| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is mlaE [H]
Identifier: 77457091
GI number: 77457091
Start: 1011577
End: 1012374
Strand: Direct
Name: mlaE [H]
Synonym: Pfl01_0864
Alternate gene names: 77457091
Gene position: 1011577-1012374 (Clockwise)
Preceding gene: 77457090
Following gene: 77457092
Centisome position: 15.71
GC content: 58.9
Gene sequence:
>798_bases ATGCGCAGAATTACATTAATGGAGCGTGTGCGTCGCTTTGGCCTCGCCGGAATCGACAGCGTCGCAGTGTTCGGGCGTTC GACCCTGTTCCTGTTTCATGCCTTGCTGGGTCGTGGCGGCATCGGCGGCGGTTTCGGCCTGCTGGTCAAACAGCTGCATT CCGTCGGCGTGATGTCGCTGGTGATCATCGTGGTGTCGGGGATTTTCATCGGCATGGTGCTGGCCCTGCAGGGCTTCAAC ATCCTGTCGAGCTACGGCTCGGAGCAGGCTGTCGGGCAGATGGTGGCGCTGACCCTGTTACGTGAGCTGGGGCCGGTGGT GACCGCGCTGTTGTTTGCCGGTCGTGCCGGTTCGGCGCTGACGGCGGAAATCGGCAACATGAAATCCACCGAACAGCTGT CCAGCCTGGAGATGATAGGGGTCGACCCGCTCAAGTACATCATCGCCCCACGCCTTTGGGCCGGCTTCATTTCCCTGCCG GTACTGGCGATGATCTTCAGTGTGGTCGGCATCTGGGGCGGTTCGTGGGTTGCCGTCGACTGGCTGGGCGTCTACGAAGG TTCCTACTGGTCGAACATGCAGAACAGCGTGAGCTTCGGTGACGATGTGCTCAACGGCATCATCAAAAGTGCAGTATTCG CTTTTGTCGTCACCTGGATCGCCGTATTTCAAGGCTATGACTGCGAACCCACTTCCGAGGGGATCAGTCGTGCCACCACC AAGACCGTGGTTTACGCCTCGCTGGCAGTACTCGGCCTGGACTTTATTCTGACCGCTTTGATGTTTGGAGATTTCTGA
Upstream 100 bases:
>100_bases CGCGTATCCGTCAATTCATGACCGGTGAACCCGACGGCCCGGTGCCGTATCACTTTCCAGCGCCGGATTACCGCGCCGAT CTTCTGGGGAAGCGCCGCTG
Downstream 100 bases:
>100_bases TGCAAAACCGCACCCTGGAAATCGGTGTCGGCCTGTTCCTGCTGGCAGGGATCCTGGCTTTGTTGCTGCTGGCCCTGCGG GTCAGTGGCCTGTCTCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRRITLMERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSLVIIVVSGIFIGMVLALQGFN ILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLP VLAMIFSVVGIWGGSWVAVDWLGVYEGSYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATT KTVVYASLAVLGLDFILTALMFGDF
Sequences:
>Translated_265_residues MRRITLMERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSLVIIVVSGIFIGMVLALQGFN ILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLP VLAMIFSVVGIWGGSWVAVDWLGVYEGSYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATT KTVVYASLAVLGLDFILTALMFGDF >Mature_265_residues MRRITLMERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSLVIIVVSGIFIGMVLALQGFN ILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLP VLAMIFSVVGIWGGSWVAVDWLGVYEGSYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATT KTVVYASLAVLGLDFILTALMFGDF
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=259, Percent_Identity=61.3899613899614, Blast_Score=316, Evalue=1e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 28335; Mature: 28335
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRITLMERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSL CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VIIVVSGIFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSAL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAMIFSVVGIWGGSWVAVD HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH WLGVYEGSYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATT HHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KTVVYASLAVLGLDFILTALMFGDF HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRITLMERVRRFGLAGIDSVAVFGRSTLFLFHALLGRGGIGGGFGLLVKQLHSVGVMSL CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VIIVVSGIFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGRAGSAL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TAEIGNMKSTEQLSSLEMIGVDPLKYIIAPRLWAGFISLPVLAMIFSVVGIWGGSWVAVD HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH WLGVYEGSYWSNMQNSVSFGDDVLNGIIKSAVFAFVVTWIAVFQGYDCEPTSEGISRATT HHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KTVVYASLAVLGLDFILTALMFGDF HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]