| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yfjI [H]
Identifier: 77456971
GI number: 77456971
Start: 874247
End: 875647
Strand: Direct
Name: yfjI [H]
Synonym: Pfl01_0744
Alternate gene names: 77456971
Gene position: 874247-875647 (Clockwise)
Preceding gene: 77456968
Following gene: 77456972
Centisome position: 13.58
GC content: 59.6
Gene sequence:
>1401_bases ATGCAGCAGTTAGATCCGAAGCTTGAATTTCCACGATCCCCTCGACCGTTAATCGAGTCGAATCCCGTGGCCCAGTCTTA TCCGGTGCAGGCATTGGGTGGGATTCTTGGGCCAGCTGTTGAGCGCATGGCCGAGGTCATCGGCGTGCCCCAGGCGTTAG CCGCGCAATCGGTGTTGGCTGCCTCGGCGCTGGCCACCCAAGGACATGCGGGCTTACAGCTCGACGGGAGAAGTTATCCC TTGTCGCTATACCTGATCACGGTGGCCGCGTCAGGGGATCGTAAAACTGCGGCGGATCGATGTGCATTGCTCCCAGCCCG GCAATGGGAGCGTGAGCAGTGGCAACACTATCGTGAGCAGCTCTTTCGGTACCGTGCCGCACAGCGACAAGCGCAGCGTA TCAATCCTGCCGATCCCGCTCCCACAAATAGCGTACCGCTCGAAGCGGAGCCTTCGGCCCCTCGGCTGATAACCACAGAC CCGACGATCGAGGCCCTGATCAAGGGGCTCTGCCATGACTTGCCGAGCATGGGGCTGTTCTGTGACGAGGGCGGACAATT CCTCGGCAGCAGCACTATGAGTCGGGACAACCGTTTGAAAGCGGTCACGACCTTGTCGTCACTCTGGGACGGTAGCCCGA TTGATCGTGCTCGCTCTTTGGCAGGCGAAAGCCTACGAGCCTATGACCGACGCCTGAGCCTGCACCTGATGCTGCAACCT TATTTGGCCATGCAGTTACTCAGTGACCCGTTGCTGCAGGGCCAAGGCATTCTCGCCCGCTGCCTGATGACCTGGCCCAC CAGCCTGGCTGGACAACGTAGCTATCAGGCTGTCGACTTGTCCAAAGACGCCGCCTTAAAGCGATATCACCACCGCCTTT CAGCCCTGTTTCATCAGCCTTGGTCACTTTCCGCTGACGGTGCATTGCAGCTATCACCGCTGACCCTCAGTCCGTTGGCC CGCCGTCGCTGGATTGATCTGCATGATGCCATAGAAGCCCAATTGGGTGAGTTTGGGGAACTGGCAAGTGTACGGCCCAG CGGATCGAAGGCCGCCGATAACCTGCTCCGAATCGCCGGCATTTTGGCCGTGGTGGAGGAGAGCCGCACCGTGGAGGTCG ACCATATCCAACGGGCCTCGGCCTTAGTTGGTTACTACCTCACCGAAATCCAGCGCCTGACCGAGCGGGAGCCGGTGAGC CGGGTAAAAGAGGAGGCAGACCGGCTGCTGCGCTGGCTGCAGGTCAAGGAGTGGAATCGCTTCAGTATTCGAGACCTGAA CCGCAACGGTCCCCGCTTTGCCCGCAAGAGCAGTCGTCATGCCGCCAAGCTGCTGGTCGAGTTGATTGATCATCAGTGGT TGATCACTGATGGCCACACCTTCGAGGTGCGCCATGTTTAA
Upstream 100 bases:
>100_bases TGAACACCTCACAGGCCGCAGGGGCCTTGATCCCTGATAACACTCAACAACCGTGGCGGGACTACGTGAGGACAACCAGC AATTACCGAGGAAAGTGCAC
Downstream 100 bases:
>100_bases TCTTGATGAAGCGCTGCGCAACCATCTGGCTCAGCGTCAAAAGGAGCCCAAAGCGCGATTTGTCGCCGCTACTGTCGCCA CTTTGTCGCCACGCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MQQLDPKLEFPRSPRPLIESNPVAQSYPVQALGGILGPAVERMAEVIGVPQALAAQSVLAASALATQGHAGLQLDGRSYP LSLYLITVAASGDRKTAADRCALLPARQWEREQWQHYREQLFRYRAAQRQAQRINPADPAPTNSVPLEAEPSAPRLITTD PTIEALIKGLCHDLPSMGLFCDEGGQFLGSSTMSRDNRLKAVTTLSSLWDGSPIDRARSLAGESLRAYDRRLSLHLMLQP YLAMQLLSDPLLQGQGILARCLMTWPTSLAGQRSYQAVDLSKDAALKRYHHRLSALFHQPWSLSADGALQLSPLTLSPLA RRRWIDLHDAIEAQLGEFGELASVRPSGSKAADNLLRIAGILAVVEESRTVEVDHIQRASALVGYYLTEIQRLTEREPVS RVKEEADRLLRWLQVKEWNRFSIRDLNRNGPRFARKSSRHAAKLLVELIDHQWLITDGHTFEVRHV
Sequences:
>Translated_466_residues MQQLDPKLEFPRSPRPLIESNPVAQSYPVQALGGILGPAVERMAEVIGVPQALAAQSVLAASALATQGHAGLQLDGRSYP LSLYLITVAASGDRKTAADRCALLPARQWEREQWQHYREQLFRYRAAQRQAQRINPADPAPTNSVPLEAEPSAPRLITTD PTIEALIKGLCHDLPSMGLFCDEGGQFLGSSTMSRDNRLKAVTTLSSLWDGSPIDRARSLAGESLRAYDRRLSLHLMLQP YLAMQLLSDPLLQGQGILARCLMTWPTSLAGQRSYQAVDLSKDAALKRYHHRLSALFHQPWSLSADGALQLSPLTLSPLA RRRWIDLHDAIEAQLGEFGELASVRPSGSKAADNLLRIAGILAVVEESRTVEVDHIQRASALVGYYLTEIQRLTEREPVS RVKEEADRLLRWLQVKEWNRFSIRDLNRNGPRFARKSSRHAAKLLVELIDHQWLITDGHTFEVRHV >Mature_466_residues MQQLDPKLEFPRSPRPLIESNPVAQSYPVQALGGILGPAVERMAEVIGVPQALAAQSVLAASALATQGHAGLQLDGRSYP LSLYLITVAASGDRKTAADRCALLPARQWEREQWQHYREQLFRYRAAQRQAQRINPADPAPTNSVPLEAEPSAPRLITTD PTIEALIKGLCHDLPSMGLFCDEGGQFLGSSTMSRDNRLKAVTTLSSLWDGSPIDRARSLAGESLRAYDRRLSLHLMLQP YLAMQLLSDPLLQGQGILARCLMTWPTSLAGQRSYQAVDLSKDAALKRYHHRLSALFHQPWSLSADGALQLSPLTLSPLA RRRWIDLHDAIEAQLGEFGELASVRPSGSKAADNLLRIAGILAVVEESRTVEVDHIQRASALVGYYLTEIQRLTEREPVS RVKEEADRLLRWLQVKEWNRFSIRDLNRNGPRFARKSSRHAAKLLVELIDHQWLITDGHTFEVRHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788978, Length=420, Percent_Identity=27.1428571428571, Blast_Score=137, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51969; Mature: 51969
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLDPKLEFPRSPRPLIESNPVAQSYPVQALGGILGPAVERMAEVIGVPQALAAQSVLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ASALATQGHAGLQLDGRSYPLSLYLITVAASGDRKTAADRCALLPARQWEREQWQHYREQ HHHHHHCCCCCEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHH LFRYRAAQRQAQRINPADPAPTNSVPLEAEPSAPRLITTDPTIEALIKGLCHDLPSMGLF HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEE CDEGGQFLGSSTMSRDNRLKAVTTLSSLWDGSPIDRARSLAGESLRAYDRRLSLHLMLQP ECCCCCHHCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLAMQLLSDPLLQGQGILARCLMTWPTSLAGQRSYQAVDLSKDAALKRYHHRLSALFHQP HHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCC WSLSADGALQLSPLTLSPLARRRWIDLHDAIEAQLGEFGELASVRPSGSKAADNLLRIAG CCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHH ILAVVEESRTVEVDHIQRASALVGYYLTEIQRLTEREPVSRVKEEADRLLRWLQVKEWNR HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC FSIRDLNRNGPRFARKSSRHAAKLLVELIDHQWLITDGHTFEVRHV CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECC >Mature Secondary Structure MQQLDPKLEFPRSPRPLIESNPVAQSYPVQALGGILGPAVERMAEVIGVPQALAAQSVLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ASALATQGHAGLQLDGRSYPLSLYLITVAASGDRKTAADRCALLPARQWEREQWQHYREQ HHHHHHCCCCCEEECCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHH LFRYRAAQRQAQRINPADPAPTNSVPLEAEPSAPRLITTDPTIEALIKGLCHDLPSMGLF HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEE CDEGGQFLGSSTMSRDNRLKAVTTLSSLWDGSPIDRARSLAGESLRAYDRRLSLHLMLQP ECCCCCHHCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLAMQLLSDPLLQGQGILARCLMTWPTSLAGQRSYQAVDLSKDAALKRYHHRLSALFHQP HHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCC WSLSADGALQLSPLTLSPLARRRWIDLHDAIEAQLGEFGELASVRPSGSKAADNLLRIAG CCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHH ILAVVEESRTVEVDHIQRASALVGYYLTEIQRLTEREPVSRVKEEADRLLRWLQVKEWNR HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC FSIRDLNRNGPRFARKSSRHAAKLLVELIDHQWLITDGHTFEVRHV CEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]