| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is acrR [C]
Identifier: 77457305
GI number: 77457305
Start: 1245834
End: 1246469
Strand: Reverse
Name: acrR [C]
Synonym: Pfl01_1078
Alternate gene names: 77457305
Gene position: 1246469-1245834 (Counterclockwise)
Preceding gene: 77457309
Following gene: 77457303
Centisome position: 19.36
GC content: 59.75
Gene sequence:
>636_bases ATGTCGAACAATCTTTCCACTCCAAACGGCCCCGGCCGACCGAAGGATCCGGCCAAGCGCCAGGCGATTCTCGAGGCGGC GAAAATCCTGTTTCTGAGTCATGGCTATGCCAACACCAGCATGGACGCGGTAGCCGCCGAGGCCGGGGTGTCGAAGCTGA CGGTGTACAGCCATTTCAACGACAAGGAGACGCTGTTCTCCGCCGCCGTGGTGGCTAAATGCGAGGAGCAATTACCGCCG CTGTTCTTCGAATTGCCGGACGGCATTGCGGTGGAAAATGTGTTGCTGAACATTGCGCGAGGCTTTCACCATCTCATCAA CAGTGAGGAATCGGTGAACCTGCATCGCCTGATCATGGCCTTGGGCAGTCAGGATCCGAAGCTGTCGCTGATCTTCTTCG AGGCCGGCCCCCAGCGCATGGTGCAAGGCATGGAACGATTGCTGCGGCGGATTCACGAAACCGGCGTGCTGAGCATCGAC AACCCGCACAACGCCGCCGAGCACTTCTTTTGTCTGATCAAGGGCGCCGGGAATTTCCGCCTGTTGTACGGCTGCGGTGA GCCGCTGACCGACGAGGCGGCGGAAAGTCATGTGCAGGAAGTGGTCGGGCTGTTCATGCGGGCCTATCGCCCCTGA
Upstream 100 bases:
>100_bases GAACATGGTGAAGGACCTTTCGCTAAGGAGGCTTGGAATAATTATACTGGCCGGTATGTTATTAATAGCAAACTCACCAG TCCAGTATTAAAAGCGAAGA
Downstream 100 bases:
>100_bases AAACAAAAATCCCACGCCATGCGTGGGATTTTCTTATGCGACGGCTCAGGCCTTGAGCGCTTTCTTCGGGTAGATGTCAT AGCGGCTGGATTTGCCGTCC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcription Regulator Protein; Transcriptional Regulator Protein; TetR-Family Transcriptional Regulator; Bacterial Regulatory Protein; Transcriptional Regulator Protein TetR Family; TetR-Type Transcriptional Regulator; TetR-Family Trancriptional Regulatory Protein; Bacterial Regulatory Protein TetR Family Protein; TetR Family Regulatory Protein; TetR-Like Virulence Regulator; TetR Family Transcriptional RegulatoR; Regulatory Protein Tetr; Calsymin Transcriptional Regulator; Transcriptional Regulator TetR; TetR Family Transcriptional Regulatory Protein; TetR/AcrR Family Transcriptional Regulator
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSNNLSTPNGPGRPKDPAKRQAILEAAKILFLSHGYANTSMDAVAAEAGVSKLTVYSHFNDKETLFSAAVVAKCEEQLPP LFFELPDGIAVENVLLNIARGFHHLINSEESVNLHRLIMALGSQDPKLSLIFFEAGPQRMVQGMERLLRRIHETGVLSID NPHNAAEHFFCLIKGAGNFRLLYGCGEPLTDEAAESHVQEVVGLFMRAYRP
Sequences:
>Translated_211_residues MSNNLSTPNGPGRPKDPAKRQAILEAAKILFLSHGYANTSMDAVAAEAGVSKLTVYSHFNDKETLFSAAVVAKCEEQLPP LFFELPDGIAVENVLLNIARGFHHLINSEESVNLHRLIMALGSQDPKLSLIFFEAGPQRMVQGMERLLRRIHETGVLSID NPHNAAEHFFCLIKGAGNFRLLYGCGEPLTDEAAESHVQEVVGLFMRAYRP >Mature_210_residues SNNLSTPNGPGRPKDPAKRQAILEAAKILFLSHGYANTSMDAVAAEAGVSKLTVYSHFNDKETLFSAAVVAKCEEQLPPL FFELPDGIAVENVLLNIARGFHHLINSEESVNLHRLIMALGSQDPKLSLIFFEAGPQRMVQGMERLLRRIHETGVLSIDN PHNAAEHFFCLIKGAGNFRLLYGCGEPLTDEAAESHVQEVVGLFMRAYRP
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23223; Mature: 23092
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNLSTPNGPGRPKDPAKRQAILEAAKILFLSHGYANTSMDAVAAEAGVSKLTVYSHFN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCC DKETLFSAAVVAKCEEQLPPLFFELPDGIAVENVLLNIARGFHHLINSEESVNLHRLIMA CHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LGSQDPKLSLIFFEAGPQRMVQGMERLLRRIHETGVLSIDNPHNAAEHFFCLIKGAGNFR HCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHEEEEEECCCCEE LLYGCGEPLTDEAAESHVQEVVGLFMRAYRP EEEECCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNNLSTPNGPGRPKDPAKRQAILEAAKILFLSHGYANTSMDAVAAEAGVSKLTVYSHFN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCC DKETLFSAAVVAKCEEQLPPLFFELPDGIAVENVLLNIARGFHHLINSEESVNLHRLIMA CHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LGSQDPKLSLIFFEAGPQRMVQGMERLLRRIHETGVLSIDNPHNAAEHFFCLIKGAGNFR HCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHEEEEEECCCCEE LLYGCGEPLTDEAAESHVQEVVGLFMRAYRP EEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA