| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456862
Identifier: 77456862
GI number: 77456862
Start: 744582
End: 745193
Strand: Direct
Name: 77456862
Synonym: Pfl01_0634
Alternate gene names: NA
Gene position: 744582-745193 (Clockwise)
Preceding gene: 77456861
Following gene: 77456863
Centisome position: 11.56
GC content: 64.87
Gene sequence:
>612_bases ATGAAAGGTCATTCAGGGTTACTGCTGATCTGTCTGGGGTTGGCCGCTTGCCAGGGCAGCAACCCCTACGTAGCGCAGTC GCGACCGTTGCCGCCGGCCCCTCCGCAGGCAGCGACCACTTTCGACCGCAGCGCTTATCCTGCGCCGCCACGGGATTACG GGCGCTATCGCAGTTGGGCGTGGCTCAACGGTCAGTTGCCGCCGGGTACGGCCTGGGCGGATTCGGCGCAAGTGGCCGAA GCCGTCAGCAGTGCGCTGGATCAGCGCGGCTTGCGCCCGCTGCATGACAATCGCCCGGCCGACCTGCTGGTCAGCGCCAA CCTGAGCCTGGAAACCCGCCTGCGTCAGGTGCAGGACGATTACGGTTACTACGGCGGCTACGGCGGATATGACCGTTACG GCCGCGGTTACGGGATGTACAACACGGTGCCGATCGTGCGTACCTACCAGGAACAGGTCGTGGTGGTGCGAGTCGATCTG TTCGACGCCGGCAGTGGTCAGCCGGTCTGGAGCGCCAGCGCCGAAACCGGCACGCAAGGCAAGCAAAGTGATCGCACCGA CGCGATTCGGGAGGCTGTCGAGAAGGCCATGTCGGCGTATCCTCCCAGTTAG
Upstream 100 bases:
>100_bases TTTGCTCGAGATGGAACTCGCCCACCGTCGTCACCCAGGCTTCGCCGGGCTTGGGCGCTACTTGCACTGGATCTGCCGGC CGATCTGATCGGAGCGAGAT
Downstream 100 bases:
>100_bases CTTCTGGCAAATGAGAAGCTCCCTCAGGTTCATGTCTTCCACCGGAGAAAAACCATGTTCCGCCGTCTCGCTTTATTGGC TGTGGCCGCGCTGCTCAGTG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKGHSGLLLICLGLAACQGSNPYVAQSRPLPPAPPQAATTFDRSAYPAPPRDYGRYRSWAWLNGQLPPGTAWADSAQVAE AVSSALDQRGLRPLHDNRPADLLVSANLSLETRLRQVQDDYGYYGGYGGYDRYGRGYGMYNTVPIVRTYQEQVVVVRVDL FDAGSGQPVWSASAETGTQGKQSDRTDAIREAVEKAMSAYPPS
Sequences:
>Translated_203_residues MKGHSGLLLICLGLAACQGSNPYVAQSRPLPPAPPQAATTFDRSAYPAPPRDYGRYRSWAWLNGQLPPGTAWADSAQVAE AVSSALDQRGLRPLHDNRPADLLVSANLSLETRLRQVQDDYGYYGGYGGYDRYGRGYGMYNTVPIVRTYQEQVVVVRVDL FDAGSGQPVWSASAETGTQGKQSDRTDAIREAVEKAMSAYPPS >Mature_203_residues MKGHSGLLLICLGLAACQGSNPYVAQSRPLPPAPPQAATTFDRSAYPAPPRDYGRYRSWAWLNGQLPPGTAWADSAQVAE AVSSALDQRGLRPLHDNRPADLLVSANLSLETRLRQVQDDYGYYGGYGGYDRYGRGYGMYNTVPIVRTYQEQVVVVRVDL FDAGSGQPVWSASAETGTQGKQSDRTDAIREAVEKAMSAYPPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22059; Mature: 22059
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGHSGLLLICLGLAACQGSNPYVAQSRPLPPAPPQAATTFDRSAYPAPPRDYGRYRSWA CCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCEE WLNGQLPPGTAWADSAQVAEAVSSALDQRGLRPLHDNRPADLLVSANLSLETRLRQVQDD EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH YGYYGGYGGYDRYGRGYGMYNTVPIVRTYQEQVVVVRVDLFDAGSGQPVWSASAETGTQG CCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCEEEEEEEEEECCCCCCCEECCCCCCCCC KQSDRTDAIREAVEKAMSAYPPS CCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKGHSGLLLICLGLAACQGSNPYVAQSRPLPPAPPQAATTFDRSAYPAPPRDYGRYRSWA CCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCCCEE WLNGQLPPGTAWADSAQVAEAVSSALDQRGLRPLHDNRPADLLVSANLSLETRLRQVQDD EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH YGYYGGYGGYDRYGRGYGMYNTVPIVRTYQEQVVVVRVDLFDAGSGQPVWSASAETGTQG CCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCEEEEEEEEEECCCCCCCEECCCCCCCCC KQSDRTDAIREAVEKAMSAYPPS CCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA