| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456827
Identifier: 77456827
GI number: 77456827
Start: 692620
End: 693021
Strand: Reverse
Name: 77456827
Synonym: Pfl01_0599
Alternate gene names: NA
Gene position: 693021-692620 (Counterclockwise)
Preceding gene: 77456828
Following gene: 77456826
Centisome position: 10.76
GC content: 63.18
Gene sequence:
>402_bases ATGAACCGACACCGGCTCGCATTTGCCTGGATCGCCTGCTTTGCAGTGCTGTTCAACATGCTCGCCATGCCGTTGACGGG AGCGATGGCGCAGGCGGCGCAGACACCGGCCGAGCAGTTGCTGTGGAGCAGTTTCTGCACCGGCAGCGGGACGAAGATGG TGGCGATCGACATCGGCAGCCTCGATCAGAAAGCGCCGCAGAGTGGTGACCATCATTCGACCATGCAGCATTGCTGGTGC TGTTCCGGATCGGCGCCGGTGGTGGCGTTGCCGGGGCATTCGCCGCAGCTGTATTTCGCTCGATACGAAAGCAATCGCAG CGTGGCGCCCGTCGTGCTGCAAACTCCGACACCGCGCCAGCAATGGCCGAGCCTCAATCCCCGCGCCTCTCCTCTGGTCT GA
Upstream 100 bases:
>100_bases ATGTAGCGCTGCGACACCAAACCGCACGACGCTTTTTTACTTATCGGCCCTGATCAGGCTAAATAGCCGCGCCTGATCGC CCACCCTACGGATCTGTCCC
Downstream 100 bases:
>100_bases TTTGTTCCCGCATTTGACCTGCGTTTCAAATCGTTCTGGAGAGCTGCCATGTTGAACAAATTCATCGTCATCGCTGCGCT GTTGCTGCCTGCGTGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNRHRLAFAWIACFAVLFNMLAMPLTGAMAQAAQTPAEQLLWSSFCTGSGTKMVAIDIGSLDQKAPQSGDHHSTMQHCWC CSGSAPVVALPGHSPQLYFARYESNRSVAPVVLQTPTPRQQWPSLNPRASPLV
Sequences:
>Translated_133_residues MNRHRLAFAWIACFAVLFNMLAMPLTGAMAQAAQTPAEQLLWSSFCTGSGTKMVAIDIGSLDQKAPQSGDHHSTMQHCWC CSGSAPVVALPGHSPQLYFARYESNRSVAPVVLQTPTPRQQWPSLNPRASPLV >Mature_133_residues MNRHRLAFAWIACFAVLFNMLAMPLTGAMAQAAQTPAEQLLWSSFCTGSGTKMVAIDIGSLDQKAPQSGDHHSTMQHCWC CSGSAPVVALPGHSPQLYFARYESNRSVAPVVLQTPTPRQQWPSLNPRASPLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14452; Mature: 14452
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRHRLAFAWIACFAVLFNMLAMPLTGAMAQAAQTPAEQLLWSSFCTGSGTKMVAIDIGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCC LDQKAPQSGDHHSTMQHCWCCSGSAPVVALPGHSPQLYFARYESNRSVAPVVLQTPTPRQ CCCCCCCCCCCCHHHHHHEECCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCHH QWPSLNPRASPLV HCCCCCCCCCCCC >Mature Secondary Structure MNRHRLAFAWIACFAVLFNMLAMPLTGAMAQAAQTPAEQLLWSSFCTGSGTKMVAIDIGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCC LDQKAPQSGDHHSTMQHCWCCSGSAPVVALPGHSPQLYFARYESNRSVAPVVLQTPTPRQ CCCCCCCCCCCCHHHHHHEECCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEECCCCHH QWPSLNPRASPLV HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA