Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is fliJ [C]

Identifier: 77457767

GI number: 77457767

Start: 1729354

End: 1729803

Strand: Direct

Name: fliJ [C]

Synonym: Pfl01_1540

Alternate gene names: 77457767

Gene position: 1729354-1729803 (Clockwise)

Preceding gene: 77457766

Following gene: 77457768

Centisome position: 26.86

GC content: 61.33

Gene sequence:

>450_bases
ATGGCCCTGAGTCGCGCCGCGCGTCTGGCGCCGGTGGTGGACATGGCCGAAAAGGCCGAAAAAACCGCCGTGCAGCGCTT
GGGTTATTTTCAGGGGCAGGTGAAAGTCGCCGAGAGCAAACTCGCCGACCTCAACGCCTTTCGTCTGGATTACTCGCAGC
AGTGGATCGTGCGCGGCAGCACCGGTGTGACCGGTCAATGGCTGCTGGGTTTTCAGGGCTTTCTGGCGCAACTCGACACC
GCCGTCGATCAGCAGCGCCAAAGTCTGCAGTGGCACCAGAACAATCTGGACAAGGCCCGTGATGCCTGGCAACAGGCATT
CGCCCGGGTCGAAGGTCTGCGCAAACTTGTACAACGCTACCGCGACGAAGCCCAGCGTGCCGAAGACAAGCGCGAACAGA
AGCTGCTCGACGAGTTGTCCCAGCGTTTGCCGCGCCACGAGGCATTTTGA

Upstream 100 bases:

>100_bases
CAGATACCTGCGTCAGGGGCTCAACGACAAAATCAGCCTGGGTGAAAGCGAGGCGTACCTCGAAACGATTTTCGCCCCGG
CGGCCGGCGGGTAACCGGTC

Downstream 100 bases:

>100_bases
CGGGCAGATCTCGCACAAATCCCGACGCCATCGCACCTTGCCCATGGCCCCTCCAAGTGCTAAACCTTGTACAGGTTCGT
CAATGACAAGGAAGCCAGTA

Product: flagellar biosynthesis chaperone

Products: NA

Alternate protein names: Flagellar Protein FliJ

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGSTGVTGQWLLGFQGFLAQLDT
AVDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRYRDEAQRAEDKREQKLLDELSQRLPRHEAF

Sequences:

>Translated_149_residues
MALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGSTGVTGQWLLGFQGFLAQLDT
AVDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRYRDEAQRAEDKREQKLLDELSQRLPRHEAF
>Mature_148_residues
ALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGSTGVTGQWLLGFQGFLAQLDTA
VDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRYRDEAQRAEDKREQKLLDELSQRLPRHEAF

Specific function: The Flij Protein Is A Flagellar Protein That Affects Chemotactic Events. Mutations In Flij Results In Failure To Respond To Chemotactic Stimuli. [C]

COG id: COG2882

COG function: function code NUO; Flagellar biosynthesis chaperone

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17200; Mature: 17068

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECC
TGVTGQWLLGFQGFLAQLDTAVDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDEAQRAEDKREQKLLDELSQRLPRHEAF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECC
TGVTGQWLLGFQGFLAQLDTAVDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDEAQRAEDKREQKLLDELSQRLPRHEAF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA