| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456927
Identifier: 77456927
GI number: 77456927
Start: 825595
End: 826845
Strand: Direct
Name: 77456927
Synonym: Pfl01_0699
Alternate gene names: NA
Gene position: 825595-826845 (Clockwise)
Preceding gene: 77456926
Following gene: 77456928
Centisome position: 12.82
GC content: 59.23
Gene sequence:
>1251_bases ATGATTTTATTTGCCCCCAATCCAACCGGTTCCGGTCACAACATGCGCGCGCTGTCCATCGCTCAGGCGATCAAGAAACA GCGTCCGGACATGCCATTGACCGTGGCGCTGGCTTCCTTGCAGCCGACCTTCACGCCGATGTTCGAAAAATCTGGTGTTG AAGTTGTGGATATTGCCGGTCGTTTGGTCGATTACTCAAAAAAAAGCAACTTGTCGAAAGAGCTCGACTGGAATAATTAC ATTGGCGGTTATATCGCCAATACTTTCTTGTCCGGCGAGCGGATTCTGTCTTACCTGGCGCTGATCGCCGAGTACAAACC GACGGCTCTGGTGTCGGACTACAACATGGCCGCCTGCCTGGCCGCGATTTTCAGCGGTACGCCGCTGGTGTTCGTCACCG AGCGCTACGACTTCACCCTGTGCCAGCTCGAAGATCATGATCTGGCTGACGGCGGTTTCGAAGTCAACGCGCTGGAAATG GCCCGGGCCCGCACCGCGCTGCACAGCCAGTTCAACTGGATGATCAATCAGAGCCAACTGGTGCTGACCGACAAACCCTA TGTGGCCTCTCTCGATCAGGGCACACCAGTGGCTGAAGCACTGGTCAGCGGCAAGGCGCATTTTGTCGGCCCGATGATCC GCGACATCAATGTGCAGACCGGCTTGAACGTGCGCGAGCAACTGAACCTCGGCGACTCGCCATTCATTGTGGCTTCGATC AGCGGCACCACAATGTTTGCCCAAAACAAGGACGCGCTGCTCGCCGCCTATCTGGACAGCTTCAGGATCCTGCGCGAGCG CAATCCGGAACTGAAACTGGTGCTGCTGGGCCGTCAGGATATCCAGGCTCAGGACGGCGTCGTCTGCGTGCCGTACTACC CGGACTGGATGGGCCTGCTGCGCGAAGCCAGCCTGCTGATTTCGGCGCCGGGCTGGATCACCGTGACGGAAATCGCCGCA CTGCAGATTCCAACGCTGTTCGTGCTGCCGTCCAAATCCGAGTACCACGAACTCGAGGCGCTGCGCCGTCTGGAGCTGCT GGGTTTCCCGACGCACCTGGGCCACGACCGCGATGCGATCGTCGAGCTGATCCAGGGCGAGCTGGAAAAAGACACCGATG CTTCGGCCTACTACGCGCCGCATCAGCAAGTCGCCGCGCCGGATGGCGAAGGTGCCGCCCGCGCCGCGACGCGCATCATT GAGTTGTGCCAGGGCAGCATTGTGTCGCTGACCGAAAGCAAAGCCGCTTAA
Upstream 100 bases:
>100_bases TTGGTGACGGTGCCGTTATCAAACCGTACTCGGTGGTTATAAGGGATGTATTGGAAAACACTGTGGTTCATGGCGTTGTT CAACTAATGGAGATTCAAGA
Downstream 100 bases:
>100_bases CCTCAAGGAAGAGGGATTCACCATGTCACTGCATCCGCAGTTTCTATTTGATCAAGGCCTCAAGGACATCGAGCACGGCG GCTTTTTCGCCGTGACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MILFAPNPTGSGHNMRALSIAQAIKKQRPDMPLTVALASLQPTFTPMFEKSGVEVVDIAGRLVDYSKKSNLSKELDWNNY IGGYIANTFLSGERILSYLALIAEYKPTALVSDYNMAACLAAIFSGTPLVFVTERYDFTLCQLEDHDLADGGFEVNALEM ARARTALHSQFNWMINQSQLVLTDKPYVASLDQGTPVAEALVSGKAHFVGPMIRDINVQTGLNVREQLNLGDSPFIVASI SGTTMFAQNKDALLAAYLDSFRILRERNPELKLVLLGRQDIQAQDGVVCVPYYPDWMGLLREASLLISAPGWITVTEIAA LQIPTLFVLPSKSEYHELEALRRLELLGFPTHLGHDRDAIVELIQGELEKDTDASAYYAPHQQVAAPDGEGAARAATRII ELCQGSIVSLTESKAA
Sequences:
>Translated_416_residues MILFAPNPTGSGHNMRALSIAQAIKKQRPDMPLTVALASLQPTFTPMFEKSGVEVVDIAGRLVDYSKKSNLSKELDWNNY IGGYIANTFLSGERILSYLALIAEYKPTALVSDYNMAACLAAIFSGTPLVFVTERYDFTLCQLEDHDLADGGFEVNALEM ARARTALHSQFNWMINQSQLVLTDKPYVASLDQGTPVAEALVSGKAHFVGPMIRDINVQTGLNVREQLNLGDSPFIVASI SGTTMFAQNKDALLAAYLDSFRILRERNPELKLVLLGRQDIQAQDGVVCVPYYPDWMGLLREASLLISAPGWITVTEIAA LQIPTLFVLPSKSEYHELEALRRLELLGFPTHLGHDRDAIVELIQGELEKDTDASAYYAPHQQVAAPDGEGAARAATRII ELCQGSIVSLTESKAA >Mature_416_residues MILFAPNPTGSGHNMRALSIAQAIKKQRPDMPLTVALASLQPTFTPMFEKSGVEVVDIAGRLVDYSKKSNLSKELDWNNY IGGYIANTFLSGERILSYLALIAEYKPTALVSDYNMAACLAAIFSGTPLVFVTERYDFTLCQLEDHDLADGGFEVNALEM ARARTALHSQFNWMINQSQLVLTDKPYVASLDQGTPVAEALVSGKAHFVGPMIRDINVQTGLNVREQLNLGDSPFIVASI SGTTMFAQNKDALLAAYLDSFRILRERNPELKLVLLGRQDIQAQDGVVCVPYYPDWMGLLREASLLISAPGWITVTEIAA LQIPTLFVLPSKSEYHELEALRRLELLGFPTHLGHDRDAIVELIQGELEKDTDASAYYAPHQQVAAPDGEGAARAATRII ELCQGSIVSLTESKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45590; Mature: 45590
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFAPNPTGSGHNMRALSIAQAIKKQRPDMPLTVALASLQPTFTPMFEKSGVEVVDIAG CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCEEEEHHH RLVDYSKKSNLSKELDWNNYIGGYIANTFLSGERILSYLALIAEYKPTALVSDYNMAACL HHHHCHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEECCCCHHHHH AAIFSGTPLVFVTERYDFTLCQLEDHDLADGGFEVNALEMARARTALHSQFNWMINQSQL HHHHCCCCEEEEEECCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHEEECCCEE VLTDKPYVASLDQGTPVAEALVSGKAHFVGPMIRDINVQTGLNVREQLNLGDSPFIVASI EEECCCCEEECCCCCHHHHHHHCCCCHHCCCHHHEECCCCCCCHHHHCCCCCCCEEEEEE SGTTMFAQNKDALLAAYLDSFRILRERNPELKLVLLGRQDIQAQDGVVCVPYYPDWMGLL CCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHH REASLLISAPGWITVTEIAALQIPTLFVLPSKSEYHELEALRRLELLGFPTHLGHDRDAI HHHHEEEECCCCEEEEEHHHEECCEEEEECCCCHHHHHHHHHHHHHHCCCHHCCCCHHHH VELIQGELEKDTDASAYYAPHQQVAAPDGEGAARAATRIIELCQGSIVSLTESKAA HHHHHHHCCCCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC >Mature Secondary Structure MILFAPNPTGSGHNMRALSIAQAIKKQRPDMPLTVALASLQPTFTPMFEKSGVEVVDIAG CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCEEEEHHH RLVDYSKKSNLSKELDWNNYIGGYIANTFLSGERILSYLALIAEYKPTALVSDYNMAACL HHHHCHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEECCCCHHHHH AAIFSGTPLVFVTERYDFTLCQLEDHDLADGGFEVNALEMARARTALHSQFNWMINQSQL HHHHCCCCEEEEEECCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHEEECCCEE VLTDKPYVASLDQGTPVAEALVSGKAHFVGPMIRDINVQTGLNVREQLNLGDSPFIVASI EEECCCCEEECCCCCHHHHHHHCCCCHHCCCHHHEECCCCCCCHHHHCCCCCCCEEEEEE SGTTMFAQNKDALLAAYLDSFRILRERNPELKLVLLGRQDIQAQDGVVCVPYYPDWMGLL CCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHH REASLLISAPGWITVTEIAALQIPTLFVLPSKSEYHELEALRRLELLGFPTHLGHDRDAI HHHHEEEECCCCEEEEEHHHEECCEEEEECCCCHHHHHHHHHHHHHHCCCHHCCCCHHHH VELIQGELEKDTDASAYYAPHQQVAAPDGEGAARAATRIIELCQGSIVSLTESKAA HHHHHHHCCCCCCCCEEECCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA