| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457801
Identifier: 77457801
GI number: 77457801
Start: 1763241
End: 1764746
Strand: Reverse
Name: 77457801
Synonym: Pfl01_1574
Alternate gene names: NA
Gene position: 1764746-1763241 (Counterclockwise)
Preceding gene: 77457802
Following gene: 77457784
Centisome position: 27.41
GC content: 57.17
Gene sequence:
>1506_bases ATGTCTCCACTGTCAAATCTGACAGTAGACATCCCGCACTCTGGAGCGCTTAGATGCCTGATCTCCTGTCACTCAGAAGC GGCTGAGGAGGCGCATCCCGAGATGATCAGAAAATCAGCAAAGGTTGATGGTACAGGGCCACAAAACCCCGTCGCAGAAG ACGAGCTGCTCGTTCTGGGCGCACGCGCCTGTCATCGAGTGGTCGGCACCTTTCGCTCCAACAGCTACAGACTTGTGTCT CTGAACGCCCGGACCCTTGAGCCAATTGAGGCTGTCTGGCAATACGAAGATCACGATCAATCTGTAACGGGAATCGATTT CTTTGATACCAACCCCTCGCCCCCCCTGCTTGTCACCTCGGGGAAGCAGAGGCTGGTCCTCTCCCGTTCGAACATCATTG GCAACTTCCCTGCCCTGTGCGCTCTTCGTAATGATCAAAAACTGCACGCATGGGGCTGGGGGGAAAATGGCGGTAATTTG CCTCCCCGACTGGCCTGCCTCAGGGATATTCGCGAAGTGGCATCTTCCATGGCCGCTTTTGCGGTCAGGCGCGCAAAAGG GAACGTCCTGGCCTGGGGCAGCGCTGGAAATCCCAGCTCCTGCGTCCCCGAGGAGATTGCAAAGCGAACCGACATTGTCG CTCTGTACGGAGGGGCCTATGCATTTGCGGCACTCCTGTCCACGGGAAATCTCGTGACATGGGGATTAAAGGAAACGGGA GGGGATCTTCCAGACAGGATTGCCCGACTCTCCGACATTGTGCATGTCCAGGGATCAGAGTTTGCATTTGCAGCCATACG CAAGAATGGTCACGTGGTGACTTGGGGCCACCCGGATTATGGCGGTGCTTTGCCTGATGACATCGGCAAGATGAGCGGTG TCGTTCAATTGGCAAGCAGCGGCTTCGCTTACGCCCTGCGCCGCGATGACGGAAGTGTTGCCGTCTGGGGCCGTATTGCC CCCATGCCTGAACGTATTGCCGGGTTGAGGGACATTGTCGATATACAGGGTAATGCGGGTGCATTCGCAGTACGTCAGGC GAGTGGCCAAGTTGATGGCTGGGGAGACTTCACCTGGGATACGCCTCCCGCCCCCATTACTGAATACAGAGACATCGTGC ATTTTAGTCCGACATCGGATGGTTTTGTGGTACTGCGCGCCAATGGTCAGGTGGATGCATGGGGAGCCGGCGCGGCTGCC AACGTGCCGGATACGATCAAAGCGCTGACAGATGTGGTGGGGATAAGTACCAATCATGAGGCAGCCGTCGCCTTACGCAG CAACGGGGAAGCCGTCGCCTGGGGAGACCCTGAGGCAGGCGGTGACAGCAGCAACGTTGCTCCTCTGCTTCAAAACGTAC GGGCTGTCTATGGAGGGACTCGAACATTCGTCGCACTGAGGGAGGATGCAAGAGTAGTGGCTTGGGGTGACGCACACAAA GGTGGCACCGGCGAACAAAAAGCACTCTACCGACGGATCGCTTACTCAAGGAAGGTTGCGCCTTGA
Upstream 100 bases:
>100_bases GTCAGGACCAGCCTGCAGCAGAGTCGGAAAAGGATGTAACCGATCGCGGAGATGATTACCTCGCACGCTGAGCCATCGCG CGCCCTCACACCCCAACCTT
Downstream 100 bases:
>100_bases CCAGGAAGGGGCCTGGCACTCAATCATGGCGATAACGAGATGACGGAAAAAATCGCAGCGTTCGTCAGCGCCTACAGGGA TCGAACACCTCTGTAGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSPLSNLTVDIPHSGALRCLISCHSEAAEEAHPEMIRKSAKVDGTGPQNPVAEDELLVLGARACHRVVGTFRSNSYRLVS LNARTLEPIEAVWQYEDHDQSVTGIDFFDTNPSPPLLVTSGKQRLVLSRSNIIGNFPALCALRNDQKLHAWGWGENGGNL PPRLACLRDIREVASSMAAFAVRRAKGNVLAWGSAGNPSSCVPEEIAKRTDIVALYGGAYAFAALLSTGNLVTWGLKETG GDLPDRIARLSDIVHVQGSEFAFAAIRKNGHVVTWGHPDYGGALPDDIGKMSGVVQLASSGFAYALRRDDGSVAVWGRIA PMPERIAGLRDIVDIQGNAGAFAVRQASGQVDGWGDFTWDTPPAPITEYRDIVHFSPTSDGFVVLRANGQVDAWGAGAAA NVPDTIKALTDVVGISTNHEAAVALRSNGEAVAWGDPEAGGDSSNVAPLLQNVRAVYGGTRTFVALREDARVVAWGDAHK GGTGEQKALYRRIAYSRKVAP
Sequences:
