| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457668
Identifier: 77457668
GI number: 77457668
Start: 1615306
End: 1616040
Strand: Reverse
Name: 77457668
Synonym: Pfl01_1441
Alternate gene names: NA
Gene position: 1616040-1615306 (Counterclockwise)
Preceding gene: 77457670
Following gene: 77457667
Centisome position: 25.1
GC content: 60.0
Gene sequence:
>735_bases ATGAACGTTGAGAATCATCCAGTGGTGTCGCGAGAAGAATGGCTCACCGCCCGCAGGCAGCATCTGGCCGATGAAAAAGC CTTCACCAGGGAACGCGACCGCCTCAGCGCCAAACGCCGCGCCCTGCCCTGGGTGAAGGTGGACAAGGATTACCGCTTCA TGGGGCCGAATGGCGAATTGAAACTTGCCGACCTGTTCGGCAAACACAGCCAACTCGTCGTTTACCACTTCATGTTCGCC AAGGGCTGGGAGGAAGGCTGCCCGGGCTGTTCATTCCTCAGCGACCACATCGACGGCGCCAACCAACACCTGGCCCATCA CGGCATTGCGCTGGTGGCGGTGTCCCACGCACCGTTCGCCGAATTCCAGGCCTTCAAGCGGCGGATGGGCTGGAGATTCG ACTGGGTGTCGTCGGCCGGTTGCGATTTCAACTACGACTTTGGCGTGTGCGCCCGCGCTGAAGATGTCGAGGCAGGCAAG GCTACGTACAACTACGAAAAGACCGACAGCGTCGAGGAAGAAATGCCGGGGCTGAGCGTGTTTTATCGCGCCGACAACGG CGACATTTTCCACACCTACTCAACCTACGCGCGAGGCCTGGACATGCTGGTCGGCGCCTACAATTACCTCGACCTCACGC CCAAGGGCCGGAACGAGGACGAGATCATGGAATGGGTGCGGCATCATGACCGCTACGACGGCGCCGCAAAATCCAGTTGC TGCCATGGAGACTGA
Upstream 100 bases:
>100_bases GATTATTCGGCGCCCCGACCGACCGGCGGTCTGTCGATTTTCCGGGGGGTTGAGCGACTAGTCTGAGACAGACGGTTTCA ACCCCGCAGGAGAAATCATC
Downstream 100 bases:
>100_bases GCCCCAAACACACTGAACTTTTCACCGGCCACAGCCCTCAACCGGTTAACCCGCCTTAACCGGAACTGAGGCCTGCCCCC CATGAAAAACCTGCTCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MNVENHPVVSREEWLTARRQHLADEKAFTRERDRLSAKRRALPWVKVDKDYRFMGPNGELKLADLFGKHSQLVVYHFMFA KGWEEGCPGCSFLSDHIDGANQHLAHHGIALVAVSHAPFAEFQAFKRRMGWRFDWVSSAGCDFNYDFGVCARAEDVEAGK ATYNYEKTDSVEEEMPGLSVFYRADNGDIFHTYSTYARGLDMLVGAYNYLDLTPKGRNEDEIMEWVRHHDRYDGAAKSSC CHGD
Sequences:
>Translated_244_residues MNVENHPVVSREEWLTARRQHLADEKAFTRERDRLSAKRRALPWVKVDKDYRFMGPNGELKLADLFGKHSQLVVYHFMFA KGWEEGCPGCSFLSDHIDGANQHLAHHGIALVAVSHAPFAEFQAFKRRMGWRFDWVSSAGCDFNYDFGVCARAEDVEAGK ATYNYEKTDSVEEEMPGLSVFYRADNGDIFHTYSTYARGLDMLVGAYNYLDLTPKGRNEDEIMEWVRHHDRYDGAAKSSC CHGD >Mature_244_residues MNVENHPVVSREEWLTARRQHLADEKAFTRERDRLSAKRRALPWVKVDKDYRFMGPNGELKLADLFGKHSQLVVYHFMFA KGWEEGCPGCSFLSDHIDGANQHLAHHGIALVAVSHAPFAEFQAFKRRMGWRFDWVSSAGCDFNYDFGVCARAEDVEAGK ATYNYEKTDSVEEEMPGLSVFYRADNGDIFHTYSTYARGLDMLVGAYNYLDLTPKGRNEDEIMEWVRHHDRYDGAAKSSC CHGD
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27984; Mature: 27984
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVENHPVVSREEWLTARRQHLADEKAFTRERDRLSAKRRALPWVKVDKDYRFMGPNGEL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCE KLADLFGKHSQLVVYHFMFAKGWEEGCPGCSFLSDHIDGANQHLAHHGIALVAVSHAPFA EHHHHHCCCCHHHHHHHHHHHCHHHCCCCHHHHHHHCCCHHHHHHHCCEEEEEECCCCHH EFQAFKRRMGWRFDWVSSAGCDFNYDFGVCARAEDVEAGKATYNYEKTDSVEEEMPGLSV HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEE FYRADNGDIFHTYSTYARGLDMLVGAYNYLDLTPKGRNEDEIMEWVRHHDRYDGAAKSSC EEECCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC CHGD CCCC >Mature Secondary Structure MNVENHPVVSREEWLTARRQHLADEKAFTRERDRLSAKRRALPWVKVDKDYRFMGPNGEL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCE KLADLFGKHSQLVVYHFMFAKGWEEGCPGCSFLSDHIDGANQHLAHHGIALVAVSHAPFA EHHHHHCCCCHHHHHHHHHHHCHHHCCCCHHHHHHHCCCHHHHHHHCCEEEEEECCCCHH EFQAFKRRMGWRFDWVSSAGCDFNYDFGVCARAEDVEAGKATYNYEKTDSVEEEMPGLSV HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEE FYRADNGDIFHTYSTYARGLDMLVGAYNYLDLTPKGRNEDEIMEWVRHHDRYDGAAKSSC EEECCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC CHGD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA