| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is opuAC [H]
Identifier: 77457833
GI number: 77457833
Start: 1793822
End: 1794673
Strand: Direct
Name: opuAC [H]
Synonym: Pfl01_1606
Alternate gene names: 77457833
Gene position: 1793822-1794673 (Clockwise)
Preceding gene: 77457831
Following gene: 77457834
Centisome position: 27.86
GC content: 58.57
Gene sequence:
>852_bases ATGAAGATGCGACGACTTTTAGGCGCAGGTGCCGCTCTGGTACTTGCGATGAGCTCCACTTTCGCCAGCGCTGAAAAACA GACCCTGAACATCGGTTACGTTGACGGCTGGTCCGACAGCGTCGCGACCACTCACGTGGCAGCCGAAGTGATCAAGCAGA AACTCGGCTACGACGTGAAACTGCAGGCCGTCGCCACCGGCATCATGTGGCAGGGCGTTGCCACCGGCAAACTCGACGCC ATGCTCTCGGCCTGGCTGCCAGTGACCCACGGCGAATACTGGACCAAGAACAAGGATCAGGTCGTCGATTACGGCCCGAA CTTCAAGGACGCGAAAATCGGTCTGATCGTGCCGGAGTACGTCAAGGCCAAGACCATCGAAGACCTGAAAACCGACGACT CCTTCAAGAATCGCATCGTCGGCATCGATGCCGGTTCGGGCGTGATGCTCAAGACCGATCAGGCGATCAAGGATTACGGC CTCGACAAATACACCCTCAAGGCCAGTTCCGGCGCCGGCATGATTGCCGAGCTGACTCGCGCCGAGAAGAAAAACGAATC CATCGCCGTCACCGGCTGGGTGCCGCACTGGATGTTCGCCAAGTGGAAACTGCGCTTCCTCGACGACCCGAAAGGCGTGT ATGGCGCGGCTGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCGACCAAGGCGCCGGAAGTGGCCAAGTTCCTGAAG AACTTCCAGTGGGCTTCGAAAGACGAAATCGGCGAAGTCATGCTGGCAATTCAGGACGGTGCAAAACCTGACGCAGCGGC CAAGGATTGGGTTGCCAAGCACCCTGAGCGTGTTGCCGACTGGACCAAGTGA
Upstream 100 bases:
>100_bases TAACGAGTTTGCGGTCAGGCGTGATGGGGGCGCTGTGCACCATAACAATACGTTGACGATGCCCGGCATCCGCCGGGCGC AGCATTTCGGGGAAGTAACG
Downstream 100 bases:
>100_bases TTTAAGCCGAAGCGTCTAATCTGCGCTTCCCAGGGCCGCCCGACATGACCGTCGGGCGGCCTTTTTTGTTTGTCCTCTAT TAATAGGCAGCGTTGGCCGT
Product: glycine betaine ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDA MLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEYVKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYG LDKYTLKASSGAGMIAELTRAEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK
Sequences:
>Translated_283_residues MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDA MLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEYVKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYG LDKYTLKASSGAGMIAELTRAEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK >Mature_283_residues MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDA MLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEYVKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYG LDKYTLKASSGAGMIAELTRAEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK
Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]
COG id: COG2113
COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 30930; Mature: 30930
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVK CCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE LQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEY EHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECHHH VKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYGLDKYTLKASSGAGMIAELTR HHHHHHHHHCCCCCHHCEEEEEECCCCEEEECCHHHHHCCCCEEEEECCCCCCHHHHHHH AEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK HHCCCCCEEEEECCCHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHH NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK HCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVK CCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE LQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEY EHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECHHH VKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYGLDKYTLKASSGAGMIAELTR HHHHHHHHHCCCCCHHCEEEEEECCCCEEEECCHHHHHCCCCEEEEECCCCCCHHHHHHH AEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK HHCCCCCEEEEECCCHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHH NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK HCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7622480; 8969502; 9384377 [H]