| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457867
Identifier: 77457867
GI number: 77457867
Start: 1831376
End: 1832008
Strand: Reverse
Name: 77457867
Synonym: Pfl01_1640
Alternate gene names: NA
Gene position: 1832008-1831376 (Counterclockwise)
Preceding gene: 77457882
Following gene: 77457866
Centisome position: 28.45
GC content: 61.14
Gene sequence:
>633_bases ATGCTTTTTGACTGCAGAGAGCACATCACAATAACAAGGGAGAGCACCATGCAAGGCATGATCATCAGCAATCCGCGGCT GGAATTCCTGCGCCCGGTGCTGGAACGCTGGTTTGACTGTATCGACCGCTACAACGCCGTGCGCGGCGACAATGACACAC CTTATTGGCACGACGAAAAAGCCAACCTCGGCCTGCTGTCGGCCGCTGCGTGGATGGCCGAACTGGTCACCCTGCGCGAC ACTGCCACCCGCAAACAGAATGAAGAAGGCGAGCGCAACGCCCGCGCCGATTTGTTTATTGCTGGCGCCGAGGATCGCGC CTTCATTCAGGCGACCCAACGCTGGCCGCGCGTCACCAGCCTGAATCTGACGCAGGCCCTGGCGGATATCACCAGCGACG CCAGGCGCATCAGCTACGCCAGCGACCTGAAACTCGGCTGCCTGTTCGTCGCCCCGCAAAAAGCCCAGCACAGCGCCAGC CCGGAAGAGTTGCAGGACATGGTCGACGACCTGCAAAAGGAACACACCTGCGCCGTCGCCTGGTACTTTCCCTACGCCTA CCGCAAATTGCGCAGCGAAGCCGGCAACTATCACCCCGGCGTTGCCGTGCTGTTCAAGGAAGCCCGCGGCTGA
Upstream 100 bases:
>100_bases AGCGTCAATTGAAGAGGGGCTTGTGCGGCGAATAACTGCCGCCGATCAATTAACTGACGCCAATCTTGTGCCACACTGCC ATGAGTGATATCAAAGAGCC
Downstream 100 bases:
>100_bases GGGTTGAACCATCGGGCTTGTGCGCTTCTCTATGATTAGGAATGCATTCATAGGGAAGATCAGCAATGCGCAAGCCCCAG TTCGTTTTCGTCATCATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLFDCREHITITRESTMQGMIISNPRLEFLRPVLERWFDCIDRYNAVRGDNDTPYWHDEKANLGLLSAAAWMAELVTLRD TATRKQNEEGERNARADLFIAGAEDRAFIQATQRWPRVTSLNLTQALADITSDARRISYASDLKLGCLFVAPQKAQHSAS PEELQDMVDDLQKEHTCAVAWYFPYAYRKLRSEAGNYHPGVAVLFKEARG
Sequences:
>Translated_210_residues MLFDCREHITITRESTMQGMIISNPRLEFLRPVLERWFDCIDRYNAVRGDNDTPYWHDEKANLGLLSAAAWMAELVTLRD TATRKQNEEGERNARADLFIAGAEDRAFIQATQRWPRVTSLNLTQALADITSDARRISYASDLKLGCLFVAPQKAQHSAS PEELQDMVDDLQKEHTCAVAWYFPYAYRKLRSEAGNYHPGVAVLFKEARG >Mature_210_residues MLFDCREHITITRESTMQGMIISNPRLEFLRPVLERWFDCIDRYNAVRGDNDTPYWHDEKANLGLLSAAAWMAELVTLRD TATRKQNEEGERNARADLFIAGAEDRAFIQATQRWPRVTSLNLTQALADITSDARRISYASDLKLGCLFVAPQKAQHSAS PEELQDMVDDLQKEHTCAVAWYFPYAYRKLRSEAGNYHPGVAVLFKEARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24013; Mature: 24013
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFDCREHITITRESTMQGMIISNPRLEFLRPVLERWFDCIDRYNAVRGDNDTPYWHDEK CCCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ANLGLLSAAAWMAELVTLRDTATRKQNEEGERNARADLFIAGAEDRAFIQATQRWPRVTS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC LNLTQALADITSDARRISYASDLKLGCLFVAPQKAQHSASPEELQDMVDDLQKEHTCAVA CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHHCEEEEE WYFPYAYRKLRSEAGNYHPGVAVLFKEARG EHHHHHHHHHHHHCCCCCCCCEEEEECCCC >Mature Secondary Structure MLFDCREHITITRESTMQGMIISNPRLEFLRPVLERWFDCIDRYNAVRGDNDTPYWHDEK CCCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ANLGLLSAAAWMAELVTLRDTATRKQNEEGERNARADLFIAGAEDRAFIQATQRWPRVTS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC LNLTQALADITSDARRISYASDLKLGCLFVAPQKAQHSASPEELQDMVDDLQKEHTCAVA CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHHCEEEEE WYFPYAYRKLRSEAGNYHPGVAVLFKEARG EHHHHHHHHHHHHCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA