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The map label for this gene is yeiE [H]

Identifier: 77457411

GI number: 77457411

Start: 1352211

End: 1353137

Strand: Reverse

Name: yeiE [H]

Synonym: Pfl01_1184

Alternate gene names: 77457411

Gene position: 1353137-1352211 (Counterclockwise)

Preceding gene: 77457413

Following gene: 77457407

Centisome position: 21.02

GC content: 60.95

Gene sequence:

>927_bases
ATGCGATTTACTCTTCGTCAACTGCAAGTCTTCGTCGCCGTCGCCCAACAGGAGAGCGTGTCCCGCGCAGCGGGTCTGCT
CAACTTGTCGCAATCGGCCGCCAGCACTTCCATCACCGAACTGGAGCGCCAGTCCAGCTGCCAGCTGTTCGATCGCGCCG
GCAAACGCCTGAGCCTCAACGCCCTCGGCAAACAGTTGCTGCCGCAAGCGGTGGCCCTGCTCGATCAGGCCAAGGAAATC
GAAGACCTGCTCAACGGCAAATCCGGTTTCGGCTCGCTGTCAGTGGGCGCAACCCTGACCATCGGCAATTACCTGGCGAC
GCTGCTGATCGGCGGTTTCATGCAGCGCCACCCGGAAAGCCAGGTGAAGCTGCATGTGCAGAACACTGCCAATATCGTGC
AACAGGTTGCTCATTACGAAATTGATCTGGGTCTAATCGAAGGCGATTGCAGCCATCCGGACATCGAAGTGCAGAGTTGG
GTCGAGGATGAACTGGTGGTGTTCTGCGCCCCACAGCATCCGTTGGCCAAGCGCGGCAGCGCGACCATGGAAGAGTTGAC
GCACGAAGCGTGGATTTTGCGGGAGCAGGGTTCGGGGACGCGCCTGACCTTCGATCAGGCGATGCGGCATCACCGCAGCG
CGCTGAACATCCGGCTGGAGCTGGAACACACCGAAGCGATCAAGCGCGCCGTGGAATCAGGCCTGGGAATTGGCTGCATC
TCGCGTCTTGCGCTGCGTGACGCCTTCCGGCGCGGCAGCCTGGTACCGGTGGAGACGCCGGATCTGGATCTGGCGCGGCA
GTTCTATTTCATCTGGCACAAGCAAAAGTACCAGACCTCTGCCATGCGCGAATTCCTCGACCTGTGCCGCGCTTTCACCG
CCGGGGTGCAGCGCAGCGACGAGATCGTTCTGCCGAGCATCGCTTAA

Upstream 100 bases:

>100_bases
GTTGAAGAATGCCGACGGTGCGCAATTGCATCGCATTCTAATAGCGCCGACAATATCTGTTAACTGGATTATTAAGATAA
GGGTTATCGGTTATATCGAT

Downstream 100 bases:

>100_bases
AGCAGAATCACCGCCCACACCAGGGCGATCATGCTCAGTGCCACGAATTGCGCGGCACTGCCCATGTCCTTGGCGTTCTT
GGACAGCGGATGCAACTCCA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRFTLRQLQVFVAVAQQESVSRAAGLLNLSQSAASTSITELERQSSCQLFDRAGKRLSLNALGKQLLPQAVALLDQAKEI
EDLLNGKSGFGSLSVGATLTIGNYLATLLIGGFMQRHPESQVKLHVQNTANIVQQVAHYEIDLGLIEGDCSHPDIEVQSW
VEDELVVFCAPQHPLAKRGSATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCI
SRLALRDAFRRGSLVPVETPDLDLARQFYFIWHKQKYQTSAMREFLDLCRAFTAGVQRSDEIVLPSIA

Sequences:

>Translated_308_residues
MRFTLRQLQVFVAVAQQESVSRAAGLLNLSQSAASTSITELERQSSCQLFDRAGKRLSLNALGKQLLPQAVALLDQAKEI
EDLLNGKSGFGSLSVGATLTIGNYLATLLIGGFMQRHPESQVKLHVQNTANIVQQVAHYEIDLGLIEGDCSHPDIEVQSW
VEDELVVFCAPQHPLAKRGSATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCI
SRLALRDAFRRGSLVPVETPDLDLARQFYFIWHKQKYQTSAMREFLDLCRAFTAGVQRSDEIVLPSIA
>Mature_308_residues
MRFTLRQLQVFVAVAQQESVSRAAGLLNLSQSAASTSITELERQSSCQLFDRAGKRLSLNALGKQLLPQAVALLDQAKEI
EDLLNGKSGFGSLSVGATLTIGNYLATLLIGGFMQRHPESQVKLHVQNTANIVQQVAHYEIDLGLIEGDCSHPDIEVQSW
VEDELVVFCAPQHPLAKRGSATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCI
SRLALRDAFRRGSLVPVETPDLDLARQFYFIWHKQKYQTSAMREFLDLCRAFTAGVQRSDEIVLPSIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=289, Percent_Identity=44.2906574394464, Blast_Score=241, Evalue=3e-65,
Organism=Escherichia coli, GI145693105, Length=252, Percent_Identity=30.1587301587302, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788748, Length=294, Percent_Identity=27.891156462585, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787879, Length=292, Percent_Identity=27.7397260273973, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787601, Length=194, Percent_Identity=26.8041237113402, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI157672245, Length=297, Percent_Identity=26.9360269360269, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081904, Length=206, Percent_Identity=31.0679611650485, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787530, Length=265, Percent_Identity=27.5471698113208, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788296, Length=295, Percent_Identity=26.1016949152542, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082132, Length=293, Percent_Identity=24.9146757679181, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790399, Length=261, Percent_Identity=26.8199233716475, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788887, Length=301, Percent_Identity=25.9136212624585, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787128, Length=300, Percent_Identity=26.3333333333333, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786401, Length=302, Percent_Identity=23.5099337748344, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789204, Length=253, Percent_Identity=23.3201581027668, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1789506, Length=201, Percent_Identity=24.3781094527363, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34202; Mature: 34202

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTLRQLQVFVAVAQQESVSRAAGLLNLSQSAASTSITELERQSSCQLFDRAGKRLSLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH
ALGKQLLPQAVALLDQAKEIEDLLNGKSGFGSLSVGATLTIGNYLATLLIGGFMQRHPES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCC
QVKLHVQNTANIVQQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHPLAKRGS
CEEEEEHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCHHHCCC
ATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCI
HHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHEEEEEEEHHHHHHHHHHHCCCCHHHH
SRLALRDAFRRGSLVPVETPDLDLARQFYFIWHKQKYQTSAMREFLDLCRAFTAGVQRSD
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EIVLPSIA
CEECCCCC
>Mature Secondary Structure
MRFTLRQLQVFVAVAQQESVSRAAGLLNLSQSAASTSITELERQSSCQLFDRAGKRLSLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH
ALGKQLLPQAVALLDQAKEIEDLLNGKSGFGSLSVGATLTIGNYLATLLIGGFMQRHPES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCC
QVKLHVQNTANIVQQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHPLAKRGS
CEEEEEHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCHHHCCC
ATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCI
HHHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHEEEEEEEHHHHHHHHHHHCCCCHHHH
SRLALRDAFRRGSLVPVETPDLDLARQFYFIWHKQKYQTSAMREFLDLCRAFTAGVQRSD
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EIVLPSIA
CEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]