPHENMAASSWL CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC ALGPIGTGALGMLLLGGDAPAIFTANGLPGIGEMASGLGLVAGITLWGFGLWWMLMALLI EECCCCCHHHHHEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRYLRDGIPFNLGWWGFTFPLGVYSLATLKLGSTLHLTFFSVAGCVLVALLAVMWLIVG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KRTLQGAWRGELFVSPCIAGLKK HHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]