| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457463
Identifier: 77457463
GI number: 77457463
Start: 1407898
End: 1409511
Strand: Reverse
Name: 77457463
Synonym: Pfl01_1236
Alternate gene names: NA
Gene position: 1409511-1407898 (Counterclockwise)
Preceding gene: 77457464
Following gene: 77457461
Centisome position: 21.89
GC content: 63.07
Gene sequence:
>1614_bases ATGTTACGAATCACCGAACTCAAGCTGCCGATCGACCATCCCGACGAAGACCTGCGCGCTGCCATCGTGCAACGCCTGGG CATTGCCAGCGATGACCTGCTCGATTTCACCTTGTTCAAGCGCAGCTACGATGCGCGCAAAAAGTCCTCCGAACTGTGCT TCATCTACACCATCGACCTCGAAGTGCGCGACGAGGCCAAAGTGCTGGGCAAGTTCGCCGACGACCGTAACGTCAACGTG GCGCCGGATGTCAGCTACAAATTCGTCGGTCAGGCACCAAGCGACCTGAACCAGCGCCCGATCGTGGTCGGTTTCGGCCC GTGCGGGATCTTCGCCGGCCTGCTGCTGGCACAGATGGGCTTCAAGCCGATCATCCTCGAACGCGGCACCGAAGTGCGCC AGCGCACCAAGGACACCTGGGGCCTGTGGCGCAAAAGCGTGCTCAACCCCGAGTCCAACGTGCAGTTCGGCGAAGGCGGC GCGGGCACGTTCTCCGACGGCAAGCTGTACAGCCAGATCAAGGACCCGAAATTCCTCGGCCGTAAAGTCCTGCACGAGTT CGTCAAGGCCGGCGCGCCGGAAGAAATCCTCTACGTCAGCAAACCGCACATCGGTACGTTCCGTCTGACCGGCATGGTCG AGACCATGCGCGAAGAAATCCGCGCCCTCGGCGGTGAAGTACGCTTTCAGGAACGCGTCACCGACGTGCTGATCGAGGAC GGCCAACTGGTCGGCGTCGAACTGGCCAGCGGCGAAATCCTGCACTCCAGACACGTGATCCTGGCGCTGGGTCACAGTGC CCGCGACACCTTCCGCATGCTCCACAGCCGTGGCGTGTTCATGGAAGCCAAGCCGTTCTCGGTGGGTTTCCGCATCGAGC ACCCGCAATCGCTGATCGACCGTGCGCGACTGGGCAAATACGCCGGCCACCCCAAGTTGGGCGCCGCCGACTACAAACTG GTGCACCACGCCAAGAACGGCCGCTCGGTCTACAGCTTCTGCATGTGCCCGGGCGGCACCGTGGTCGCGGCGACTTCCGA GCCGAACCGCGTGGTCACCAACGGCATGAGCCAGTACTCGCGTAACGAGCGCAACGCCAACTCCGGCATCGTCGTCGGCA TCACCCCGGAAGTCGATTATCCGGGCGGCCCGCTGGCCGGGATCGAGTTGCAGGAACGTCTGGAGTCCCACGCCTTCATC CTCGGCGGCAGCGATTACAAGGCGCCGGCGCAACTGGTCGGCGACTTCATCGCCGGCACACCATCCACCGCGCTGGGCGA AGTCGAGCCGTCGTACAAGCCGGGTGTGGCATTGGGCGATCTGGCCCTGGCCTTGCCGGACTTCGCCATTGAAGCCATTC GGGAAGCCTTGCCGGCGTTCGAAAAGCAGATTCGCGGTTATTCGCTGCACGATGCGGTGCTGACCGGGATCGAGACGCGT ACCTCGTCGCCGCTGCGCATCACCCGAAACGAGACGCTGCAGAGCATGAACGTCAAAGGTCTGTTCCCGGCCGGTGAAGG CGCGGGTTATGCGGGCGGGATTCTGTCGGCGGGTGTTGACGGGATTCGGATTGCTGAAGCGGTGGCGCGTGACATCCTCG GTCTGAAAGACTGA
Upstream 100 bases:
>100_bases ACTGATCGTTTTACCCTCACGGGATCCGGCCGTTGCGGCTTATAATCGCCGCCTTCAAACGCCCTGGCGCAGTTGTGCGC CCCGCGAACCGGATCCTGTC
Downstream 100 bases:
>100_bases TCCGCACCACCTGAAACACTGTAAAAACCTGTGGGAGCAAATTCGCTCCCACAGTCGTTTTCAGCGTCAGATATTGGCAC GCAGAACCGAGGCCGGCAGC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDLEVRDEAKVLGKFADDRNVNV APDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMGFKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGG AGTFSDGKLYSQIKDPKFLGRKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLIDRARLGKYAGHPKLGAADYKL VHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYSRNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFI LGGSDYKAPAQLVGDFIAGTPSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD
Sequences:
>Translated_537_residues MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDLEVRDEAKVLGKFADDRNVNV APDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMGFKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGG AGTFSDGKLYSQIKDPKFLGRKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLIDRARLGKYAGHPKLGAADYKL VHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYSRNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFI LGGSDYKAPAQLVGDFIAGTPSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD >Mature_537_residues MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDLEVRDEAKVLGKFADDRNVNV APDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMGFKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGG AGTFSDGKLYSQIKDPKFLGRKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLIDRARLGKYAGHPKLGAADYKL VHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYSRNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFI LGGSDYKAPAQLVGDFIAGTPSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 58468; Mature: 58468
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDL CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEE EVRDEAKVLGKFADDRNVNVAPDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMG EECCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHC FKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPKFLG CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHH RKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED HHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCC GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLID CCEEEEEECCCCEEECCEEEEEECCCHHHHHHHHHHCCCEEECCCCEEEEEECCHHHHHH RARLGKYAGHPKLGAADYKLVHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYS HHHHHHCCCCCCCCCCHHHHEEECCCCCEEEEEEECCCCEEEEECCCCCHHHHCCHHHHH RNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFILGGSDYKAPAQLVGDFIAGT CCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCEEEECCCCCCCHHHHHHHHHCCC PSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD CCCCEEEECCHHHHHCCCCEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRITELKLPIDHPDEDLRAAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDL CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEE EVRDEAKVLGKFADDRNVNVAPDVSYKFVGQAPSDLNQRPIVVGFGPCGIFAGLLLAQMG EECCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHHC FKPIILERGTEVRQRTKDTWGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPKFLG CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCHHHHH RKVLHEFVKAGAPEEILYVSKPHIGTFRLTGMVETMREEIRALGGEVRFQERVTDVLIED HHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCC GQLVGVELASGEILHSRHVILALGHSARDTFRMLHSRGVFMEAKPFSVGFRIEHPQSLID CCEEEEEECCCCEEECCEEEEEECCCHHHHHHHHHHCCCEEECCCCEEEEEECCHHHHHH RARLGKYAGHPKLGAADYKLVHHAKNGRSVYSFCMCPGGTVVAATSEPNRVVTNGMSQYS HHHHHHCCCCCCCCCCHHHHEEECCCCCEEEEEEECCCCEEEEECCCCCHHHHCCHHHHH RNERNANSGIVVGITPEVDYPGGPLAGIELQERLESHAFILGGSDYKAPAQLVGDFIAGT CCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCEEEECCCCCCCHHHHHHHHHCCC PSTALGEVEPSYKPGVALGDLALALPDFAIEAIREALPAFEKQIRGYSLHDAVLTGIETR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC TSSPLRITRNETLQSMNVKGLFPAGEGAGYAGGILSAGVDGIRIAEAVARDILGLKD CCCCEEEECCHHHHHCCCCEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]