| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ispZ [H]
Identifier: 77457713
GI number: 77457713
Start: 1665442
End: 1666038
Strand: Reverse
Name: ispZ [H]
Synonym: Pfl01_1486
Alternate gene names: 77457713
Gene position: 1666038-1665442 (Counterclockwise)
Preceding gene: 77457722
Following gene: 77457712
Centisome position: 25.88
GC content: 58.63
Gene sequence:
>597_bases GTGAAACAATTCATCGATTTCATCCCGCTTCTGCTGTTCTTCATCGTCTACAAACTCGATCCACGCACCGTCGACGTTGC CGGCCATGAACTGACGGTAGGCGGCATTTACAGTGCCACCGCCATGCTGATCATCAGCTCCCTGGTGGTGTACGGCGCGC TCTTCATCAAGCAGCGCAAGCTGGAGAAGAGCCAGTGGCTGACCCTGATTGCCTGCCTGGTGTTCGGCAGCCTGACACTG GCCTTTCACAGCGAAACCTTCCTGAAATGGAAAGCCCCGGTGGTCAACTGGCTGTTCGCCCTGGCCTTCATCGGCAGCCA TTTCATCGGTGACCGCCTGCTGATCAAGCGCATCATGGGCCACGCACTGACCCTGCCGGATCCGGTCTGGACCCGACTGA ACATCGCCTGGATCGCCTTTTTCCTGTTCTGCGGGGCCGCCAACCTGTTCGTCGCCTTCACCTTCCAGAGCATCTGGGTG GACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGCTGTTCCTGGTCGGTCAGGGCATTTACCTGTCCCGTCACCTGCA CGACGCCGATACCACAACGCCAAAAACCGAGGACTGA
Upstream 100 bases:
>100_bases AATCGACATTCACGGGGATGTGTAACCTCAAATCAGCTGGCGCTATCGCGCGCCCATATGTTTGTTATTATGCCGCCACA TCCAGCTTCTGGCTCTCACT
Downstream 100 bases:
>100_bases CATGCTCTACGCCATCATTGCCACCGACGTCGCCAACTCCCTGGAAGCCCGCCTCGCTGCGCGCCCGGCACACCTTGAAC GCCTGCAAGTGCTCAAGGGC
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKQFIDFIPLLLFFIVYKLDPRTVDVAGHELTVGGIYSATAMLIISSLVVYGALFIKQRKLEKSQWLTLIACLVFGSLTL AFHSETFLKWKAPVVNWLFALAFIGSHFIGDRLLIKRIMGHALTLPDPVWTRLNIAWIAFFLFCGAANLFVAFTFQSIWV DFKVFGSLGMTVLFLVGQGIYLSRHLHDADTTTPKTED
Sequences:
>Translated_198_residues MKQFIDFIPLLLFFIVYKLDPRTVDVAGHELTVGGIYSATAMLIISSLVVYGALFIKQRKLEKSQWLTLIACLVFGSLTL AFHSETFLKWKAPVVNWLFALAFIGSHFIGDRLLIKRIMGHALTLPDPVWTRLNIAWIAFFLFCGAANLFVAFTFQSIWV DFKVFGSLGMTVLFLVGQGIYLSRHLHDADTTTPKTED >Mature_198_residues MKQFIDFIPLLLFFIVYKLDPRTVDVAGHELTVGGIYSATAMLIISSLVVYGALFIKQRKLEKSQWLTLIACLVFGSLTL AFHSETFLKWKAPVVNWLFALAFIGSHFIGDRLLIKRIMGHALTLPDPVWTRLNIAWIAFFLFCGAANLFVAFTFQSIWV DFKVFGSLGMTVLFLVGQGIYLSRHLHDADTTTPKTED
Specific function: Involved in cell division; probably involved in intracellular septation [H]
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family [H]
Homologues:
Organism=Escherichia coli, GI1787507, Length=193, Percent_Identity=43.0051813471503, Blast_Score=162, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013833 - InterPro: IPR006008 [H]
Pfam domain/function: PF04279 IspA [H]
EC number: NA
Molecular weight: Translated: 22367; Mature: 22367
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFIDFIPLLLFFIVYKLDPRTVDVAGHELTVGGIYSATAMLIISSLVVYGALFIKQRK CHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH LEKSQWLTLIACLVFGSLTLAFHSETFLKWKAPVVNWLFALAFIGSHFIGDRLLIKRIMG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALTLPDPVWTRLNIAWIAFFLFCGAANLFVAFTFQSIWVDFKVFGSLGMTVLFLVGQGI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH YLSRHLHDADTTTPKTED HEEHHCCCCCCCCCCCCC >Mature Secondary Structure MKQFIDFIPLLLFFIVYKLDPRTVDVAGHELTVGGIYSATAMLIISSLVVYGALFIKQRK CHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH LEKSQWLTLIACLVFGSLTLAFHSETFLKWKAPVVNWLFALAFIGSHFIGDRLLIKRIMG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALTLPDPVWTRLNIAWIAFFLFCGAANLFVAFTFQSIWVDFKVFGSLGMTVLFLVGQGI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH YLSRHLHDADTTTPKTED HEEHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA