| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fliH [C]
Identifier: 77457765
GI number: 77457765
Start: 1727193
End: 1727999
Strand: Direct
Name: fliH [C]
Synonym: Pfl01_1538
Alternate gene names: 77457765
Gene position: 1727193-1727999 (Clockwise)
Preceding gene: 77457764
Following gene: 77457766
Centisome position: 26.83
GC content: 62.95
Gene sequence:
>807_bases ATGGACAAGCATGACGACGATGTGACGGACCTGATCCGTGCCCGGGACGTCCGCGGTTTCGAATCTTGGGCGTTGCCCAG CTTCGACCCGCCGAAACCTGAGCCCGAGCCGGAACCGGAGCCTGAACCGCCGGAAATGGAAGAGGTGCCGCTGGAGGAAG TCCAGCCACTGACGCTGGAAGAGCTCGAAAGCATCCGTCAGGAGGCCTACAACGAGGGCTTCGCCATCGGTGAAAAGGAA GGCTTTCACAGCGCCACCCTCAAGGTGCGCCAGGAAGCCGAAGTGGTCCTGACGGCCAAGGTCGAGAGCCTTGAGCAATT GATGGCGCACCTGTTCGAGCCCATCGCCGAGCAAGACACCCAGATCGAAAAGTCGCTGGTCGACCTCGTGCAGCACATCG CCAAACAGGTGATTCAGCGCGAACTGGCCATCGACTCGACGCAGATCGAACACGTCATGCGCGACGCGCTGAAGCTGTTG CCGCTGGGCGTGGGCAATGTGCGGCTGTACGTCAATCCGCAGGATTTCGAACAGGTCAAAGCCCTGCGCGAACGTCATGA GGAAACCTGGCGCATCGTCGAGGACGAATCCCTGCTGCCGGGCGGTTGCCGGGTCGAGACCGACCACAGCCGGATCGATG CCAGCATCGAAACCCGCGTCAGCCAGGTCATGGCCAAGCTGTTCGACCAGTTGCACGAACAGGCCCTGCACCCGGCCGAG CCGGACCTGAGCCTGGACCTGCCGGAAACACCCAAACCGGCACCGGTCGCAGAAGAGCCGCTCGCGGACGCCCCCGATGC GCCTTGA
Upstream 100 bases:
>100_bases GAGACCGCACAGAAGGAAATCCTCACCATCGCCCGCCGTATGGCCGAAGCCGGAGAAATCGTGCTCGGTGGCAAGGGCGG CGAGGAAATGATCTAAGCCC
Downstream 100 bases:
>100_bases ACGCACCAGCTTCGCCAAGCGCCTGAGCACTTACGCCGAGGCCACCGAAATCGCCGGTGCGCCGATCCTCGAAGGGCGCC TTTTGCGCATGGTCGGCTTG
Product: flagellar assembly protein H
Products: NA
Alternate protein names: Flagellar Assembly Protein FliH; Flagellar Assembly Protein; Polar Flagellar Assembly Protein FliH
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLEELESIRQEAYNEGFAIGEKE GFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDTQIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLL PLGVGNVRLYVNPQDFEQVKALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE PDLSLDLPETPKPAPVAEEPLADAPDAP
Sequences:
>Translated_268_residues MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLEELESIRQEAYNEGFAIGEKE GFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDTQIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLL PLGVGNVRLYVNPQDFEQVKALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE PDLSLDLPETPKPAPVAEEPLADAPDAP >Mature_268_residues MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLEELESIRQEAYNEGFAIGEKE GFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDTQIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLL PLGVGNVRLYVNPQDFEQVKALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE PDLSLDLPETPKPAPVAEEPLADAPDAP
Specific function: Needed For Flagellar Regrowth And Assembly. [C]
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082004, Length=216, Percent_Identity=26.8518518518519, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30293; Mature: 30293
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLE CCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHH ELESIRQEAYNEGFAIGEKEGFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDT HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLLPLGVGNVRLYVNPQDFEQVK HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH ALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE HHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PDLSLDLPETPKPAPVAEEPLADAPDAP CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLE CCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHH ELESIRQEAYNEGFAIGEKEGFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDT HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLLPLGVGNVRLYVNPQDFEQVK HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH ALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE HHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PDLSLDLPETPKPAPVAEEPLADAPDAP CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA