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The map label for this gene is yfbE [C]

Identifier: 77457746

GI number: 77457746

Start: 1707803

End: 1708960

Strand: Direct

Name: yfbE [C]

Synonym: Pfl01_1519

Alternate gene names: 77457746

Gene position: 1707803-1708960 (Clockwise)

Preceding gene: 77457745

Following gene: 77457747

Centisome position: 26.53

GC content: 62.78

Gene sequence:

>1158_bases
ATGATTCCCTACGGCCGGCAAAGCCTCGACCAGACGGACATCGACGCGGTGGTCGAGGTGTTGCAGTCCGACTGGTTGAC
CCAGGGTCCGACCATCGAACGCTTCGAGCAGGCGATGGCCGAGCGTTGTCAGGCCGATTTCGCCGTGGCAGTGTGCAACG
CCACGGCGGCGCTGCACATTGCCTGTCTCGCGGCGGGGCTGGGAACGGGCGACCGCTTGTGGACCACGCCGAACACCTTT
CTCGCGTCGGCCAACTGCGGCCGTTATTGCGGTGCCGACGTTGATTTCGTGGACATCGATCCGCTGACCTGGAACCTCGA
TGCCGAAGTTCTGGCAAGCAAACTCGATGCTGCCGAACGCGATGGTACGCTGCCCAAAGTGCTGGTGGCAGTGGCGTTCT
CCGGGCAGAGCTGCGACATGCGGCGGATTGCCGAACTGGCCGAGCGCTATAACTTCACGGTCATCGAAGACGCCTCCCAC
GCGGTCGGCGCCAGTTACGCCGGGCGCCCGGTGGGTTGCGGTGAATTTGCCGCGATGACCGTGTTCAGCTTTCATCCGGT
GAAGATCATCACCAGCGCTGAAGGCGGCATGGTGCTGACCAATCGCCCGGAACTGGCCGAGCGCCTGCAACGCCTGCGCA
GCCACGGCATGACCCGCGATCCGCAGCAGATGACCGAACCCAGCCACGGCCCGTGGTACTACCAGCAGGTCGAACTGGGT
TTCAATTACCGGATCACCGATCTGCAAGCCGCGCTGGGCCTGTCACAGTTGGGCAAACTGGACGAGTTCATCGCCCGTCG
CCGGGAGCTGGCCGCGCGTTACGACCGCTTGCTGGCGTACTTGCCGGTGACTGTGCCGAGCCTCCAGCCGGACGCCGAAT
CGGCCTGGCATCTTTATGTGGTGCGTTTGCAGACCGAACGCATCAGCCTCAGCCACCGTCAGGTGTTCGAAGGCTTGCGC
GCCGCCGGCGTCGGCGTGAACCTGCACTACATTCCGGTGCATTTGCAGCCGTACTATCGTGACCTGGGTTTCTCCGAGGG
TGACTTCCCCGAAGCGGAGCGTTATTACGCCGAAGCGATCAGCCTGCCGCTGTTTCCGTTGCTGAGCGATCAGCAGCAGG
ATTATGTGGTTGAGCAATTGCGTCGGTTGACTGAATGA

Upstream 100 bases:

>100_bases
GTGGCGTGCCGGTCGGTGAAGATTTCGAGTACCGCTCCGACACCAACCCGCACTTCCTCTCGGTGGGGCAGATCGCCGAC
CTGCACGCGAAGCTGTCGGT

Downstream 100 bases:

>100_bases
TTGCCGCCACGGCGGTGGATGGAAAACGGTAATGCGTGATCTCAGCGAGCAGGAACAATTCTGGCAGGGCGAATTCGGCA
ACCAGTACGTTGACCGCAAC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MIPYGRQSLDQTDIDAVVEVLQSDWLTQGPTIERFEQAMAERCQADFAVAVCNATAALHIACLAAGLGTGDRLWTTPNTF
LASANCGRYCGADVDFVDIDPLTWNLDAEVLASKLDAAERDGTLPKVLVAVAFSGQSCDMRRIAELAERYNFTVIEDASH
AVGASYAGRPVGCGEFAAMTVFSFHPVKIITSAEGGMVLTNRPELAERLQRLRSHGMTRDPQQMTEPSHGPWYYQQVELG
FNYRITDLQAALGLSQLGKLDEFIARRRELAARYDRLLAYLPVTVPSLQPDAESAWHLYVVRLQTERISLSHRQVFEGLR
AAGVGVNLHYIPVHLQPYYRDLGFSEGDFPEAERYYAEAISLPLFPLLSDQQQDYVVEQLRRLTE

Sequences:

>Translated_385_residues
MIPYGRQSLDQTDIDAVVEVLQSDWLTQGPTIERFEQAMAERCQADFAVAVCNATAALHIACLAAGLGTGDRLWTTPNTF
LASANCGRYCGADVDFVDIDPLTWNLDAEVLASKLDAAERDGTLPKVLVAVAFSGQSCDMRRIAELAERYNFTVIEDASH
AVGASYAGRPVGCGEFAAMTVFSFHPVKIITSAEGGMVLTNRPELAERLQRLRSHGMTRDPQQMTEPSHGPWYYQQVELG
FNYRITDLQAALGLSQLGKLDEFIARRRELAARYDRLLAYLPVTVPSLQPDAESAWHLYVVRLQTERISLSHRQVFEGLR
AAGVGVNLHYIPVHLQPYYRDLGFSEGDFPEAERYYAEAISLPLFPLLSDQQQDYVVEQLRRLTE
>Mature_385_residues
MIPYGRQSLDQTDIDAVVEVLQSDWLTQGPTIERFEQAMAERCQADFAVAVCNATAALHIACLAAGLGTGDRLWTTPNTF
LASANCGRYCGADVDFVDIDPLTWNLDAEVLASKLDAAERDGTLPKVLVAVAFSGQSCDMRRIAELAERYNFTVIEDASH
AVGASYAGRPVGCGEFAAMTVFSFHPVKIITSAEGGMVLTNRPELAERLQRLRSHGMTRDPQQMTEPSHGPWYYQQVELG
FNYRITDLQAALGLSQLGKLDEFIARRRELAARYDRLLAYLPVTVPSLQPDAESAWHLYVVRLQTERISLSHRQVFEGLR
AAGVGVNLHYIPVHLQPYYRDLGFSEGDFPEAERYYAEAISLPLFPLLSDQQQDYVVEQLRRLTE

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=388, Percent_Identity=34.7938144329897, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI2367285, Length=390, Percent_Identity=29.4871794871795, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42924; Mature: 42924

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPYGRQSLDQTDIDAVVEVLQSDWLTQGPTIERFEQAMAERCQADFAVAVCNATAALHI
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHH
ACLAAGLGTGDRLWTTPNTFLASANCGRYCGADVDFVDIDPLTWNLDAEVLASKLDAAER
HHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHC
DGTLPKVLVAVAFSGQSCDMRRIAELAERYNFTVIEDASHAVGASYAGRPVGCGEFAAMT
CCCHHHHHHHEEECCCCCCHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCHHHHHH
VFSFHPVKIITSAEGGMVLTNRPELAERLQRLRSHGMTRDPQQMTEPSHGPWYYQQVELG
HHCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEEC
FNYRITDLQAALGLSQLGKLDEFIARRRELAARYDRLLAYLPVTVPSLQPDAESAWHLYV
CCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
VRLQTERISLSHRQVFEGLRAAGVGVNLHYIPVHLQPYYRDLGFSEGDFPEAERYYAEAI
EEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHCCCCCCCCCHHHHHHHHHH
SLPLFPLLSDQQQDYVVEQLRRLTE
CCCCCHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPYGRQSLDQTDIDAVVEVLQSDWLTQGPTIERFEQAMAERCQADFAVAVCNATAALHI
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHH
ACLAAGLGTGDRLWTTPNTFLASANCGRYCGADVDFVDIDPLTWNLDAEVLASKLDAAER
HHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHC
DGTLPKVLVAVAFSGQSCDMRRIAELAERYNFTVIEDASHAVGASYAGRPVGCGEFAAMT
CCCHHHHHHHEEECCCCCCHHHHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCHHHHHH
VFSFHPVKIITSAEGGMVLTNRPELAERLQRLRSHGMTRDPQQMTEPSHGPWYYQQVELG
HHCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEEC
FNYRITDLQAALGLSQLGKLDEFIARRRELAARYDRLLAYLPVTVPSLQPDAESAWHLYV
CCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
VRLQTERISLSHRQVFEGLRAAGVGVNLHYIPVHLQPYYRDLGFSEGDFPEAERYYAEAI
EEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECHHHHHCCCCCCCCCHHHHHHHHHH
SLPLFPLLSDQQQDYVVEQLRRLTE
CCCCCHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]