| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is braD [H]
Identifier: 77456817
GI number: 77456817
Start: 679786
End: 681288
Strand: Reverse
Name: braD [H]
Synonym: Pfl01_0589
Alternate gene names: 77456817
Gene position: 681288-679786 (Counterclockwise)
Preceding gene: 77456818
Following gene: 77456816
Centisome position: 10.58
GC content: 65.07
Gene sequence:
>1503_bases ATGCCCACTGCCCTTTACCGCTTGATCCTGGCCGTCGCACTTTTGCTGCCGATGGCCGTCCATGCCGGGGATGCGGAAGA CTTCGTCGCCGCCAACCCGATGCAACAGGCCAAACTGCTGGAAGCCTGGGCCGCGCAGCCCGATCCGGCGCGTGGCGAAC TGATCAACGCCCTGCAACAAGGCGAACTGACCGTCGACGGCCAACCCAAGACCCTGCGCCTGAACAACCGCCTGCGGGGT CTGATCGACACCGCGCTGGCCAGCCACCAGTTGCTCGCCGCCGACGCCAAAACCCGTCTGACTGCCGCGCAGCAATTGCA GAAAAGCGCCAAACCGGCGCAGCTGAAATTCCTCGACCGGCAACTGGCTGGCGAAATCGATGAAAGCGTCCACGCCGCCC TGAGCCTGGCACTGGCCAACCTGCAACTGGTCGACACTGACCCGGCGGTGCGCCTCGCGGCCGTGCGTCTGCTCGGTGAA ACCGGCGACCCGCTGGCTCGCACCCGCCTCGAAGGCTTGCTCGAACCCGGCATCGAAACCGATGCCAACGTGCGCACCGC CGCCGAAACCAGCCTCGCCCAGGTCAAGCGCAAACTGCTGGTCGGCGAACTGCTCGGCCAGGCGTTCAGCGGTATGTCCC TCGGTTCGATTCTGCTGCTCGCGGCACTCGGCCTGGCGATCACCTTCGGCCTGCTCGGCGTGATCAACATGGCCCACGGC GAGATGCTGATGCTCGGCGCCTACTCGACCTACGTCGTGCAGTTGATGTTCCAGCGCTACGCCCCGCAGGCCATCGAGTT CTATCCACTGATTGCGCTGCCGGTGGCGTTCTTCGTCACGGCCGCCATCGGCATGGCCCTGGAGCGCACGGTGATCCGTC ACCTCTACGGCCGCCCGCTGGAAACCCTGCTCGCCACCTGGGGCATCAGCCTGATGCTGATTCAGCTGGTGCGTCTGGTG TTCGGTGCGCAAAACGTGGAAGTGGCAAATCCGGCATGGCTGTCCGGCGGGATTCAGGTGTTGCCGAATCTGGTGCTGCC GTACAACCGCATCGTGATCATCGCCTTCGCCTTGTTTGTGGTGGTGCTGACCTGGCTGCTGCTGAACAAGACCCGCCTCG GTCTGAACGTGCGTGCCGTCACCCAGAACCGCAACATGGCCGCCTGCTGCGGCGTGCCCACCGGGCGCGTCGACATGCTC GCCTTCGGCCTCGGCTCGGGCATTGCCGGGCTCGGCGGCGTGGCGCTGAGCCAGATCGGCAACGTCGGCCCGGACCTCGG CCAGAGCTACATCATCGACTCGTTCCTGGTGGTGGTGCTCGGCGGCGTCGGCCAACTGGCCGGCAGCGTGTTCGCCGCGT TCGGCCTGGGCATCGCCAACAAGATTCTCGAACCGCAGATCGGTGCGGTGCTCGGCAAGATCCTGATCCTCGCGCTGATC ATTCTGTTCATCCAGAAACGTCCGCAAGGCCTCTTCGCACTGAAAGGACGGGTGATCGACTGA
Upstream 100 bases:
>100_bases GCCTCAATGGACGCTCTGCGTCCGCTTTTGGGACGCGGAGCGTCCCGGGCTGCATTCCCACGCGGAGCGTGGGAACGATC ACTACGCAAGGCCATTTCAT
Downstream 100 bases:
>100_bases TGAACCAGCCTCTACTAGTCACGGCCACGCAAAAGGCCGGCCCCAAAGTCACCCTCGCCGTCGGCGTGGTCGTTCTCGCG TTGCTGATCGCCCTGCCGCT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MPTALYRLILAVALLLPMAVHAGDAEDFVAANPMQQAKLLEAWAAQPDPARGELINALQQGELTVDGQPKTLRLNNRLRG LIDTALASHQLLAADAKTRLTAAQQLQKSAKPAQLKFLDRQLAGEIDESVHAALSLALANLQLVDTDPAVRLAAVRLLGE TGDPLARTRLEGLLEPGIETDANVRTAAETSLAQVKRKLLVGELLGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHG EMLMLGAYSTYVVQLMFQRYAPQAIEFYPLIALPVAFFVTAAIGMALERTVIRHLYGRPLETLLATWGISLMLIQLVRLV FGAQNVEVANPAWLSGGIQVLPNLVLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDML AFGLGSGIAGLGGVALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKILEPQIGAVLGKILILALI ILFIQKRPQGLFALKGRVID
Sequences:
>Translated_500_residues MPTALYRLILAVALLLPMAVHAGDAEDFVAANPMQQAKLLEAWAAQPDPARGELINALQQGELTVDGQPKTLRLNNRLRG LIDTALASHQLLAADAKTRLTAAQQLQKSAKPAQLKFLDRQLAGEIDESVHAALSLALANLQLVDTDPAVRLAAVRLLGE TGDPLARTRLEGLLEPGIETDANVRTAAETSLAQVKRKLLVGELLGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHG EMLMLGAYSTYVVQLMFQRYAPQAIEFYPLIALPVAFFVTAAIGMALERTVIRHLYGRPLETLLATWGISLMLIQLVRLV FGAQNVEVANPAWLSGGIQVLPNLVLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDML AFGLGSGIAGLGGVALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKILEPQIGAVLGKILILALI ILFIQKRPQGLFALKGRVID >Mature_499_residues PTALYRLILAVALLLPMAVHAGDAEDFVAANPMQQAKLLEAWAAQPDPARGELINALQQGELTVDGQPKTLRLNNRLRGL IDTALASHQLLAADAKTRLTAAQQLQKSAKPAQLKFLDRQLAGEIDESVHAALSLALANLQLVDTDPAVRLAAVRLLGET GDPLARTRLEGLLEPGIETDANVRTAAETSLAQVKRKLLVGELLGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHGE MLMLGAYSTYVVQLMFQRYAPQAIEFYPLIALPVAFFVTAAIGMALERTVIRHLYGRPLETLLATWGISLMLIQLVRLVF GAQNVEVANPAWLSGGIQVLPNLVLPYNRIVIIAFALFVVVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLA FGLGSGIAGLGGVALSQIGNVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKILEPQIGAVLGKILILALII LFIQKRPQGLFALKGRVID
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=293, Percent_Identity=27.6450511945392, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 53131; Mature: 53000
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTALYRLILAVALLLPMAVHAGDAEDFVAANPMQQAKLLEAWAAQPDPARGELINALQQ CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHC GELTVDGQPKTLRLNNRLRGLIDTALASHQLLAADAKTRLTAAQQLQKSAKPAQLKFLDR CCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QLAGEIDESVHAALSLALANLQLVDTDPAVRLAAVRLLGETGDPLARTRLEGLLEPGIET HHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC DANVRTAAETSLAQVKRKLLVGELLGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC EMLMLGAYSTYVVQLMFQRYAPQAIEFYPLIALPVAFFVTAAIGMALERTVIRHLYGRPL CEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ETLLATWGISLMLIQLVRLVFGAQNVEVANPAWLSGGIQVLPNLVLPYNRIVIIAFALFV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHH VVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGLGSGIAGLGGVALSQIG HHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHC NVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKILEPQIGAVLGKILILALI CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ILFIQKRPQGLFALKGRVID HHHHHCCCCCEEEECCCCCC >Mature Secondary Structure PTALYRLILAVALLLPMAVHAGDAEDFVAANPMQQAKLLEAWAAQPDPARGELINALQQ CHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHC GELTVDGQPKTLRLNNRLRGLIDTALASHQLLAADAKTRLTAAQQLQKSAKPAQLKFLDR CCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QLAGEIDESVHAALSLALANLQLVDTDPAVRLAAVRLLGETGDPLARTRLEGLLEPGIET HHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC DANVRTAAETSLAQVKRKLLVGELLGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC EMLMLGAYSTYVVQLMFQRYAPQAIEFYPLIALPVAFFVTAAIGMALERTVIRHLYGRPL CEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ETLLATWGISLMLIQLVRLVFGAQNVEVANPAWLSGGIQVLPNLVLPYNRIVIIAFALFV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHH VVLTWLLLNKTRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGLGSGIAGLGGVALSQIG HHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHC NVGPDLGQSYIIDSFLVVVLGGVGQLAGSVFAAFGLGIANKILEPQIGAVLGKILILALI CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ILFIQKRPQGLFALKGRVID HHHHHCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]