Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77457463

Identifier: 77457463

GI number: 77457463

Start: 1407898

End: 1409511

Strand: Reverse

Name: 77457463

Synonym: Pfl01_1236

Alternate gene names: NA

Gene position: 1409511-1407898 (Counterclockwise)

Preceding gene: 77457464

Following gene: 77457461

Centisome position: 21.89

GC content: 63.07

Gene sequence:

>1614_bases
ATGTTACGAATCACCGAACTCAAGCTGCCGATCGACCATCCCGACGAAGACCTGCGCGCTGCCATCGTGCAACGCCTGGG
CATTGCCAGCGATGACCTGCTCGATTTCACCTTGTTCAAGCGCAGCTACGATGCGCGCAAAAAGTCCTCCGAACTGTGCT
TCATCTACACCATCGACCTCGAAGTGCGCGACGAGGCCAAAGTGCTGGGCAAGTTCGCCGACGACCGTAACGTCAACGTG
GCGCCGGATGTCAGCTACAAATTCGTCGGTCAGGCACCAAGCGACCTGAACCAGCGCCCGATCGTGGTCGGTTTCGGCCC
GTGCGGGATCTTCGCCGGCCTGCTGCTGGCACAGATGGGCTTCAAGCCGATCATCCTCGAACGCGGCACCGAAGTGCGCC
AGCGCACCAAGGACACCTGGGGCCTGTGGCGCAAAAGCGTGCTCAACCCCGAGTCCAACGTGCAGTTCGGCGAAGGCGGC
GCGGGCACGTTCTCCGACGGCAAGCTGTACAGCCAGATCAAGGACCCGAAATTCCTCGGCCGTAAAGTCCTGCACGAGTT
CGTCAAGGCCGGCGCGCCGGAAGAAATCCTCTACGTCAGCAAACCGCACATCGGTACGTTCCGTCTGACCGGCATGGTCG
AGACCATGCGCGAAGAAATCCGCGCCCTCGGCGGTGAAGTACGCTTTCAGGAACGCGTCACCGACGTGCTGATCGAGGAC
GGCCAACTGGTCGGCGTCGAACTGGCCAGCGGCGAAATCCTGCACTCCAGACACGTGATCCTGGCGCTGGGTCACAGTGC
CCGCGACACCTTCCGCATGCTCCACAGCCGTGGCGTGTTCATGGAAGCCAAGCCGTTCTCGGTGGGTTTCCGCATCGAGC
ACCCGCAATCGCTGATCGACCGTGCGCGACTGGGCAAATACGCCGGCCACCCCAAGTTGGGCGCCGCCGACTACAAACTG
GTGCACCACGCCAAGAACGGCCGCTCGGTCTACAGCTTCTGCATGTGCCCGGGCGGCACCGTGGTCGCGGCGACTTCCGA
GCCGAACCGCGTGGTCACCAACGGCATGAGCCAGTACTCGCGTAACGAGCGCAACGCCAACTCCGGCATCGTCGTCGGCA
TCACCCCGGAAGTCGATTATCCGGGCGGCCCGCTGGCCGGGATCGAGTTGCAGGAACGTCTGGAGTCCCACGCCTTCATC
CTCGGCGGCAGCGATTACAAGGCGCCGGCGCAACTGGTCGGCGACTTCATCGCCGGCACACCATCCACCGCGCTGGGCGA
AGTCGAGCCGTCGTACAAGCCGGGTGTGGCATTGGGCGATCTGGCCCTGGCCTTGCCGGACTTCGCCATTGAAGCCATTC
GGGAAGCCTTGCCGGCGTTCGAAAAGCAGATTCGCGGTTATTCGCTGCACGATGCGGTGCTGACCGGGATCGAGACGCGT
ACCTCGTCGCCGCTGCGCATCACCCGAAACGAGACGCTGCAGAGCATGAACGTCAAAGGTCTGTTCCCGGCCGGTGAAGG
CGCGGGTTATGCGGGCGGGATTCTGTCGGCGGGTGTTGACGGGATTCGGATTGCTGAAGCGGTGGCGCGTGACATCCTCG
GTCTGAAAGACTGA

Upstream 100 bases:

>100_bases
ACTGATCGTTTTACCCTCACGGGATCCGGCCGTTGCGGCTTATAATCGCCGCCTTCAAACGCCCTGGCGCAGTTGTGCGC
CCCGCGAACCGGATCCTGTC

Downstream 100 bases:

>100_bases
TCCGCACCACCTGAAACACTGTAAAAACCTGTGGGAGCAAATTCGCTCCCACAGTCGTTTTCAGCGTCAGATATTGGCAC
GCAGAACCGAGGCCGGCAGC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDLEVRDEAKVLGKFADDRNVNV
APDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMGFKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGG
AGTFSDGKLYSQIKDPKFLGRKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED
GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLIDRARLGKYAGHPKLGAADYKL
VHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYSRNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFI
LGGSDYKAPAQLVGDFIAGTPSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR
TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD

Sequences:

>Translated_537_residues
MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDLEVRDEAKVLGKFADDRNVNV
APDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMGFKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGG
AGTFSDGKLYSQIKDPKFLGRKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED
GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLIDRARLGKYAGHPKLGAADYKL
VHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYSRNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFI
LGGSDYKAPAQLVGDFIAGTPSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR
TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD
>Mature_537_residues
MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDLEVRDEAKVLGKFADDRNVNV
APDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMGFKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGG
AGTFSDGKLYSQIKDPKFLGRKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED
GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLIDRARLGKYAGHPKLGAADYKL
VHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYSRNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFI
LGGSDYKAPAQLVGDFIAGTPSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR
TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 58468; Mature: 58468

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDL
CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
EVRDEAKVLGKFADDRNVNVAPDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMG
EECCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHC
FKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPKFLG
CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHH
RKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED
HHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCC
GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLID
CCEEEEEECCCCEEECCEEEEEECCCHHHHHHHHHHCCCEEECCCCEEEEEECCHHHHHH
RARLGKYAGHPKLGAADYKLVHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYS
HHHHHHCCCCCCCCCCHHHHEEECCCCCEEEEEEECCCCEEEEECCCCCHHHHCCHHHHH
RNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFILGGSDYKAPAQLVGDFIAGT
CCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCEEEECCCCCCCHHHHHHHHHCCC
PSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD
CCCCEEEECCHHHHHCCCCEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDL
CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
EVRDEAKVLGKFADDRNVNVAPDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMG
EECCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHC
FKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPKFLG
CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHH
RKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED
HHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCC
GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLID
CCEEEEEECCCCEEECCEEEEEECCCHHHHHHHHHHCCCEEECCCCEEEEEECCHHHHHH
RARLGKYAGHPKLGAADYKLVHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYS
HHHHHHCCCCCCCCCCHHHHEEECCCCCEEEEEEECCCCEEEEECCCCCHHHHCCHHHHH
RNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFILGGSDYKAPAQLVGDFIAGT
CCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCEEEECCCCCCCHHHHHHHHHCCC
PSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD
CCCCEEEECCHHHHHCCCCEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]