| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rhlG [H]
Identifier: 77457414
GI number: 77457414
Start: 1354889
End: 1355659
Strand: Reverse
Name: rhlG [H]
Synonym: Pfl01_1187
Alternate gene names: 77457414
Gene position: 1355659-1354889 (Counterclockwise)
Preceding gene: 77457415
Following gene: 77457413
Centisome position: 21.06
GC content: 62.78
Gene sequence:
>771_bases ATGCACCCGTATTTCTCCCTGCAAGGCCGCACCGCCCTGGTGACCGGCGGCACCCGTGGTATCGGCAAAATGATCGCCAA GGCCTATGTCGAGGCCGGCGCCCGCGTGTACGTCTGCTCCCGTGACGCGGAAGCCTGTCATCAAACCGCTGAAGAACTCA GTGCTCTGGGCACTTGTCTGGGCATCGCAGCGAATCTGGCGACGGAAGAAGGCGTGAAAGAGCTGGCCGCGCGACTGGGC GAACAGATCACTCATCTGGACATTCTGGTGAACAACGCCGGCACGACGTGGGGCGCGCCGCTGGAGAGCTACCCGGTCAA GGGCTGGGAAAAGGTCATGCAACTCAACGTGACGTCGGTGTTCAGCTGCATCCAGCAGTTTCTGCCGTTGTTGCGTAAAT CCGGGTCGGCGGCCAATCCGGCGCGGATCATCAACATCGGTTCGGTGGCGGGGATTTCTTCCTTCGGCGAACAGGCCTAC GCCTACGGGCCGAGCAAGGCCGCCCTGCATCAACTGTCACGGATTCTCGCCCGGGAACTGGTGAGCCAGCACATCAACGT CAACGTCATCGCACCGGGGCGCTTCCCGAGCAAGATGACCCAGCACATCGGCAGCGACCAGCAGGCGCTGGCCGATGACA CCGCGCTGATCCCGATGAAACGCTGGGGCCGCGAGGAAGAGATGGCGGCGCTGGCGATCAGCCTGGCGAGTACCGCCGGG GCGTACATGACCGGGAATATCATTCCGCTGGATGGCGGGTTCAGTCTTTAG
Upstream 100 bases:
>100_bases CCGTTTTCATGCATGCCCTTCCATTCCTTCCAAAAATAGTGGCTCCGCTTTTTGCGGCCGGCGACTAGGGTGTACTGAAC CCTAGCCCTCAGGATTCGCC
Downstream 100 bases:
>100_bases ATCGGCGACGCGGCCGGACGGGTTATCATGCCCGCCCTGCTCCGCTTCGAATGCAAACCATGACTTACAGCGTCTCCCCC ATCGGCTTCGTCCGCTCCTG
Product: Short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MHPYFSLQGRTALVTGGTRGIGKMIAKAYVEAGARVYVCSRDAEACHQTAEELSALGTCLGIAANLATEEGVKELAARLG EQITHLDILVNNAGTTWGAPLESYPVKGWEKVMQLNVTSVFSCIQQFLPLLRKSGSAANPARIINIGSVAGISSFGEQAY AYGPSKAALHQLSRILARELVSQHINVNVIAPGRFPSKMTQHIGSDQQALADDTALIPMKRWGREEEMAALAISLASTAG AYMTGNIIPLDGGFSL
Sequences:
>Translated_256_residues MHPYFSLQGRTALVTGGTRGIGKMIAKAYVEAGARVYVCSRDAEACHQTAEELSALGTCLGIAANLATEEGVKELAARLG EQITHLDILVNNAGTTWGAPLESYPVKGWEKVMQLNVTSVFSCIQQFLPLLRKSGSAANPARIINIGSVAGISSFGEQAY AYGPSKAALHQLSRILARELVSQHINVNVIAPGRFPSKMTQHIGSDQQALADDTALIPMKRWGREEEMAALAISLASTAG AYMTGNIIPLDGGFSL >Mature_256_residues MHPYFSLQGRTALVTGGTRGIGKMIAKAYVEAGARVYVCSRDAEACHQTAEELSALGTCLGIAANLATEEGVKELAARLG EQITHLDILVNNAGTTWGAPLESYPVKGWEKVMQLNVTSVFSCIQQFLPLLRKSGSAANPARIINIGSVAGISSFGEQAY AYGPSKAALHQLSRILARELVSQHINVNVIAPGRFPSKMTQHIGSDQQALADDTALIPMKRWGREEEMAALAISLASTAG AYMTGNIIPLDGGFSL
Specific function: Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=31.6602316602317, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=29.6747967479675, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=27.4900398406374, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI66933014, Length=190, Percent_Identity=33.1578947368421, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=27.6, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=31.3953488372093, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=28.1746031746032, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI59889578, Length=239, Percent_Identity=28.8702928870293, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI31542939, Length=206, Percent_Identity=29.126213592233, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI109715829, Length=250, Percent_Identity=27.2, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI225579078, Length=270, Percent_Identity=29.2592592592593, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI33667109, Length=205, Percent_Identity=29.7560975609756, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=25.390625, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI224922801, Length=183, Percent_Identity=30.0546448087432, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI20149619, Length=203, Percent_Identity=27.0935960591133, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI166795268, Length=210, Percent_Identity=30.4761904761905, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI209862901, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI19923983, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=33.8645418326693, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1790717, Length=257, Percent_Identity=30.7392996108949, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=31.3725490196078, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=32.9365079365079, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI87082100, Length=261, Percent_Identity=31.4176245210728, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=30, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=29.296875, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=30.952380952381, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=30.0395256916996, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1786812, Length=265, Percent_Identity=27.9245283018868, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=31.6939890710383, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787526, Length=223, Percent_Identity=30.4932735426009, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=33.4661354581673, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17555706, Length=251, Percent_Identity=31.4741035856574, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=33.7254901960784, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=30.8270676691729, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=30.0751879699248, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=32.6771653543307, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17531453, Length=271, Percent_Identity=30.2583025830258, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=29.9625468164794, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=31.0606060606061, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=29.368029739777, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=31.9702602230483, Blast_Score=98, Evalue=3e-21, Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=29.7397769516729, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=30.1115241635688, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17562904, Length=271, Percent_Identity=28.7822878228782, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=27.4436090225564, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=28.6792452830189, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=26.5151515151515, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=31.1787072243346, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=25.7462686567164, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=25.4980079681275, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115534694, Length=264, Percent_Identity=28.7878787878788, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17538182, Length=260, Percent_Identity=30, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=30.5660377358491, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562990, Length=265, Percent_Identity=27.1698113207547, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=23.8095238095238, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=27.2373540856031, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17544670, Length=275, Percent_Identity=25.8181818181818, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17564282, Length=151, Percent_Identity=28.476821192053, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=24.9027237354086, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17558990, Length=210, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203115, Length=208, Percent_Identity=25.9615384615385, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193203117, Length=148, Percent_Identity=28.3783783783784, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17555612, Length=226, Percent_Identity=29.646017699115, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17561272, Length=270, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=228, Percent_Identity=27.1929824561404, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322227, Length=207, Percent_Identity=29.4685990338164, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=24.2063492063492, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=214, Percent_Identity=28.5046728971963, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=34.1269841269841, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=30.3149606299213, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=31.25, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI24643142, Length=255, Percent_Identity=30.5882352941176, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=28.3464566929134, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=27.843137254902, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI24644337, Length=255, Percent_Identity=29.8039215686275, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI21358495, Length=201, Percent_Identity=28.8557213930348, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=26.6932270916335, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24586328, Length=210, Percent_Identity=28.0952380952381, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553409, Length=212, Percent_Identity=26.8867924528302, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24647948, Length=212, Percent_Identity=26.8867924528302, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24647946, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17737361, Length=258, Percent_Identity=24.4186046511628, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI21355631, Length=154, Percent_Identity=29.8701298701299, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24656154, Length=252, Percent_Identity=26.5873015873016, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922628, Length=252, Percent_Identity=26.5873015873016, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28571387, Length=200, Percent_Identity=27.5, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581726, Length=159, Percent_Identity=27.0440251572327, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27184; Mature: 27184
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPYFSLQGRTALVTGGTRGIGKMIAKAYVEAGARVYVCSRDAEACHQTAEELSALGTCL CCCCEECCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH GIAANLATEEGVKELAARLGEQITHLDILVNNAGTTWGAPLESYPVKGWEKVMQLNVTSV HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH FSCIQQFLPLLRKSGSAANPARIINIGSVAGISSFGEQAYAYGPSKAALHQLSRILAREL HHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHH VSQHINVNVIAPGRFPSKMTQHIGSDQQALADDTALIPMKRWGREEEMAALAISLASTAG HHHCCCEEEEECCCCHHHHHHHCCCCHHHHHCCCEECCHHHCCCHHHHHHHHHHHHHHCC AYMTGNIIPLDGGFSL CEEECCEEECCCCCCC >Mature Secondary Structure MHPYFSLQGRTALVTGGTRGIGKMIAKAYVEAGARVYVCSRDAEACHQTAEELSALGTCL CCCCEECCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH GIAANLATEEGVKELAARLGEQITHLDILVNNAGTTWGAPLESYPVKGWEKVMQLNVTSV HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH FSCIQQFLPLLRKSGSAANPARIINIGSVAGISSFGEQAYAYGPSKAALHQLSRILAREL HHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHH VSQHINVNVIAPGRFPSKMTQHIGSDQQALADDTALIPMKRWGREEEMAALAISLASTAG HHHCCCEEEEECCCCHHHHHHHCCCCHHHHHCCCEECCHHHCCCHHHHHHHHHHHHHHCC AYMTGNIIPLDGGFSL CEEECCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9721281; 10984043 [H]