| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457267
Identifier: 77457267
GI number: 77457267
Start: 1205336
End: 1205848
Strand: Reverse
Name: 77457267
Synonym: Pfl01_1040
Alternate gene names: NA
Gene position: 1205848-1205336 (Counterclockwise)
Preceding gene: 77457270
Following gene: 77457266
Centisome position: 18.73
GC content: 56.92
Gene sequence:
>513_bases ATGCCCAATCAAACTCAAAATTCCTCTAAAGATCATCCTTACTTCATCCCCACCGTATTCACCCGCCACAACCGCTTCCT CCACGCTCTCCTTCTCGATCACCAAGCCTGGTTCTGCGCTCAGGATCTCGGCCGCATGATGGGCCATCCCTTGAACCCAC GCGTCACCCTGAAACTCGACCCCGACCAACGCCGCACCGTCCGGCTGAGCAAGTACGGCAAAGTTGTCGAGACGCCAATG GTCAGCGAATCCGGCATGTTTGCGCTGCTGGTTCACCATTTCATCCCGGAAAACCGCAACCTGCGCCAATGGCTGAGTAA TGAAGTCATTCCCATCCTGCGGGAAACCAGCTCAGTAACAGCGGAGAACTGCCCGAGCCTGAGCTCGATGCATTGGGCCG GCGTCACCGTGCCGCTGTTGCACTGGCAACAACAGGCTTGGGTGAAATGGCGTGATATGCCGGAATTAGTGCTTGGTCAG CAGCCCTATCTGGTCGCGGGGACATGTAGCTGA
Upstream 100 bases:
>100_bases TGTGATATCAACAGCCCGGTGTCGAAGCCGGAACAAAATCAAAATGGCGCAACCGCACTCATCCGAGTGGCGGCTCTATT CTCAATATTGGAGTCGACAA
Downstream 100 bases:
>100_bases CGGCCTCACTTGGGCCAATGAAAAAGGGCCGGACTCCAGAGTCCGACCCTTCAATGTTTACCATCAACCTCGACCAATTT CTGACCGAGTCCCTAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPNQTQNSSKDHPYFIPTVFTRHNRFLHALLLDHQAWFCAQDLGRMMGHPLNPRVTLKLDPDQRRTVRLSKYGKVVETPM VSESGMFALLVHHFIPENRNLRQWLSNEVIPILRETSSVTAENCPSLSSMHWAGVTVPLLHWQQQAWVKWRDMPELVLGQ QPYLVAGTCS
Sequences:
>Translated_170_residues MPNQTQNSSKDHPYFIPTVFTRHNRFLHALLLDHQAWFCAQDLGRMMGHPLNPRVTLKLDPDQRRTVRLSKYGKVVETPM VSESGMFALLVHHFIPENRNLRQWLSNEVIPILRETSSVTAENCPSLSSMHWAGVTVPLLHWQQQAWVKWRDMPELVLGQ QPYLVAGTCS >Mature_169_residues PNQTQNSSKDHPYFIPTVFTRHNRFLHALLLDHQAWFCAQDLGRMMGHPLNPRVTLKLDPDQRRTVRLSKYGKVVETPMV SESGMFALLVHHFIPENRNLRQWLSNEVIPILRETSSVTAENCPSLSSMHWAGVTVPLLHWQQQAWVKWRDMPELVLGQQ PYLVAGTCS
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19636; Mature: 19505
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNQTQNSSKDHPYFIPTVFTRHNRFLHALLLDHQAWFCAQDLGRMMGHPLNPRVTLKLD CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEC PDQRRTVRLSKYGKVVETPMVSESGMFALLVHHFIPENRNLRQWLSNEVIPILRETSSVT CCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCEEHHCCCCCC AENCPSLSSMHWAGVTVPLLHWQQQAWVKWRDMPELVLGQQPYLVAGTCS HHCCCCCCCCCCCCCEEHHHHHCHHHHEECCCCHHHHHCCCCEEEEEECC >Mature Secondary Structure PNQTQNSSKDHPYFIPTVFTRHNRFLHALLLDHQAWFCAQDLGRMMGHPLNPRVTLKLD CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEC PDQRRTVRLSKYGKVVETPMVSESGMFALLVHHFIPENRNLRQWLSNEVIPILRETSSVT CCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCEEHHCCCCCC AENCPSLSSMHWAGVTVPLLHWQQQAWVKWRDMPELVLGQQPYLVAGTCS HHCCCCCCCCCCCCCEEHHHHHCHHHHEECCCCHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA