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The map label for this gene is 77457622

Identifier: 77457622

GI number: 77457622

Start: 1567581

End: 1568117

Strand: Reverse

Name: 77457622

Synonym: Pfl01_1395

Alternate gene names: NA

Gene position: 1568117-1567581 (Counterclockwise)

Preceding gene: 77457623

Following gene: 77457621

Centisome position: 24.36

GC content: 61.45

Gene sequence:

>537_bases
ATGATCGGTTCCACCCTCCCCCAATCCCCGTATAATCGCCCTCTTTTTCCCGAAGGCACCCCGCTCGTGGCAGACAAACG
GTACAGCTGCATTGGTTTGTATAACCCCAAATCACCGGAAAACGTCGGTTCGGTGATGCGCGCCGCAGGCTGCTACGGCG
TGTCGACCGTGTTCTATACCGGCAAGCGCTATGAACGCGCCGCCGACTTCGTCACCGACACCAAGCGCGTGCACTACGAC
ATCCCGCTGATCGGCATCGACGACCTGAAAAAGATCCTGCCGCTCAATTGCGTCCCGGTCGCCGTGGAACTGGTCGATGG
CGCCCGCCCGCTGCCGGAATACACCCACCCGGATCGCGCCCTGTACATCTTCGGCCCCGAAGACGGCTCGCTGGATCAGG
AGATCCGCGACTGGTGCGAAGACGTCGTGTACATCCCGACCACCGGCTGCATGAACCTCGCCGCCACGGTCAACGTTGTG
CTCTACGACCGCATGGCCAAAGGCCTGAATACCCGCTCCGGACCGAAATTCCGCTGA

Upstream 100 bases:

>100_bases
CGAAAATCGCCAAGGCCACGCACAATCCGTTTGCGGCGCTGGCCGGCCTCATGAAAAAAGAAGACTGAGTCGTCCGTGAT
CATTCCCGCCCCGTGCGGGA

Downstream 100 bases:

>100_bases
AACGCCGCACATCCGATGGAACGAGCTGACCGCCTGCGCAGTCAGCTTGTTTATCCATTACTCATTGCCTGGAGAAAGAT
CATGACCGAGCTCAAACGCG

Product: tRNA/rRNA methyltransferase SpoU

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; RNA Methyltransferase TrmH Family; Cold-Shock RNA Methyltransferase; rRNA Methylase; TrmH Family RNA Methyltransferase; TRNA/RRNA MethyltransferaU; rRNA Methyltransferase; SpoU RRNA Methylase Family Protein; rRNA Methylase-Family Protein; SpoU Class RRNA Methylase

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIGSTLPQSPYNRPLFPEGTPLVADKRYSCIGLYNPKSPENVGSVMRAAGCYGVSTVFYTGKRYERAADFVTDTKRVHYD
IPLIGIDDLKKILPLNCVPVAVELVDGARPLPEYTHPDRALYIFGPEDGSLDQEIRDWCEDVVYIPTTGCMNLAATVNVV
LYDRMAKGLNTRSGPKFR

Sequences:

>Translated_178_residues
MIGSTLPQSPYNRPLFPEGTPLVADKRYSCIGLYNPKSPENVGSVMRAAGCYGVSTVFYTGKRYERAADFVTDTKRVHYD
IPLIGIDDLKKILPLNCVPVAVELVDGARPLPEYTHPDRALYIFGPEDGSLDQEIRDWCEDVVYIPTTGCMNLAATVNVV
LYDRMAKGLNTRSGPKFR
>Mature_178_residues
MIGSTLPQSPYNRPLFPEGTPLVADKRYSCIGLYNPKSPENVGSVMRAAGCYGVSTVFYTGKRYERAADFVTDTKRVHYD
IPLIGIDDLKKILPLNCVPVAVELVDGARPLPEYTHPDRALYIFGPEDGSLDQEIRDWCEDVVYIPTTGCMNLAATVNVV
LYDRMAKGLNTRSGPKFR

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19779; Mature: 19779

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGSTLPQSPYNRPLFPEGTPLVADKRYSCIGLYNPKSPENVGSVMRAAGCYGVSTVFYT
CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEC
GKRYERAADFVTDTKRVHYDIPLIGIDDLKKILPLNCVPVAVELVDGARPLPEYTHPDRA
CCHHHHHHHHHHCCCEEEEECCEECHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCCCE
LYIFGPEDGSLDQEIRDWCEDVVYIPTTGCMNLAATVNVVLYDRMAKGLNTRSGPKFR
EEEECCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIGSTLPQSPYNRPLFPEGTPLVADKRYSCIGLYNPKSPENVGSVMRAAGCYGVSTVFYT
CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEC
GKRYERAADFVTDTKRVHYDIPLIGIDDLKKILPLNCVPVAVELVDGARPLPEYTHPDRA
CCHHHHHHHHHHCCCEEEEECCEECHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCCCCE
LYIFGPEDGSLDQEIRDWCEDVVYIPTTGCMNLAATVNVVLYDRMAKGLNTRSGPKFR
EEEECCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA