| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mdtP [H]
Identifier: 77456936
GI number: 77456936
Start: 839060
End: 840511
Strand: Direct
Name: mdtP [H]
Synonym: Pfl01_0708
Alternate gene names: 77456936
Gene position: 839060-840511 (Clockwise)
Preceding gene: 77456935
Following gene: 77456937
Centisome position: 13.03
GC content: 61.16
Gene sequence:
>1452_bases ATGCATTCGATTACACGTTTGATGCTGGCGCCGCTGGCGTCGTCCATCCTGTTGGCGGCCGGTTGTGTGAACTACGCCGG GATCGATCATCAGGGCAAATTGCTGGCGGTCGGCGATGCACCGTCCGACAGCCTGAAAGACAAGCTGCCGCCGGCCCAAT GGCCGCGTGCGGACTGGTGGACATCGCTGGGTGATCCACGTCTGGGTGCTCTGATCGAAGAGGCTTATGCCAGCAACCCG GACTTGCAGGAAGTCGCTGCCCGGGTCGCGAAAGCCAACGCATTTCTCGACCTGCGCGACGCCGAGCGTTATCCGGAAAT GGACGCGTCGGCGGGTGTCACTCGCGGTCGGCTGTCGCGCTTTGAGGACTACAGCGGCGAGGGCCACCAGTACTTCACTG CGCGTAATCTGGCGGTCAATTTCAGCTATACCTTCGACCTCTGGGGCGGCCAGCGTGCCGCCTGGGAATCGGCGCTCAAC AGCGCACGAGCGGCGGAAGTCGATCTGCAATCGTCGCGGCTGATTCTCGCGGTCAACGTGGTCAAGGCTTACAACCAGTT GGCCTATGCGTGGCAGGTCTCGGAGCTCAATCAACGGGATCTTGAACGCCTGAGCAAATTGGTGGAGCTGACGGATTCAC GTTACGGCTCGGGCCTCGACAACCTGTCGCAACTCAAGCAGGTGCAGAGCCTCAAGGCGCGTTCGGAATCGACACTGATC GGCGCTAACGAAGATATCGAAATTGCTCGTCTTCAACTGTCGGCGCTGATCGGCAAGGGCGTTGATCGTGCGCACACCCT GGAGCGGCCATCGAATCTGCAAGCCAGTGTGGTGGCCTTGCCGGCGCAGTTGCCGGCCCAATTGTTGGGCCGTCGTCCGG ACATCGTCGCCGCACGTTGGCGCGTGGAGGCCGAGACTAAAAACGTCGAGGCGGTGAAGACCACGTTCTACCCGAACATC AATCTGGTGGCAGCGGCGGGTTCCCATGCTTTGACCGGCGATGCGCTGTTCGCCGGGGTCAGCAAGTTCTGGAATGTGGC GCCGACGGTGTCGCTGCCGATCTTCGATGCCGGGCGCCTGCGCTCAGATCTCAAGGCCGGCAATGCCGAACTCGACAGCG CCATCGCGCAGTACAACCGGGTGTTGAATTCGGCGCTGCATGAGGTGGCGATTTCGGTCACGCAGCTGCGTTCGTTCGAG CAGCAGATCGTCGTGCAGCGCGATGCCTGTGCGATTGCCCAGTCGTCCTACGATCTGTCGCAGTCGCGCTACAAGGCCGG GGAGGACACGTTTCTCGATGCGCTTAACATCGAGCAACAATTGATTCAGGACGAAATGCGTCTGGCTTTCCTCAACAGCA AGCACATCGACAGTTCGGTTTCGTTGATGGCAGCGCTGGGCGGCGGGTTCCAGGCGCCTTCGCTGGAGACCGCGCAGAGC AGCGATTTGTAG
Upstream 100 bases:
>100_bases GCCGTCGGTGTACACGCTGCTCAGTTCGATCAAGCAACCGAGCCATGCACCCGAAGCCGAGCCGGCCGGTGTGCCGCAAC CCATCCTGTGAGGACGTGAC
Downstream 100 bases:
>100_bases TTGTTTTGCGGGACGCCGCCTCCGGGGCGGCTGTCGCGGGGAAAAAACATCTTGTGTATAGTCTTACTGTTCTCGTATAG ACGAATACAAGCCGGATTTT
Product: RND efflux system outer membrane lipoprotein NodT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MHSITRLMLAPLASSILLAAGCVNYAGIDHQGKLLAVGDAPSDSLKDKLPPAQWPRADWWTSLGDPRLGALIEEAYASNP DLQEVAARVAKANAFLDLRDAERYPEMDASAGVTRGRLSRFEDYSGEGHQYFTARNLAVNFSYTFDLWGGQRAAWESALN SARAAEVDLQSSRLILAVNVVKAYNQLAYAWQVSELNQRDLERLSKLVELTDSRYGSGLDNLSQLKQVQSLKARSESTLI GANEDIEIARLQLSALIGKGVDRAHTLERPSNLQASVVALPAQLPAQLLGRRPDIVAARWRVEAETKNVEAVKTTFYPNI NLVAAAGSHALTGDALFAGVSKFWNVAPTVSLPIFDAGRLRSDLKAGNAELDSAIAQYNRVLNSALHEVAISVTQLRSFE QQIVVQRDACAIAQSSYDLSQSRYKAGEDTFLDALNIEQQLIQDEMRLAFLNSKHIDSSVSLMAALGGGFQAPSLETAQS SDL
Sequences:
>Translated_483_residues MHSITRLMLAPLASSILLAAGCVNYAGIDHQGKLLAVGDAPSDSLKDKLPPAQWPRADWWTSLGDPRLGALIEEAYASNP DLQEVAARVAKANAFLDLRDAERYPEMDASAGVTRGRLSRFEDYSGEGHQYFTARNLAVNFSYTFDLWGGQRAAWESALN SARAAEVDLQSSRLILAVNVVKAYNQLAYAWQVSELNQRDLERLSKLVELTDSRYGSGLDNLSQLKQVQSLKARSESTLI GANEDIEIARLQLSALIGKGVDRAHTLERPSNLQASVVALPAQLPAQLLGRRPDIVAARWRVEAETKNVEAVKTTFYPNI NLVAAAGSHALTGDALFAGVSKFWNVAPTVSLPIFDAGRLRSDLKAGNAELDSAIAQYNRVLNSALHEVAISVTQLRSFE QQIVVQRDACAIAQSSYDLSQSRYKAGEDTFLDALNIEQQLIQDEMRLAFLNSKHIDSSVSLMAALGGGFQAPSLETAQS SDL >Mature_483_residues MHSITRLMLAPLASSILLAAGCVNYAGIDHQGKLLAVGDAPSDSLKDKLPPAQWPRADWWTSLGDPRLGALIEEAYASNP DLQEVAARVAKANAFLDLRDAERYPEMDASAGVTRGRLSRFEDYSGEGHQYFTARNLAVNFSYTFDLWGGQRAAWESALN SARAAEVDLQSSRLILAVNVVKAYNQLAYAWQVSELNQRDLERLSKLVELTDSRYGSGLDNLSQLKQVQSLKARSESTLI GANEDIEIARLQLSALIGKGVDRAHTLERPSNLQASVVALPAQLPAQLLGRRPDIVAARWRVEAETKNVEAVKTTFYPNI NLVAAAGSHALTGDALFAGVSKFWNVAPTVSLPIFDAGRLRSDLKAGNAELDSAIAQYNRVLNSALHEVAISVTQLRSFE QQIVVQRDACAIAQSSYDLSQSRYKAGEDTFLDALNIEQQLIQDEMRLAFLNSKHIDSSVSLMAALGGGFQAPSLETAQS SDL
Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=492, Percent_Identity=27.8455284552846, Blast_Score=178, Evalue=5e-46, Organism=Escherichia coli, GI1786785, Length=426, Percent_Identity=27.4647887323944, Blast_Score=142, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 52598; Mature: 52598
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSITRLMLAPLASSILLAAGCVNYAGIDHQGKLLAVGDAPSDSLKDKLPPAQWPRADWW CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCCCCCCHHH TSLGDPRLGALIEEAYASNPDLQEVAARVAKANAFLDLRDAERYPEMDASAGVTRGRLSR HCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCCCCHHHHHH FEDYSGEGHQYFTARNLAVNFSYTFDLWGGQRAAWESALNSARAAEVDLQSSRLILAVNV HHCCCCCCCEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHCCHHHEEECCCCCEEEEHHH VKAYNQLAYAWQVSELNQRDLERLSKLVELTDSRYGSGLDNLSQLKQVQSLKARSESTLI HHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE GANEDIEIARLQLSALIGKGVDRAHTLERPSNLQASVVALPAQLPAQLLGRRPDIVAARW CCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECHHHHHHHHCCCCCEEEEEE RVEAETKNVEAVKTTFYPNINLVAAAGSHALTGDALFAGVSKFWNVAPTVSLPIFDAGRL EEECCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHH RSDLKAGNAELDSAIAQYNRVLNSALHEVAISVTQLRSFEQQIVVQRDACAIAQSSYDLS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QSRYKAGEDTFLDALNIEQQLIQDEMRLAFLNSKHIDSSVSLMAALGGGFQAPSLETAQS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC SDL CCC >Mature Secondary Structure MHSITRLMLAPLASSILLAAGCVNYAGIDHQGKLLAVGDAPSDSLKDKLPPAQWPRADWW CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCCCCCCHHH TSLGDPRLGALIEEAYASNPDLQEVAARVAKANAFLDLRDAERYPEMDASAGVTRGRLSR HCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCCCCHHHHHH FEDYSGEGHQYFTARNLAVNFSYTFDLWGGQRAAWESALNSARAAEVDLQSSRLILAVNV HHCCCCCCCEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHCCHHHEEECCCCCEEEEHHH VKAYNQLAYAWQVSELNQRDLERLSKLVELTDSRYGSGLDNLSQLKQVQSLKARSESTLI HHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE GANEDIEIARLQLSALIGKGVDRAHTLERPSNLQASVVALPAQLPAQLLGRRPDIVAARW CCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECHHHHHHHHCCCCCEEEEEE RVEAETKNVEAVKTTFYPNINLVAAAGSHALTGDALFAGVSKFWNVAPTVSLPIFDAGRL EEECCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHH RSDLKAGNAELDSAIAQYNRVLNSALHEVAISVTQLRSFEQQIVVQRDACAIAQSSYDLS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QSRYKAGEDTFLDALNIEQQLIQDEMRLAFLNSKHIDSSVSLMAALGGGFQAPSLETAQS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCC SDL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]