| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457848
Identifier: 77457848
GI number: 77457848
Start: 1813459
End: 1813860
Strand: Direct
Name: 77457848
Synonym: Pfl01_1621
Alternate gene names: NA
Gene position: 1813459-1813860 (Clockwise)
Preceding gene: 77457847
Following gene: 77457850
Centisome position: 28.17
GC content: 55.47
Gene sequence:
>402_bases ATGAGTATTCCGTTCTGGTGTGTGTTTATCAGTGCATTGTTGATCTACGTGGCGCGCATGCCGGTCGGCAGGGCCATGAA AGAGCAGGGCGGTTACAACAACCACTTGCCGCGTCAGCAGCAGGCGCAACTCACCGGTTATGGGGCCCGGGCGCTGGCGG CCCACCAGAACAGCATCGAAGCGTTCATCCTGTTCGCCGTTGGCGTGCTGATGGCACACACCACGCAGACGGCGGGATGG CTGATCGATACACTGGCGATCATCTTTGTGATCTCACGGATTTTCTATCTGTGGTTCTACCTGGCGGATATTCCCAAGCT GCGCAGTCTGGTCTGGCTGGTCGGCTTAGTGTGTTCATTGTTGCTGATGATTAGTCCGACTTTTAGAACCGTCTTGCTCT AA
Upstream 100 bases:
>100_bases TGGTGTTGTATCGCCGGGAGTTTCATTCCGACGTGCTCGATGTAATGGTCTATACCCCTACAGAGGCGCCATTGCCCGAA GCGAACAAAGAGGCTGCTTG
Downstream 100 bases:
>100_bases GCCGGCATGGGCAAAAAATCACAGGCAAAAGAAAACCCGTACTTGGCGGGTTTTCTTTTTGGCCAGCGAGAAGCGGCTTA TTGCTTCTTGGCAGCTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSIPFWCVFISALLIYVARMPVGRAMKEQGGYNNHLPRQQQAQLTGYGARALAAHQNSIEAFILFAVGVLMAHTTQTAGW LIDTLAIIFVISRIFYLWFYLADIPKLRSLVWLVGLVCSLLLMISPTFRTVLL
Sequences:
>Translated_133_residues MSIPFWCVFISALLIYVARMPVGRAMKEQGGYNNHLPRQQQAQLTGYGARALAAHQNSIEAFILFAVGVLMAHTTQTAGW LIDTLAIIFVISRIFYLWFYLADIPKLRSLVWLVGLVCSLLLMISPTFRTVLL >Mature_132_residues SIPFWCVFISALLIYVARMPVGRAMKEQGGYNNHLPRQQQAQLTGYGARALAAHQNSIEAFILFAVGVLMAHTTQTAGWL IDTLAIIFVISRIFYLWFYLADIPKLRSLVWLVGLVCSLLLMISPTFRTVLL
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14974; Mature: 14843
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPFWCVFISALLIYVARMPVGRAMKEQGGYNNHLPRQQQAQLTGYGARALAAHQNSIE CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH AFILFAVGVLMAHTTQTAGWLIDTLAIIFVISRIFYLWFYLADIPKLRSLVWLVGLVCSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMISPTFRTVLL HHHHCHHHHHHCC >Mature Secondary Structure SIPFWCVFISALLIYVARMPVGRAMKEQGGYNNHLPRQQQAQLTGYGARALAAHQNSIE CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH AFILFAVGVLMAHTTQTAGWLIDTLAIIFVISRIFYLWFYLADIPKLRSLVWLVGLVCSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLMISPTFRTVLL HHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA