| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fliJ [C]
Identifier: 77457767
GI number: 77457767
Start: 1729354
End: 1729803
Strand: Direct
Name: fliJ [C]
Synonym: Pfl01_1540
Alternate gene names: 77457767
Gene position: 1729354-1729803 (Clockwise)
Preceding gene: 77457766
Following gene: 77457768
Centisome position: 26.86
GC content: 61.33
Gene sequence:
>450_bases ATGGCCCTGAGTCGCGCCGCGCGTCTGGCGCCGGTGGTGGACATGGCCGAAAAGGCCGAAAAAACCGCCGTGCAGCGCTT GGGTTATTTTCAGGGGCAGGTGAAAGTCGCCGAGAGCAAACTCGCCGACCTCAACGCCTTTCGTCTGGATTACTCGCAGC AGTGGATCGTGCGCGGCAGCACCGGTGTGACCGGTCAATGGCTGCTGGGTTTTCAGGGCTTTCTGGCGCAACTCGACACC GCCGTCGATCAGCAGCGCCAAAGTCTGCAGTGGCACCAGAACAATCTGGACAAGGCCCGTGATGCCTGGCAACAGGCATT CGCCCGGGTCGAAGGTCTGCGCAAACTTGTACAACGCTACCGCGACGAAGCCCAGCGTGCCGAAGACAAGCGCGAACAGA AGCTGCTCGACGAGTTGTCCCAGCGTTTGCCGCGCCACGAGGCATTTTGA
Upstream 100 bases:
>100_bases CAGATACCTGCGTCAGGGGCTCAACGACAAAATCAGCCTGGGTGAAAGCGAGGCGTACCTCGAAACGATTTTCGCCCCGG CGGCCGGCGGGTAACCGGTC
Downstream 100 bases:
>100_bases CGGGCAGATCTCGCACAAATCCCGACGCCATCGCACCTTGCCCATGGCCCCTCCAAGTGCTAAACCTTGTACAGGTTCGT CAATGACAAGGAAGCCAGTA
Product: flagellar biosynthesis chaperone
Products: NA
Alternate protein names: Flagellar Protein FliJ
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGSTGVTGQWLLGFQGFLAQLDT AVDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRYRDEAQRAEDKREQKLLDELSQRLPRHEAF
Sequences:
>Translated_149_residues MALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGSTGVTGQWLLGFQGFLAQLDT AVDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRYRDEAQRAEDKREQKLLDELSQRLPRHEAF >Mature_148_residues ALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGSTGVTGQWLLGFQGFLAQLDTA VDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRYRDEAQRAEDKREQKLLDELSQRLPRHEAF
Specific function: The Flij Protein Is A Flagellar Protein That Affects Chemotactic Events. Mutations In Flij Results In Failure To Respond To Chemotactic Stimuli. [C]
COG id: COG2882
COG function: function code NUO; Flagellar biosynthesis chaperone
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17200; Mature: 17068
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECC TGVTGQWLLGFQGFLAQLDTAVDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RDEAQRAEDKREQKLLDELSQRLPRHEAF HHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALSRAARLAPVVDMAEKAEKTAVQRLGYFQGQVKVAESKLADLNAFRLDYSQQWIVRGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECC TGVTGQWLLGFQGFLAQLDTAVDQQRQSLQWHQNNLDKARDAWQQAFARVEGLRKLVQRY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RDEAQRAEDKREQKLLDELSQRLPRHEAF HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA