| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mreC [H]
Identifier: 77457066
GI number: 77457066
Start: 987481
End: 988569
Strand: Direct
Name: mreC [H]
Synonym: Pfl01_0839
Alternate gene names: 77457066
Gene position: 987481-988569 (Clockwise)
Preceding gene: 77457065
Following gene: 77457067
Centisome position: 15.34
GC content: 63.36
Gene sequence:
>1089_bases GTGCGCTTGTTGGTGCTGGCCGTACTGTCGGTCGCGCTGATGGTCGTTGACGCGCGCTTCAGCCTGCTTAAACCCGTACG CAGCCAGGCCTCGCTGGTGCTGATGGACGCCTACTGGATTACTGACCTGCCCGGACGATTGTGGGAAGGTATCGCCAGCC AGTTCGGCAGTCGCACCGAGCTCGTCGCCGAAAATGAAAAACTCAAGTCGGAGAACCTGCTGTTGCAGGGTCGCATGCAG AAGCTTGCCGCCCTCACCGAGCAGAACGTCCGCCTGCGCGAGTTGCTCAATTCCTCCGCGCTGGTCAACGAGAAGGTCGA AGTGGCCGAGCTGATCGGCATGGACCCCAACCCTTTCACCCATCGCATCATCATCAATAAGGGTGAGCGTGATGGCGTGG TGCTCGGTCAGCCGGTGCTCGATGCTCGCGGCCTGATGGGGCAGGTGGTCGAACTGATGCCGTACACCTCACGTGTGCTG CTGCTGACCGACTCGACCCACAGCATTCCCGTGCAGGTGAACCGTAACGGTCTGCGGGCGATTGCCAGCGGCACCGGTAA CCCTGAGCGTCTGGAACTGCGCCACGTGGCGGACACTGCCGACGTCAAAGAAGGCGATCTACTGGTCAGCTCCGGCCTGG GTCAGCGTTTCCCGGCCGGTTATCCGGTGGCGACGGTCAAGGAAGTCATCCACGATTCCGGCCAGCCTTTCGCCATTGTT CGCGCCGTGCCGACCGCCGCGCTGAACCGCAGCCGTTACCTGCTGCTGGTGTTCAGTGACAACCGCACGGCCGAAGAGCG TGCCAACGATGCCGCGCAGGCTCAGGAAAACCTCGATGCCTTTGGTGGTGGTCCGGTGATTCCTTCCACGGTGCCGAAAA TCGTCACCCCGCCTGCCGCAGCAGCGACTCCTGCCACGGCGACGCCGTCGGCTGCACCTGCTGTCAGCACTACACCGGCC AAACCCGCTGCAAGCAAACCGCCTGCAGCCACACCAGCGGCCAGCAAACCACCGGCGAATCAGCCGGCGGCTCGACCAGC GGCGAAACCGCCAGTCACTGCGCCGGCTACCACCGGGAGGCAAGAATAA
Upstream 100 bases:
>100_bases TCTTCATCCAGGCCGGTTTGATGCCGTATGAATAAACAGAACATTTGCCTGGGAGGAGCGGCTTATTAAACCGCTTTTCG CCAAGGGCCCCTCACTGGGC
Downstream 100 bases:
>100_bases TGGTCGGGGCTACCGCATCGCGTAACGGCTGGATTGTCTGGCTGACGTTTATTGTCGGCATTCTGCTCAGTGTGTCGCCA CTGCCCATTTTCATGGAAAT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MRLLVLAVLSVALMVVDARFSLLKPVRSQASLVLMDAYWITDLPGRLWEGIASQFGSRTELVAENEKLKSENLLLQGRMQ KLAALTEQNVRLRELLNSSALVNEKVEVAELIGMDPNPFTHRIIINKGERDGVVLGQPVLDARGLMGQVVELMPYTSRVL LLTDSTHSIPVQVNRNGLRAIASGTGNPERLELRHVADTADVKEGDLLVSSGLGQRFPAGYPVATVKEVIHDSGQPFAIV RAVPTAALNRSRYLLLVFSDNRTAEERANDAAQAQENLDAFGGGPVIPSTVPKIVTPPAAAATPATATPSAAPAVSTTPA KPAASKPPAATPAASKPPANQPAARPAAKPPVTAPATTGRQE
Sequences:
>Translated_362_residues MRLLVLAVLSVALMVVDARFSLLKPVRSQASLVLMDAYWITDLPGRLWEGIASQFGSRTELVAENEKLKSENLLLQGRMQ KLAALTEQNVRLRELLNSSALVNEKVEVAELIGMDPNPFTHRIIINKGERDGVVLGQPVLDARGLMGQVVELMPYTSRVL LLTDSTHSIPVQVNRNGLRAIASGTGNPERLELRHVADTADVKEGDLLVSSGLGQRFPAGYPVATVKEVIHDSGQPFAIV RAVPTAALNRSRYLLLVFSDNRTAEERANDAAQAQENLDAFGGGPVIPSTVPKIVTPPAAAATPATATPSAAPAVSTTPA KPAASKPPAATPAASKPPANQPAARPAAKPPVTAPATTGRQE >Mature_362_residues MRLLVLAVLSVALMVVDARFSLLKPVRSQASLVLMDAYWITDLPGRLWEGIASQFGSRTELVAENEKLKSENLLLQGRMQ KLAALTEQNVRLRELLNSSALVNEKVEVAELIGMDPNPFTHRIIINKGERDGVVLGQPVLDARGLMGQVVELMPYTSRVL LLTDSTHSIPVQVNRNGLRAIASGTGNPERLELRHVADTADVKEGDLLVSSGLGQRFPAGYPVATVKEVIHDSGQPFAIV RAVPTAALNRSRYLLLVFSDNRTAEERANDAAQAQENLDAFGGGPVIPSTVPKIVTPPAAAATPATATPSAAPAVSTTPA KPAASKPPAATPAASKPPANQPAARPAAKPPVTAPATTGRQE
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=247, Percent_Identity=36.8421052631579, Blast_Score=174, Evalue=9e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 38338; Mature: 38338
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLVLAVLSVALMVVDARFSLLKPVRSQASLVLMDAYWITDLPGRLWEGIASQFGSRTE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCHHHHHHHHHHCCCCCE LVAENEKLKSENLLLQGRMQKLAALTEQNVRLRELLNSSALVNEKVEVAELIGMDPNPFT EHHCCCHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCHHHHHHHHCCCCCCCE HRIIINKGERDGVVLGQPVLDARGLMGQVVELMPYTSRVLLLTDSTHSIPVQVNRNGLRA EEEEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCEE IASGTGNPERLELRHVADTADVKEGDLLVSSGLGQRFPAGYPVATVKEVIHDSGQPFAIV EECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEE RAVPTAALNRSRYLLLVFSDNRTAEERANDAAQAQENLDAFGGGPVIPSTVPKIVTPPAA EECCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AATPATATPSAAPAVSTTPAKPAASKPPAATPAASKPPANQPAARPAAKPPVTAPATTGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QE CC >Mature Secondary Structure MRLLVLAVLSVALMVVDARFSLLKPVRSQASLVLMDAYWITDLPGRLWEGIASQFGSRTE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCHHHHHHHHHHCCCCCE LVAENEKLKSENLLLQGRMQKLAALTEQNVRLRELLNSSALVNEKVEVAELIGMDPNPFT EHHCCCHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCHHHHHHHHCCCCCCCE HRIIINKGERDGVVLGQPVLDARGLMGQVVELMPYTSRVLLLTDSTHSIPVQVNRNGLRA EEEEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCEE IASGTGNPERLELRHVADTADVKEGDLLVSSGLGQRFPAGYPVATVKEVIHDSGQPFAIV EECCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEE RAVPTAALNRSRYLLLVFSDNRTAEERANDAAQAQENLDAFGGGPVIPSTVPKIVTPPAA EECCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AATPATATPSAAPAVSTTPAKPAASKPPAATPAASKPPANQPAARPAAKPPVTAPATTGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]