| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456965
Identifier: 77456965
GI number: 77456965
Start: 865302
End: 866429
Strand: Direct
Name: 77456965
Synonym: Pfl01_0738
Alternate gene names: NA
Gene position: 865302-866429 (Clockwise)
Preceding gene: 77456961
Following gene: 77456966
Centisome position: 13.44
GC content: 49.47
Gene sequence:
>1128_bases ATGCTAAAATCCTCCGGCATGACTAGTCCATTTTCCTACACGTTTCCAGCCATCCGCGGCGTGCAAGCCGGGCGGGAATT TTACGTCTCCATGTGCCCGTTACGTCTCCTCGCGAAGCTTTTCGTTTTCGACAACGAAGAGCTTATGCCTGAGCTGCGGG CTCAGAGATCCATCAACCGCACGCGCGTTCCTGAAATTGCTCGCTATATCCTCTCTAATACTGATAGTTATACGTTTTCG GCAATCACAGCATCTATAGATGGCAAAGTTGGCTTTGAGCCTGTCGGTACCAACGATACTACTCACTTTCGTATGGGAAC GTTGACTGTCGATATGGATGCCAAGTTTGTCGTGAATGACGGACAGCATCGTCGAGCCGCGATAGAACAGGCACTTGAGG AGCGTCCCGAGTTAGGTGACGAAACCATCGCGGTTGTATTTTTTCATGATCGTGGTCTTGAGCGGTGTCAGCAAATGTTT GCGGACCTCAATAGACACGCAGTGAAGCCTTCACCTTCCCTTAGTGTTCTTTATGATCATCGTAATGCGGCCGCGAGCGT AGCTAAGCACCTTGGGCTTACTTCGCGGGTTTTCCGAAACTTGGTCGAATCGGAGCGATCTTCACTTTCCAAGAGATCTC GCAAGCTTTTCACTCTAAGTGCTTTACACTTTGCCATTCTTGAGATGCTTAGCGCGAAGGACCTAGAAGACTTTACCTGG GCTTCGAAGAGATGCAATGAGTTCTGGGAGGTGGTTGGAGAGCAAATACCCGAATGGACTCATGTACGTGAGAGTCGCAT GACTGCGGGAGAGGTGCGGCAAGATTTCATCCATTCACATGCGATTGTGCTGCAAGCGCTAGGCCGCGTTGGAAAATTTG TTTATCGAACCGCTGATGGTCGCCCGGATCTTAAGTCGGCGCTAAAAAATCTACGCGATATCGATTGGTCGCGAACTAAT AGTGCTACTTGGGAGGGGCGCGCCATGATAGGCGGACGGATGGCTAAGAATAGTCAGAATATTACGTTAACATGCAATCA AATAAAATTCTCGCTTGGTTTGGGTTTGACGCCTGAAGAACAAGTTATAGAAGACGCATTCCTTGCCGCACGTCAGGCCA CAAGCTAA
Upstream 100 bases:
>100_bases ACGGCTGCTACTGGCGTTTCGACACATCAAAATCCCCCCAAAGAAAGCGATATATTGTTTGTGTTATCGAGAGGGCTTGT TTGTTTATTTGCACATAAAC
Downstream 100 bases:
>100_bases TTATCGGAATATACCATGACCACTCCTCCCGAGGCCATTATTGCAGAAATACAAACCCTCTATAGTTCCGACTCCTTGCC TTGGATTGTCGGTTATAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: DGQHR Domain Protein; Thiol Protease Domain-Containing Protein; DGQHR Domain-Containing Protein; DNA Thiolation Protein; Bacteriophage Protein
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MLKSSGMTSPFSYTFPAIRGVQAGREFYVSMCPLRLLAKLFVFDNEELMPELRAQRSINRTRVPEIARYILSNTDSYTFS AITASIDGKVGFEPVGTNDTTHFRMGTLTVDMDAKFVVNDGQHRRAAIEQALEERPELGDETIAVVFFHDRGLERCQQMF ADLNRHAVKPSPSLSVLYDHRNAAASVAKHLGLTSRVFRNLVESERSSLSKRSRKLFTLSALHFAILEMLSAKDLEDFTW ASKRCNEFWEVVGEQIPEWTHVRESRMTAGEVRQDFIHSHAIVLQALGRVGKFVYRTADGRPDLKSALKNLRDIDWSRTN SATWEGRAMIGGRMAKNSQNITLTCNQIKFSLGLGLTPEEQVIEDAFLAARQATS
Sequences:
>Translated_375_residues MLKSSGMTSPFSYTFPAIRGVQAGREFYVSMCPLRLLAKLFVFDNEELMPELRAQRSINRTRVPEIARYILSNTDSYTFS AITASIDGKVGFEPVGTNDTTHFRMGTLTVDMDAKFVVNDGQHRRAAIEQALEERPELGDETIAVVFFHDRGLERCQQMF ADLNRHAVKPSPSLSVLYDHRNAAASVAKHLGLTSRVFRNLVESERSSLSKRSRKLFTLSALHFAILEMLSAKDLEDFTW ASKRCNEFWEVVGEQIPEWTHVRESRMTAGEVRQDFIHSHAIVLQALGRVGKFVYRTADGRPDLKSALKNLRDIDWSRTN SATWEGRAMIGGRMAKNSQNITLTCNQIKFSLGLGLTPEEQVIEDAFLAARQATS >Mature_375_residues MLKSSGMTSPFSYTFPAIRGVQAGREFYVSMCPLRLLAKLFVFDNEELMPELRAQRSINRTRVPEIARYILSNTDSYTFS AITASIDGKVGFEPVGTNDTTHFRMGTLTVDMDAKFVVNDGQHRRAAIEQALEERPELGDETIAVVFFHDRGLERCQQMF ADLNRHAVKPSPSLSVLYDHRNAAASVAKHLGLTSRVFRNLVESERSSLSKRSRKLFTLSALHFAILEMLSAKDLEDFTW ASKRCNEFWEVVGEQIPEWTHVRESRMTAGEVRQDFIHSHAIVLQALGRVGKFVYRTADGRPDLKSALKNLRDIDWSRTN SATWEGRAMIGGRMAKNSQNITLTCNQIKFSLGLGLTPEEQVIEDAFLAARQATS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42300; Mature: 42300
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSSGMTSPFSYTFPAIRGVQAGREFYVSMCPLRLLAKLFVFDNEELMPELRAQRSINR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC TRVPEIARYILSNTDSYTFSAITASIDGKVGFEPVGTNDTTHFRMGTLTVDMDAKFVVND CCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEECCCCCCCEEEEEEEEEECCCEEEECC GQHRRAAIEQALEERPELGDETIAVVFFHDRGLERCQQMFADLNRHAVKPSPSLSVLYDH CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECC RNAAASVAKHLGLTSRVFRNLVESERSSLSKRSRKLFTLSALHFAILEMLSAKDLEDFTW HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ASKRCNEFWEVVGEQIPEWTHVRESRMTAGEVRQDFIHSHAIVLQALGRVGKFVYRTADG HHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC RPDLKSALKNLRDIDWSRTNSATWEGRAMIGGRMAKNSQNITLTCNQIKFSLGLGLTPEE CHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCEECCCCCCEEEEEEEEEEEECCCCCCHH QVIEDAFLAARQATS HHHHHHHHHHHHCCC >Mature Secondary Structure MLKSSGMTSPFSYTFPAIRGVQAGREFYVSMCPLRLLAKLFVFDNEELMPELRAQRSINR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC TRVPEIARYILSNTDSYTFSAITASIDGKVGFEPVGTNDTTHFRMGTLTVDMDAKFVVND CCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEECCCCCCCEEEEEEEEEECCCEEEECC GQHRRAAIEQALEERPELGDETIAVVFFHDRGLERCQQMFADLNRHAVKPSPSLSVLYDH CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECC RNAAASVAKHLGLTSRVFRNLVESERSSLSKRSRKLFTLSALHFAILEMLSAKDLEDFTW HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ASKRCNEFWEVVGEQIPEWTHVRESRMTAGEVRQDFIHSHAIVLQALGRVGKFVYRTADG HHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC RPDLKSALKNLRDIDWSRTNSATWEGRAMIGGRMAKNSQNITLTCNQIKFSLGLGLTPEE CHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCEECCCCCCEEEEEEEEEEEECCCCCCHH QVIEDAFLAARQATS HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA