Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ycgI [H]

Identifier: 77457566

GI number: 77457566

Start: 1516145

End: 1516786

Strand: Reverse

Name: ycgI [H]

Synonym: Pfl01_1339

Alternate gene names: 77457566

Gene position: 1516786-1516145 (Counterclockwise)

Preceding gene: 77457567

Following gene: 77457565

Centisome position: 23.56

GC content: 61.68

Gene sequence:

>642_bases
ATGTCAGTTGCTATCGCCACTTCGCAGAAACAACCCGACACTGCGGTGTACCGCGCCACCATTCCCGCCGGCGAACCCTG
GCTGATGGAGGTCAAGGCCGGCCAGACCCTGCGCATTCTCGATCTGGAAGGCAACCAAGCGGTGGACACCCTGTTTTACA
GCACCGCCAATCCCCGCGAGCGCTACGACGTGCAACGCACATTGCGCCGCCAGAACAGCGTGTACCTGAGCACCGGCAGC
GTGCTGTATTCCAATCTCGGCAAACCGATGCTGACCATCATCGCCGACACCTGCGGCCGCCACGACACCCTCGGCGGCGC
CTGCGCGCAAGAGAGCAACACCGTGCGTTACGCCCTGGAAAAACGCTACATGCACAGCTGCCGCGACAACTACCTGCGCG
CCTCCGCCCACGACGGGCGCCTGAACAAAGGTGATATCGGGCCGAACATCAATTTCTTCATGAACGTACCGGTGACCGCC
GAGGGCGGCCTGACCTTCGAGGACGGCATTTCCGCCCCCGGCAAATATGTCGACCTGCGCGCCGAGATGGACGTGATCGT
GCTGATCTCCAACTGTCCGCAACTGAACAACCCGTGCAACGCCTACAACCCGACACCTGCGGAGCTACTGGTATGGAACT
GA

Upstream 100 bases:

>100_bases
ACGCCGACGCCAGCGTCGCCGAGCACTGCCGTACCTCGCGCCCGGAGAACGAGCGCGGCTTTATCAACACCGACCGTTTG
TTCGCCTGAGGATCATCGCC

Downstream 100 bases:

>100_bases
CATTCGTCCGTCTGCGCCGCTGGTTGTTTGCCCTGTGCCAGGCCCGTTCCGGCCAGTGTCTGAAATCCCCAAAACACCCC
TGAACCCTGTGGGAGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSVAIATSQKQPDTAVYRATIPAGEPWLMEVKAGQTLRILDLEGNQAVDTLFYSTANPRERYDVQRTLRRQNSVYLSTGS
VLYSNLGKPMLTIIADTCGRHDTLGGACAQESNTVRYALEKRYMHSCRDNYLRASAHDGRLNKGDIGPNINFFMNVPVTA
EGGLTFEDGISAPGKYVDLRAEMDVIVLISNCPQLNNPCNAYNPTPAELLVWN

Sequences:

>Translated_213_residues
MSVAIATSQKQPDTAVYRATIPAGEPWLMEVKAGQTLRILDLEGNQAVDTLFYSTANPRERYDVQRTLRRQNSVYLSTGS
VLYSNLGKPMLTIIADTCGRHDTLGGACAQESNTVRYALEKRYMHSCRDNYLRASAHDGRLNKGDIGPNINFFMNVPVTA
EGGLTFEDGISAPGKYVDLRAEMDVIVLISNCPQLNNPCNAYNPTPAELLVWN
>Mature_212_residues
SVAIATSQKQPDTAVYRATIPAGEPWLMEVKAGQTLRILDLEGNQAVDTLFYSTANPRERYDVQRTLRRQNSVYLSTGSV
LYSNLGKPMLTIIADTCGRHDTLGGACAQESNTVRYALEKRYMHSCRDNYLRASAHDGRLNKGDIGPNINFFMNVPVTAE
GGLTFEDGISAPGKYVDLRAEMDVIVLISNCPQLNNPCNAYNPTPAELLVWN

Specific function: Unknown

COG id: COG3665

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018959 [H]

Pfam domain/function: PF09347 DUF1989 [H]

EC number: NA

Molecular weight: Translated: 23520; Mature: 23389

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAIATSQKQPDTAVYRATIPAGEPWLMEVKAGQTLRILDLEGNQAVDTLFYSTANPRE
CEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCHH
RYDVQRTLRRQNSVYLSTGSVLYSNLGKPMLTIIADTCGRHDTLGGACAQESNTVRYALE
HHHHHHHHHHCCCEEEEECHHHHHHCCCHHEEHEEHHCCCCCCCCCCCCCCCCHHHHHHH
KRYMHSCRDNYLRASAHDGRLNKGDIGPNINFFMNVPVTAEGGLTFEDGISAPGKYVDLR
HHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEECCEEECCCEEECCCCCCCCCEEEEE
AEMDVIVLISNCPQLNNPCNAYNPTPAELLVWN
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SVAIATSQKQPDTAVYRATIPAGEPWLMEVKAGQTLRILDLEGNQAVDTLFYSTANPRE
EEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCHH
RYDVQRTLRRQNSVYLSTGSVLYSNLGKPMLTIIADTCGRHDTLGGACAQESNTVRYALE
HHHHHHHHHHCCCEEEEECHHHHHHCCCHHEEHEEHHCCCCCCCCCCCCCCCCHHHHHHH
KRYMHSCRDNYLRASAHDGRLNKGDIGPNINFFMNVPVTAEGGLTFEDGISAPGKYVDLR
HHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEEECCEEECCCEEECCCCCCCCCEEEEE
AEMDVIVLISNCPQLNNPCNAYNPTPAELLVWN
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751 [H]