| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457094
Identifier: 77457094
GI number: 77457094
Start: 1013500
End: 1013805
Strand: Direct
Name: 77457094
Synonym: Pfl01_0867
Alternate gene names: NA
Gene position: 1013500-1013805 (Clockwise)
Preceding gene: 77457093
Following gene: 77457095
Centisome position: 15.74
GC content: 62.75
Gene sequence:
>306_bases ATGACCGAGTCGGCCATTCGTCTGGACGAAGCCAGTGAGCTGCAGCTCAGCGGTGTGCTGGATTACCGCACCGGCCCTGA TCTGCGCGAGCAGGGCCGGGCGCTGATCAAGTCGTGCAATGCCCCGGCATTGGTGATCGATTGCTCGGCGGTGGAGAAAT CCAGCAGCGTCGGTCTTTCGCTGCTGCTGTGCTTCATTCGCGATGCCAAGGCCGCCGGCAAGGCGGTCAGCATTCGCGGG ATGCCCGAAGACATGCGCGAAATTGCTCAGGTCAGCGAGCTGACCGAGCTGTTGGCGCAACCCTGA
Upstream 100 bases:
>100_bases TGCAGCGCAATGGCAACGACCTGGACAAGACCATCAACGGCTGGGCCGGGGAAGTCGCCAAGGCCAAACAGTCGGCCGAG CAGAACGAGAAGCCTGCCCA
Downstream 100 bases:
>100_bases ACCCGCATCAGTAGAGAAGCCCCCCGTCAGAGTCCTGCGCAGCGGGGTTCGCAGGCGCGGGGCTTTTTTGTATGATGTCC GACCCGTGCGCACAGGGCGC
Product: anti-sigma-factor antagonist (STAS)
Products: NA
Alternate protein names: STAS Domain-Containing Protein; Luene-Tolerance Protein; STAS Family Protein; STAS Domain Protein; Luene-Tolerance Protein TtgE
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTESAIRLDEASELQLSGVLDYRTGPDLREQGRALIKSCNAPALVIDCSAVEKSSSVGLSLLLCFIRDAKAAGKAVSIRG MPEDMREIAQVSELTELLAQP
Sequences:
>Translated_101_residues MTESAIRLDEASELQLSGVLDYRTGPDLREQGRALIKSCNAPALVIDCSAVEKSSSVGLSLLLCFIRDAKAAGKAVSIRG MPEDMREIAQVSELTELLAQP >Mature_100_residues TESAIRLDEASELQLSGVLDYRTGPDLREQGRALIKSCNAPALVIDCSAVEKSSSVGLSLLLCFIRDAKAAGKAVSIRGM PEDMREIAQVSELTELLAQP
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10820; Mature: 10688
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESAIRLDEASELQLSGVLDYRTGPDLREQGRALIKSCNAPALVIDCSAVEKSSSVGLS CCCCCCCCCCCCCEEECCEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHH LLLCFIRDAKAAGKAVSIRGMPEDMREIAQVSELTELLAQP HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TESAIRLDEASELQLSGVLDYRTGPDLREQGRALIKSCNAPALVIDCSAVEKSSSVGLS CCCCCCCCCCCCEEECCEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHH LLLCFIRDAKAAGKAVSIRGMPEDMREIAQVSELTELLAQP HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA