Click here to switch to the map view.

The map label for this gene is bepC [H]

Identifier: 77457689

GI number: 77457689

Start: 1634796

End: 1636154

Strand: Reverse

Name: bepC [H]

Synonym: Pfl01_1462

Alternate gene names: 77457689

Gene position: 1636154-1634796 (Counterclockwise)

Preceding gene: 77457691

Following gene: 77457688

Centisome position: 25.41

GC content: 62.33

Gene sequence:

>1359_bases
ATGCGCGTACTAACCCCCCTCTGCAGCGCGGTTTTGCTGGCCATGGCTTGCACTTCCCAAGCCCAGGCCATGAACCTCAC
CGAAGCGATTCAGAGCACCATCGCTACCCACCCCGAACTGGCCTCGCGCGTGGATGCGCGCCTGTCAGCTGATGAACAGG
TGAAGGTCGCCAAGGGCGGCTTCTATCCGTCGGTGGATCTGAACGCTGCCTACGGGCGCGGCTATAGCGACAACACCAAC
ACCCGGGCTTTCGGTAACCACCACACCGAAATCCTCAATTACACCCAGTCCGAGCTGCGTCTGCGGCAGATGCTGTTCGA
CGGTTTCAACACTGCAAACGAAGTCGAGCGCACCAAGGGCGTTTCCAACTCGCGCGCCTATTACGCCCAGGGCACCGCCC
AGGACCTGGCGCTGCGCACCATCGAGGTCTACCTCGAAGTGCTCAAGCGCCGTGAACTGGTGACTCTGGCCAGGAACAAC
CTGCAGGCGCACTTGCGGGTCAACGACCAGATCGGCCTGCGCACCGAGCGCGGCGTGGGCAGCACCGCCGACTCCGATCA
ATCGGTCGCCCGTAAGGCGCTGGCGCAGAACAACCTCGACACTGCCGAAGTCGATCTGGCCGACGCCGAGTCGAACTTCT
ACAGCGTGGTCGGACGCATGCCCGATGAGCTGGAAACCCCCGCCTCGACCCGCGGCGAGTTGCCCGCCACCTTGCCCGAA
GCCCAGCAGAGCATGGTCGAGAACAACCCGTACCTGAAATCCGCCCAGGCTGACGTGCAGTCGGCCGAGAGCCAGTATGA
AGTTGCCAAGTCGCCGTTCTATCCACGCTTCGACGCAGAAGCCGCCGTCGGCGCCAACAACAACGTGCAGGGTGACGAGG
GCCACGACAACGAATGGCGGGTCGGCGTGGTGATGAACTACAACCTGTTCCGTGGCGGCAGCGACAAGGCGCGACTGGCT
TCCGACGCGCACCAGATCAACCAGGCGATGGACATCCGCAACAACGCCCTGCGCCAGCTCAACGAGAACATTCACCTGGC
GTGGAACGCCATGCTCAACGCCAAGAAACAGACCCCGACCGCCCGCGAATACGCCGAGACCACCAAGCGTGTGCGCGCCG
CGTATCAGGATCAGTTCGGCCTCGGCCAGCGCACCCTGCTCGACCTGCTCGACAGCGAAAACGAGCTGTACAACGCCAAC
CGTCGCTACACCGAAATCCGCTACACCGAGGAATATTCGATGTACCGCGTGCTGGCGAACATGGGCCAGTTGTTGAACAA
GCAGCGGGTTGTGTTACCAGCCGATGCGATTGCCGCGACCGAGGTGAAGAACGAAGCACGCTTGCCTGAACTGAAGTAG

Upstream 100 bases:

>100_bases
TCTTAGCTCTGTTGTTACAGGCATGAAACGCTTTTTACTAAAAATATCGTCAATAAATTGGCGACAGCGGAACACCATCA
GGACTCAGGGAGATGCACCC

Downstream 100 bases:

>100_bases
TCCCGATGATGTAGTGCCAGGGGAGCGATCAATATGACCAGCATGCAACCCGGTAACACCGGGATCGATCCGCGGCTGAG
TTTCGATGACCCGTTGCTCG

Product: Type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MRVLTPLCSAVLLAMACTSQAQAMNLTEAIQSTIATHPELASRVDARLSADEQVKVAKGGFYPSVDLNAAYGRGYSDNTN
TRAFGNHHTEILNYTQSELRLRQMLFDGFNTANEVERTKGVSNSRAYYAQGTAQDLALRTIEVYLEVLKRRELVTLARNN
LQAHLRVNDQIGLRTERGVGSTADSDQSVARKALAQNNLDTAEVDLADAESNFYSVVGRMPDELETPASTRGELPATLPE
AQQSMVENNPYLKSAQADVQSAESQYEVAKSPFYPRFDAEAAVGANNNVQGDEGHDNEWRVGVVMNYNLFRGGSDKARLA
SDAHQINQAMDIRNNALRQLNENIHLAWNAMLNAKKQTPTAREYAETTKRVRAAYQDQFGLGQRTLLDLLDSENELYNAN
RRYTEIRYTEEYSMYRVLANMGQLLNKQRVVLPADAIAATEVKNEARLPELK

Sequences:

>Translated_452_residues
MRVLTPLCSAVLLAMACTSQAQAMNLTEAIQSTIATHPELASRVDARLSADEQVKVAKGGFYPSVDLNAAYGRGYSDNTN
TRAFGNHHTEILNYTQSELRLRQMLFDGFNTANEVERTKGVSNSRAYYAQGTAQDLALRTIEVYLEVLKRRELVTLARNN
LQAHLRVNDQIGLRTERGVGSTADSDQSVARKALAQNNLDTAEVDLADAESNFYSVVGRMPDELETPASTRGELPATLPE
AQQSMVENNPYLKSAQADVQSAESQYEVAKSPFYPRFDAEAAVGANNNVQGDEGHDNEWRVGVVMNYNLFRGGSDKARLA
SDAHQINQAMDIRNNALRQLNENIHLAWNAMLNAKKQTPTAREYAETTKRVRAAYQDQFGLGQRTLLDLLDSENELYNAN
RRYTEIRYTEEYSMYRVLANMGQLLNKQRVVLPADAIAATEVKNEARLPELK
>Mature_452_residues
MRVLTPLCSAVLLAMACTSQAQAMNLTEAIQSTIATHPELASRVDARLSADEQVKVAKGGFYPSVDLNAAYGRGYSDNTN
TRAFGNHHTEILNYTQSELRLRQMLFDGFNTANEVERTKGVSNSRAYYAQGTAQDLALRTIEVYLEVLKRRELVTLARNN
LQAHLRVNDQIGLRTERGVGSTADSDQSVARKALAQNNLDTAEVDLADAESNFYSVVGRMPDELETPASTRGELPATLPE
AQQSMVENNPYLKSAQADVQSAESQYEVAKSPFYPRFDAEAAVGANNNVQGDEGHDNEWRVGVVMNYNLFRGGSDKARLA
SDAHQINQAMDIRNNALRQLNENIHLAWNAMLNAKKQTPTAREYAETTKRVRAAYQDQFGLGQRTLLDLLDSENELYNAN
RRYTEIRYTEEYSMYRVLANMGQLLNKQRVVLPADAIAATEVKNEARLPELK

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=428, Percent_Identity=22.8971962616822, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50365; Mature: 50365

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLTPLCSAVLLAMACTSQAQAMNLTEAIQSTIATHPELASRVDARLSADEQVKVAKGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCC
FYPSVDLNAAYGRGYSDNTNTRAFGNHHTEILNYTQSELRLRQMLFDGFNTANEVERTKG
CCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
VSNSRAYYAQGTAQDLALRTIEVYLEVLKRRELVTLARNNLQAHLRVNDQIGLRTERGVG
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCC
STADSDQSVARKALAQNNLDTAEVDLADAESNFYSVVGRMPDELETPASTRGELPATLPE
CCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCHH
AQQSMVENNPYLKSAQADVQSAESQYEVAKSPFYPRFDAEAAVGANNNVQGDEGHDNEWR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VGVVMNYNLFRGGSDKARLASDAHQINQAMDIRNNALRQLNENIHLAWNAMLNAKKQTPT
EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCC
AREYAETTKRVRAAYQDQFGLGQRTLLDLLDSENELYNANRRYTEIRYTEEYSMYRVLAN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCEEEEEECHHHHHHHHHHH
MGQLLNKQRVVLPADAIAATEVKNEARLPELK
HHHHHCCCCEEECCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRVLTPLCSAVLLAMACTSQAQAMNLTEAIQSTIATHPELASRVDARLSADEQVKVAKGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCC
FYPSVDLNAAYGRGYSDNTNTRAFGNHHTEILNYTQSELRLRQMLFDGFNTANEVERTKG
CCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
VSNSRAYYAQGTAQDLALRTIEVYLEVLKRRELVTLARNNLQAHLRVNDQIGLRTERGVG
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCC
STADSDQSVARKALAQNNLDTAEVDLADAESNFYSVVGRMPDELETPASTRGELPATLPE
CCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCHH
AQQSMVENNPYLKSAQADVQSAESQYEVAKSPFYPRFDAEAAVGANNNVQGDEGHDNEWR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VGVVMNYNLFRGGSDKARLASDAHQINQAMDIRNNALRQLNENIHLAWNAMLNAKKQTPT
EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCC
AREYAETTKRVRAAYQDQFGLGQRTLLDLLDSENELYNANRRYTEIRYTEEYSMYRVLAN
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCEEEEEECHHHHHHHHHHH
MGQLLNKQRVVLPADAIAATEVKNEARLPELK
HHHHHCCCCEEECCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]