Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is opuAC [H]

Identifier: 77457833

GI number: 77457833

Start: 1793822

End: 1794673

Strand: Direct

Name: opuAC [H]

Synonym: Pfl01_1606

Alternate gene names: 77457833

Gene position: 1793822-1794673 (Clockwise)

Preceding gene: 77457831

Following gene: 77457834

Centisome position: 27.86

GC content: 58.57

Gene sequence:

>852_bases
ATGAAGATGCGACGACTTTTAGGCGCAGGTGCCGCTCTGGTACTTGCGATGAGCTCCACTTTCGCCAGCGCTGAAAAACA
GACCCTGAACATCGGTTACGTTGACGGCTGGTCCGACAGCGTCGCGACCACTCACGTGGCAGCCGAAGTGATCAAGCAGA
AACTCGGCTACGACGTGAAACTGCAGGCCGTCGCCACCGGCATCATGTGGCAGGGCGTTGCCACCGGCAAACTCGACGCC
ATGCTCTCGGCCTGGCTGCCAGTGACCCACGGCGAATACTGGACCAAGAACAAGGATCAGGTCGTCGATTACGGCCCGAA
CTTCAAGGACGCGAAAATCGGTCTGATCGTGCCGGAGTACGTCAAGGCCAAGACCATCGAAGACCTGAAAACCGACGACT
CCTTCAAGAATCGCATCGTCGGCATCGATGCCGGTTCGGGCGTGATGCTCAAGACCGATCAGGCGATCAAGGATTACGGC
CTCGACAAATACACCCTCAAGGCCAGTTCCGGCGCCGGCATGATTGCCGAGCTGACTCGCGCCGAGAAGAAAAACGAATC
CATCGCCGTCACCGGCTGGGTGCCGCACTGGATGTTCGCCAAGTGGAAACTGCGCTTCCTCGACGACCCGAAAGGCGTGT
ATGGCGCGGCTGAAACCGTGAACAGCATCGGCAGCAAGGAACTGGCGACCAAGGCGCCGGAAGTGGCCAAGTTCCTGAAG
AACTTCCAGTGGGCTTCGAAAGACGAAATCGGCGAAGTCATGCTGGCAATTCAGGACGGTGCAAAACCTGACGCAGCGGC
CAAGGATTGGGTTGCCAAGCACCCTGAGCGTGTTGCCGACTGGACCAAGTGA

Upstream 100 bases:

>100_bases
TAACGAGTTTGCGGTCAGGCGTGATGGGGGCGCTGTGCACCATAACAATACGTTGACGATGCCCGGCATCCGCCGGGCGC
AGCATTTCGGGGAAGTAACG

Downstream 100 bases:

>100_bases
TTTAAGCCGAAGCGTCTAATCTGCGCTTCCCAGGGCCGCCCGACATGACCGTCGGGCGGCCTTTTTTGTTTGTCCTCTAT
TAATAGGCAGCGTTGGCCGT

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDA
MLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEYVKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYG
LDKYTLKASSGAGMIAELTRAEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK
NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK

Sequences:

>Translated_283_residues
MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDA
MLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEYVKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYG
LDKYTLKASSGAGMIAELTRAEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK
NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK
>Mature_283_residues
MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDA
MLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEYVKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYG
LDKYTLKASSGAGMIAELTRAEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK
NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 30930; Mature: 30930

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVK
CCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
LQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEY
EHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECHHH
VKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYGLDKYTLKASSGAGMIAELTR
HHHHHHHHHCCCCCHHCEEEEEECCCCEEEECCHHHHHCCCCEEEEECCCCCCHHHHHHH
AEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK
HHCCCCCEEEEECCCHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHH
NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK
HCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MKMRRLLGAGAALVLAMSSTFASAEKQTLNIGYVDGWSDSVATTHVAAEVIKQKLGYDVK
CCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEE
LQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWTKNKDQVVDYGPNFKDAKIGLIVPEY
EHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECHHH
VKAKTIEDLKTDDSFKNRIVGIDAGSGVMLKTDQAIKDYGLDKYTLKASSGAGMIAELTR
HHHHHHHHHCCCCCHHCEEEEEECCCCEEEECCHHHHHCCCCEEEEECCCCCCHHHHHHH
AEKKNESIAVTGWVPHWMFAKWKLRFLDDPKGVYGAAETVNSIGSKELATKAPEVAKFLK
HHCCCCCEEEEECCCHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHH
NFQWASKDEIGEVMLAIQDGAKPDAAAKDWVAKHPERVADWTK
HCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]