>Translated_501_residues MSPLSNLTVDIPHSGALRCLISCHSEAAEEAHPEMIRKSAKVDGTGPQNPVAEDELLVLGARACHRVVGTFRSNSYRLVS LNARTLEPIEAVWQYEDHDQSVTGIDFFDTNPSPPLLVTSGKQRLVLSRSNIIGNFPALCALRNDQKLHAWGWGENGGNL PPRLACLRDIREVASSMAAFAVRRAKGNVLAWGSAGNPSSCVPEEIAKRTDIVALYGGAYAFAALLSTGNLVTWGLKETG GDLPDRIARLSDIVHVQGSEFAFAAIRKNGHVVTWGHPDYGGALPDDIGKMSGVVQLASSGFAYALRRDDGSVAVWGRIA PMPERIAGLRDIVDIQGNAGAFAVRQASGQVDGWGDFTWDTPPAPITEYRDIVHFSPTSDGFVVLRANGQVDAWGAGAAA NVPDTIKALTDVVGISTNHEAAVALRSNGEAVAWGDPEAGGDSSNVAPLLQNVRAVYGGTRTFVALREDARVVAWGDAHK GGTGEQKALYRRIAYSRKVAP >Mature_500_residues SPLSNLTVDIPHSGALRCLISCHSEAAEEAHPEMIRKSAKVDGTGPQNPVAEDELLVLGARACHRVVGTFRSNSYRLVSL NARTLEPIEAVWQYEDHDQSVTGIDFFDTNPSPPLLVTSGKQRLVLSRSNIIGNFPALCALRNDQKLHAWGWGENGGNLP PRLACLRDIREVASSMAAFAVRRAKGNVLAWGSAGNPSSCVPEEIAKRTDIVALYGGAYAFAALLSTGNLVTWGLKETGG DLPDRIARLSDIVHVQGSEFAFAAIRKNGHVVTWGHPDYGGALPDDIGKMSGVVQLASSGFAYALRRDDGSVAVWGRIAP MPERIAGLRDIVDIQGNAGAFAVRQASGQVDGWGDFTWDTPPAPITEYRDIVHFSPTSDGFVVLRANGQVDAWGAGAAAN VPDTIKALTDVVGISTNHEAAVALRSNGEAVAWGDPEAGGDSSNVAPLLQNVRAVYGGTRTFVALREDARVVAWGDAHKG GTGEQKALYRRIAYSRKVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53355; Mature: 53224
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLSNLTVDIPHSGALRCLISCHSEAAEEAHPEMIRKSAKVDGTGPQNPVAEDELLVLG CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE ARACHRVVGTFRSNSYRLVSLNARTLEPIEAVWQYEDHDQSVTGIDFFDTNPSPPLLVTS HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEC GKQRLVLSRSNIIGNFPALCALRNDQKLHAWGWGENGGNLPPRLACLRDIREVASSMAAF CCCEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH AVRRAKGNVLAWGSAGNPSSCVPEEIAKRTDIVALYGGAYAFAALLSTGNLVTWGLKETG HHHHCCCCEEEECCCCCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHCCCEEEECCHHCC GDLPDRIARLSDIVHVQGSEFAFAAIRKNGHVVTWGHPDYGGALPDDIGKMSGVVQLASS CCHHHHHHHHHHHEEECCCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCC GFAYALRRDDGSVAVWGRIAPMPERIAGLRDIVDIQGNAGAFAVRQASGQVDGWGDFTWD CEEEEEEECCCCEEEEEECCCCHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCC TPPAPITEYRDIVHFSPTSDGFVVLRANGQVDAWGAGAAANVPDTIKALTDVVGISTNHE CCCCCHHHHHHEEEECCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCC AAVALRSNGEAVAWGDPEAGGDSSNVAPLLQNVRAVYGGTRTFVALREDARVVAWGDAHK EEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCC GGTGEQKALYRRIAYSRKVAP CCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPLSNLTVDIPHSGALRCLISCHSEAAEEAHPEMIRKSAKVDGTGPQNPVAEDELLVLG CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE ARACHRVVGTFRSNSYRLVSLNARTLEPIEAVWQYEDHDQSVTGIDFFDTNPSPPLLVTS HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEC GKQRLVLSRSNIIGNFPALCALRNDQKLHAWGWGENGGNLPPRLACLRDIREVASSMAAF CCCEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH AVRRAKGNVLAWGSAGNPSSCVPEEIAKRTDIVALYGGAYAFAALLSTGNLVTWGLKETG HHHHCCCCEEEECCCCCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHCCCEEEECCHHCC GDLPDRIARLSDIVHVQGSEFAFAAIRKNGHVVTWGHPDYGGALPDDIGKMSGVVQLASS CCHHHHHHHHHHHEEECCCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCC GFAYALRRDDGSVAVWGRIAPMPERIAGLRDIVDIQGNAGAFAVRQASGQVDGWGDFTWD CEEEEEEECCCCEEEEEECCCCHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCC TPPAPITEYRDIVHFSPTSDGFVVLRANGQVDAWGAGAAANVPDTIKALTDVVGISTNHE CCCCCHHHHHHEEEECCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCC AAVALRSNGEAVAWGDPEAGGDSSNVAPLLQNVRAVYGGTRTFVALREDARVVAWGDAHK EEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCC GGTGEQKALYRRIAYSRKVAP CCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA