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The map label for this gene is rnfH

Identifier: 77456985

GI number: 77456985

Start: 890855

End: 891169

Strand: Direct

Name: rnfH

Synonym: Pfl01_0758

Alternate gene names: 77456985

Gene position: 890855-891169 (Clockwise)

Preceding gene: 77456984

Following gene: 77456987

Centisome position: 13.84

GC content: 57.78

Gene sequence:

>315_bases
ATGGTTGAGCCGGTGATTGAAATCGAAGTGGTGTATGCCGCCGTTGATCGTCAGGTTTTGCGTGTAATCAGTGTTGCCGA
GGGTACGACGGTGCGTGCGGCGCTGATGGCGTCCGGGATTGATGCTGAGTTTCCGGAGCTGGATCTGATCAGTTGTCCTT
TGGGGATCTTCGGCAAAGTGATCGCTGATCCTGATGCCCGGCGGGTTCAGGAAGGCGATCGCATCGAGATCTATCGACCG
TTGTTGGCTGATCCGAAAGAGGTGCGCCGTCTGCGTGCCGCCAAGGCTGCCGAAGCCAAGGCGCGAAACCAGTAG

Upstream 100 bases:

>100_bases
GACTACGCCGGGCCGCTGGTCCGCGCGACGCTCGGTCCTTTGTTCAATCAGGCAGCCAATACACTGGTGGATGCGTTCTG
CCAGCGCGCCAAGCAGATGC

Downstream 100 bases:

>100_bases
GGTGGTCGAACGGCAGGCAATAAAAAACCCGGAATTTCCGGGTTTTTTATTGCGTCGCAAATTATTGCGGCGAGGTGTCC
AGCGGTTCTGGCGTTGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MVEPVIEIEVVYAAVDRQVLRVISVAEGTTVRAALMASGIDAEFPELDLISCPLGIFGKVIADPDARRVQEGDRIEIYRP
LLADPKEVRRLRAAKAAEAKARNQ

Sequences:

>Translated_104_residues
MVEPVIEIEVVYAAVDRQVLRVISVAEGTTVRAALMASGIDAEFPELDLISCPLGIFGKVIADPDARRVQEGDRIEIYRP
LLADPKEVRRLRAAKAAEAKARNQ
>Mature_104_residues
MVEPVIEIEVVYAAVDRQVLRVISVAEGTTVRAALMASGIDAEFPELDLISCPLGIFGKVIADPDARRVQEGDRIEIYRP
LLADPKEVRRLRAAKAAEAKARNQ

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family

Homologues:

Organism=Escherichia coli, GI87082139, Length=92, Percent_Identity=44.5652173913043, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFH_PSEPF (Q3KIA5)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_346490.1
- ProteinModelPortal:   Q3KIA5
- SMR:   Q3KIA5
- STRING:   Q3KIA5
- GeneID:   3715216
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_0758
- eggNOG:   COG2914
- HOGENOM:   HBG700644
- OMA:   PKDVRRK
- ProtClustDB:   CLSK2486459
- BioCyc:   PFLU205922:PFL_0758-MONOMER
- HAMAP:   MF_00460
- InterPro:   IPR005346

Pfam domain/function: PF03658 UPF0125

EC number: NA

Molecular weight: Translated: 11412; Mature: 11412

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEPVIEIEVVYAAVDRQVLRVISVAEGTTVRAALMASGIDAEFPELDLISCPLGIFGKV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCHHHHHHH
IADPDARRVQEGDRIEIYRPLLADPKEVRRLRAAKAAEAKARNQ
HCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVEPVIEIEVVYAAVDRQVLRVISVAEGTTVRAALMASGIDAEFPELDLISCPLGIFGKV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCHHHHHHH
IADPDARRVQEGDRIEIYRPLLADPKEVRRLRAAKAAEAKARNQ
HCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA