Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is fliH [C]

Identifier: 77457765

GI number: 77457765

Start: 1727193

End: 1727999

Strand: Direct

Name: fliH [C]

Synonym: Pfl01_1538

Alternate gene names: 77457765

Gene position: 1727193-1727999 (Clockwise)

Preceding gene: 77457764

Following gene: 77457766

Centisome position: 26.83

GC content: 62.95

Gene sequence:

>807_bases
ATGGACAAGCATGACGACGATGTGACGGACCTGATCCGTGCCCGGGACGTCCGCGGTTTCGAATCTTGGGCGTTGCCCAG
CTTCGACCCGCCGAAACCTGAGCCCGAGCCGGAACCGGAGCCTGAACCGCCGGAAATGGAAGAGGTGCCGCTGGAGGAAG
TCCAGCCACTGACGCTGGAAGAGCTCGAAAGCATCCGTCAGGAGGCCTACAACGAGGGCTTCGCCATCGGTGAAAAGGAA
GGCTTTCACAGCGCCACCCTCAAGGTGCGCCAGGAAGCCGAAGTGGTCCTGACGGCCAAGGTCGAGAGCCTTGAGCAATT
GATGGCGCACCTGTTCGAGCCCATCGCCGAGCAAGACACCCAGATCGAAAAGTCGCTGGTCGACCTCGTGCAGCACATCG
CCAAACAGGTGATTCAGCGCGAACTGGCCATCGACTCGACGCAGATCGAACACGTCATGCGCGACGCGCTGAAGCTGTTG
CCGCTGGGCGTGGGCAATGTGCGGCTGTACGTCAATCCGCAGGATTTCGAACAGGTCAAAGCCCTGCGCGAACGTCATGA
GGAAACCTGGCGCATCGTCGAGGACGAATCCCTGCTGCCGGGCGGTTGCCGGGTCGAGACCGACCACAGCCGGATCGATG
CCAGCATCGAAACCCGCGTCAGCCAGGTCATGGCCAAGCTGTTCGACCAGTTGCACGAACAGGCCCTGCACCCGGCCGAG
CCGGACCTGAGCCTGGACCTGCCGGAAACACCCAAACCGGCACCGGTCGCAGAAGAGCCGCTCGCGGACGCCCCCGATGC
GCCTTGA

Upstream 100 bases:

>100_bases
GAGACCGCACAGAAGGAAATCCTCACCATCGCCCGCCGTATGGCCGAAGCCGGAGAAATCGTGCTCGGTGGCAAGGGCGG
CGAGGAAATGATCTAAGCCC

Downstream 100 bases:

>100_bases
ACGCACCAGCTTCGCCAAGCGCCTGAGCACTTACGCCGAGGCCACCGAAATCGCCGGTGCGCCGATCCTCGAAGGGCGCC
TTTTGCGCATGGTCGGCTTG

Product: flagellar assembly protein H

Products: NA

Alternate protein names: Flagellar Assembly Protein FliH; Flagellar Assembly Protein; Polar Flagellar Assembly Protein FliH

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLEELESIRQEAYNEGFAIGEKE
GFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDTQIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLL
PLGVGNVRLYVNPQDFEQVKALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE
PDLSLDLPETPKPAPVAEEPLADAPDAP

Sequences:

>Translated_268_residues
MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLEELESIRQEAYNEGFAIGEKE
GFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDTQIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLL
PLGVGNVRLYVNPQDFEQVKALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE
PDLSLDLPETPKPAPVAEEPLADAPDAP
>Mature_268_residues
MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLEELESIRQEAYNEGFAIGEKE
GFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDTQIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLL
PLGVGNVRLYVNPQDFEQVKALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE
PDLSLDLPETPKPAPVAEEPLADAPDAP

Specific function: Needed For Flagellar Regrowth And Assembly. [C]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082004, Length=216, Percent_Identity=26.8518518518519, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30293; Mature: 30293

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLE
CCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHH
ELESIRQEAYNEGFAIGEKEGFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLLPLGVGNVRLYVNPQDFEQVK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
ALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE
HHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDLSLDLPETPKPAPVAEEPLADAPDAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKHDDDVTDLIRARDVRGFESWALPSFDPPKPEPEPEPEPEPPEMEEVPLEEVQPLTLE
CCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHH
ELESIRQEAYNEGFAIGEKEGFHSATLKVRQEAEVVLTAKVESLEQLMAHLFEPIAEQDT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIEKSLVDLVQHIAKQVIQRELAIDSTQIEHVMRDALKLLPLGVGNVRLYVNPQDFEQVK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
ALRERHEETWRIVEDESLLPGGCRVETDHSRIDASIETRVSQVMAKLFDQLHEQALHPAE
HHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDLSLDLPETPKPAPVAEEPLADAPDAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA