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The map label for this gene is ureD

Identifier: 77456813

GI number: 77456813

Start: 676135

End: 676974

Strand: Reverse

Name: ureD

Synonym: Pfl01_0585

Alternate gene names: 77456813

Gene position: 676974-676135 (Counterclockwise)

Preceding gene: 77456814

Following gene: 77456812

Centisome position: 10.51

GC content: 64.76

Gene sequence:

>840_bases
ATGAACTTACCTGTTGCGACTGCCCTGTTTACCCCGAGCTGGCATGCCGAGCTTGAGCTGGCCTATGCCCGCTTCGGCGA
TTGCACGCGCCCTACCCGTCGTCGCCACCTCGGTCCGCTGCGGGTGCAAAAGCATCTGTACGCCGAAGGGCCCGAGGTCT
GCCAGCACATCATTGTCCACCCGCCGGGCGGGATTGCCGGCGGTGACCGGCTCGACATCAGCGCCCGCGTCGCACAAGGC
GCCTGGGCACAGATCACCAGCCCCGGCGCGGCCAAGTGGTATCGCGCGGCGGGGCCCGCTTATCAGTCACTGAACCTGCA
TGTCGCTGATGGCGCGACACTGGAATGGCTGCCCCAGGAAACCATCGTCTACAGCGCCGCCCAGGCTGAACTCACGACAT
CGATTGAGCTTGAAGGCGATGCGCGGCTGTTCTACTGGGACGTGGTAGCCCTCGGGCGGCCGGCCAGTGGCGAGCGTTTC
GACCTCGGGCATTTCCAGGCACATCTGGATATTCGCCGTGATGGCCGGTTGTTGTGGCATGAGCGCCAGCGCATCGTTGG
CGCTGACGGCTTGCTTGATTCGCCGATCGGGCTGGATGGCCATCCGGTGTTTGCGACCTTGCTGGTGACCGGTGAGATCG
ATGCTGAATTGCTGGAACGCTGCCGCTCGCTGGGCCACGAAGTGCGCGGGGATCTGACGCAATTGCCCGGTCTTTTGGTC
GCCCGTTGCCTGGCCAGTGAAGCGTTGCTGGCGCGGGCGTGGCTGATCGATCTGTGGCGATTGCTCAGGCCTGCGCTGCT
TGGCCGCGAAGCCCTGCCCCCCCGAATCTGGAACACCTGA

Upstream 100 bases:

>100_bases
CGAGATCGTGCAGCAGGGCCGTGGAGAAAATATGGAAAGCGAGGGTGTACGCGGACTGGTTACGATCTAACCTGTAGCGT
CCTAACGATAATCAGAAAAC

Downstream 100 bases:

>100_bases
TTTTCTTCAACTGCCGACAATGGATTTCAAACGATGGACCTGACCCCACGCGAAAAAGACAAGCTGCTGATCTTCACCGC
CGGCCTCGTGGCCGAGCGGC

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNLPVATALFTPSWHAELELAYARFGDCTRPTRRRHLGPLRVQKHLYAEGPEVCQHIIVHPPGGIAGGDRLDISARVAQG
AWAQITSPGAAKWYRAAGPAYQSLNLHVADGATLEWLPQETIVYSAAQAELTTSIELEGDARLFYWDVVALGRPASGERF
DLGHFQAHLDIRRDGRLLWHERQRIVGADGLLDSPIGLDGHPVFATLLVTGEIDAELLERCRSLGHEVRGDLTQLPGLLV
ARCLASEALLARAWLIDLWRLLRPALLGREALPPRIWNT

Sequences:

>Translated_279_residues
MNLPVATALFTPSWHAELELAYARFGDCTRPTRRRHLGPLRVQKHLYAEGPEVCQHIIVHPPGGIAGGDRLDISARVAQG
AWAQITSPGAAKWYRAAGPAYQSLNLHVADGATLEWLPQETIVYSAAQAELTTSIELEGDARLFYWDVVALGRPASGERF
DLGHFQAHLDIRRDGRLLWHERQRIVGADGLLDSPIGLDGHPVFATLLVTGEIDAELLERCRSLGHEVRGDLTQLPGLLV
ARCLASEALLARAWLIDLWRLLRPALLGREALPPRIWNT
>Mature_279_residues
MNLPVATALFTPSWHAELELAYARFGDCTRPTRRRHLGPLRVQKHLYAEGPEVCQHIIVHPPGGIAGGDRLDISARVAQG
AWAQITSPGAAKWYRAAGPAYQSLNLHVADGATLEWLPQETIVYSAAQAELTTSIELEGDARLFYWDVVALGRPASGERF
DLGHFQAHLDIRRDGRLLWHERQRIVGADGLLDSPIGLDGHPVFATLLVTGEIDAELLERCRSLGHEVRGDLTQLPGLLV
ARCLASEALLARAWLIDLWRLLRPALLGREALPPRIWNT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_PSEPF (Q3KIS7)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_346318.1
- STRING:   Q3KIS7
- GeneID:   3712303
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_0585
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   VQRPLYP
- ProtClustDB:   CLSK868952
- BioCyc:   PFLU205922:PFL_0585-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 30833; Mature: 30833

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPVATALFTPSWHAELELAYARFGDCTRPTRRRHLGPLRVQKHLYAEGPEVCQHIIVH
CCCCCEEEEECCCCCCCEEEEEHHCCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHEEEEE
PPGGIAGGDRLDISARVAQGAWAQITSPGAAKWYRAAGPAYQSLNLHVADGATLEWLPQE
CCCCCCCCCEEEEEHHHHCCCCEECCCCCCHHHHHHCCCCCCEEEEEEECCCEEEECCCH
TIVYSAAQAELTTSIELEGDARLFYWDVVALGRPASGERFDLGHFQAHLDIRRDGRLLWH
HHEEEHHHHEEEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCEEEEEEECCCCEEEEE
ERQRIVGADGLLDSPIGLDGHPVFATLLVTGEIDAELLERCRSLGHEVRGDLTQLPGLLV
HHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
ARCLASEALLARAWLIDLWRLLRPALLGREALPPRIWNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNLPVATALFTPSWHAELELAYARFGDCTRPTRRRHLGPLRVQKHLYAEGPEVCQHIIVH
CCCCCEEEEECCCCCCCEEEEEHHCCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHEEEEE
PPGGIAGGDRLDISARVAQGAWAQITSPGAAKWYRAAGPAYQSLNLHVADGATLEWLPQE
CCCCCCCCCEEEEEHHHHCCCCEECCCCCCHHHHHHCCCCCCEEEEEEECCCEEEECCCH
TIVYSAAQAELTTSIELEGDARLFYWDVVALGRPASGERFDLGHFQAHLDIRRDGRLLWH
HHEEEHHHHEEEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCEEEEEEECCCCEEEEE
ERQRIVGADGLLDSPIGLDGHPVFATLLVTGEIDAELLERCRSLGHEVRGDLTQLPGLLV
HHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
ARCLASEALLARAWLIDLWRLLRPALLGREALPPRIWNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA