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The map label for this gene is rng [H]

Identifier: 77457069

GI number: 77457069

Start: 989737

End: 991215

Strand: Direct

Name: rng [H]

Synonym: Pfl01_0842

Alternate gene names: 77457069

Gene position: 989737-991215 (Clockwise)

Preceding gene: 77457068

Following gene: 77457070

Centisome position: 15.37

GC content: 58.62

Gene sequence:

>1479_bases
ATGCCTGAACGAGACCCTGCCATGAGTGAAGAGATTCTGATCAACATCACGCCGATGGAATCGCGCGTGGCGGTGGTCGA
AAACGGTGTGCTGCAAGAAGTGCACGTCGAGCGTACGCAAAAACGCGGGATCGTCGGCAACATCTATAAAGGCAAGGTGG
TGCGAGTCCTGCCGGGCATGCAGGCGGCCTTCGTCGACATCGGCCTGGATCGTGCTGCCTTCATTCATGCCTCGGAAATT
TCCCTGCGCGAAGGTCCTGCGGTGGAAAGCATCAGTGCGCTTGTACACGAAGGCCAGAGCCTGGTGGTGCAGGTCACCAA
GGATCCGATAGGTTCCAAAGGCGCGCGGCTGACCACGCAGCTGTCGATCCCATCGCGCTATCTGGTGTACATGCCGCGCA
CCGCTCACGTCGGTATTTCTCTGAAGATCGAAGACGAAGCCGAGCGCGAACGCCTCAAGCAGGTAGTCAGCGATTGCGTG
GCCAAAGAAGGCATCAAGGAGGCTGGCGGCTTTATTTTGCGCACCGCCGCCGAAGGTGCCGGGGCCGATGAGATCCTGAT
GGACATCCGCTATCTGCGCCGCCTGTGGGATCAGATCAACGAACAGATCAAGACCATCGGCGCACCGAGCGTGATTTACG
AAGACCTCGGCCTGGCGCTGCGCACCCTGCGCGATCTGGTCAGCCCGAAGATCGAGAAGATCCGCATCGACTCCCGAGAA
ACTTTCCAGAAGACCACGCAGTTCGTCGCCGAACTGATGCCGGAAATCGCCGATCGTCTGGAACACTACCCGGGTGAACG
ACCGATTTTCGACCTGTATGGCGTCGAAGACGAAATCCAGAAGGCCCTGGAGCGCAAGGTGCCGCTGAAGTCTGGCGGTT
ATCTGGTGATCGATCCGGCCGAAGCCATGACCACCATCGATGTGAACACCGGAGCGTTTGTCGGTCATCGCAACCTCGAA
GAAACCATCTTCAAGACCAACCTCGAAGCCGCGACCGCGATTGCCCGGCAGATGCGCCTGCGTAATCTGGGCGGGATCAT
CATCATCGACTTCATCGACATGGAAGACGAAGAGCACCAGCGTCAGGTGCTGCGTACCCTGGAAAAACAACTGGAGCGCG
ATCACGCCAAGACCAACATCATCGGCATCACCGAGTTGGGCCTGGTGCAGATGACGCGCAAGCGCACCCGCGAAAGTCTC
GAGCAGGTGCTGTGCGAACCGTGCAGCAGCTGTCAGGGCCGGGGCAAGCTGAAAACCCCGGAAACCATTTGCTACGAGAT
TTTCCGCGAGATCCTGCGTGAAGCCCGGGCCTATCAGGCCGAGGGGTATCGGGTGCTGGCGAACCAGAAAGTGGTGGATC
GCCTGCTCGATGAAGAGTCCGGTAACGTGGCCGAACTTGAAGGTTTCATCGGGCGCACCATACGCTTCCAGGTGGAAACC
ATGTATTCCCAGGAACAATATGACGTGGTGCTGCTCTGA

Upstream 100 bases:

>100_bases
CGAAAGCGCAGAACTGCTCGGCCATTTCGGCATACCCTGTTGGCAAACGCTGAACGCGCAATGAGCGTCGAACGGACAAG
ATGCGGCCATTATCGTGAAC

Downstream 100 bases:

>100_bases
ATCCCTGCATCACCCTTTTCCTGAAACGGCTGGCCTCAGCTTTTTGCAGTATTTTTGCCATGGGAGCCAACTGACATGGA
ACGTCTGACACGCATTTTGG

Product: RNAse G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MPERDPAMSEEILINITPMESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGMQAAFVDIGLDRAAFIHASEI
SLREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRYLVYMPRTAHVGISLKIEDEAERERLKQVVSDCV
AKEGIKEAGGFILRTAAEGAGADEILMDIRYLRRLWDQINEQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRE
TFQKTTQFVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPAEAMTTIDVNTGAFVGHRNLE
ETIFKTNLEAATAIARQMRLRNLGGIIIIDFIDMEDEEHQRQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESL
EQVLCEPCSSCQGRGKLKTPETICYEIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEGFIGRTIRFQVET
MYSQEQYDVVLL

Sequences:

>Translated_492_residues
MPERDPAMSEEILINITPMESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGMQAAFVDIGLDRAAFIHASEI
SLREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRYLVYMPRTAHVGISLKIEDEAERERLKQVVSDCV
AKEGIKEAGGFILRTAAEGAGADEILMDIRYLRRLWDQINEQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRE
TFQKTTQFVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPAEAMTTIDVNTGAFVGHRNLE
ETIFKTNLEAATAIARQMRLRNLGGIIIIDFIDMEDEEHQRQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESL
EQVLCEPCSSCQGRGKLKTPETICYEIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEGFIGRTIRFQVET
MYSQEQYDVVLL
>Mature_491_residues
PERDPAMSEEILINITPMESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGMQAAFVDIGLDRAAFIHASEIS
LREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRYLVYMPRTAHVGISLKIEDEAERERLKQVVSDCVA
KEGIKEAGGFILRTAAEGAGADEILMDIRYLRRLWDQINEQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRET
FQKTTQFVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPAEAMTTIDVNTGAFVGHRNLEE
TIFKTNLEAATAIARQMRLRNLGGIIIIDFIDMEDEEHQRQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLE
QVLCEPCSSCQGRGKLKTPETICYEIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEGFIGRTIRFQVETM
YSQEQYDVVLL

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=494, Percent_Identity=56.4777327935223, Blast_Score=557, Evalue=1e-160,
Organism=Escherichia coli, GI1787325, Length=465, Percent_Identity=36.1290322580645, Blast_Score=273, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55455; Mature: 55323

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERDPAMSEEILINITPMESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGM
CCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEECCCC
QAAFVDIGLDRAAFIHASEISLREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQ
HHHHHHCCCCCHHEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEE
LSIPSRYLVYMPRTAHVGISLKIEDEAERERLKQVVSDCVAKEGIKEAGGFILRTAAEGA
ECCCCEEEEEECCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
GADEILMDIRYLRRLWDQINEQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHEEECCCHH
TFQKTTQFVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECH
EAMTTIDVNTGAFVGHRNLEETIFKTNLEAATAIARQMRLRNLGGIIIIDFIDMEDEEHQ
HCEEEEECCCCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH
RQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSSCQGRGKLKTP
HHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ETICYEIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEGFIGRTIRFQVET
HHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEE
MYSQEQYDVVLL
HHCCCCCCEEEC
>Mature Secondary Structure 
PERDPAMSEEILINITPMESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGM
CCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCEEEECCCC
QAAFVDIGLDRAAFIHASEISLREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQ
HHHHHHCCCCCHHEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEE
LSIPSRYLVYMPRTAHVGISLKIEDEAERERLKQVVSDCVAKEGIKEAGGFILRTAAEGA
ECCCCEEEEEECCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
GADEILMDIRYLRRLWDQINEQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHEEECCCHH
TFQKTTQFVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVIDPA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEECH
EAMTTIDVNTGAFVGHRNLEETIFKTNLEAATAIARQMRLRNLGGIIIIDFIDMEDEEHQ
HCEEEEECCCCCEEECCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH
RQVLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSSCQGRGKLKTP
HHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ETICYEIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEGFIGRTIRFQVET
HHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEE
MYSQEQYDVVLL
HHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]