| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yncA [H]
Identifier: 77456811
GI number: 77456811
Start: 675256
End: 675789
Strand: Reverse
Name: yncA [H]
Synonym: Pfl01_0583
Alternate gene names: 77456811
Gene position: 675789-675256 (Counterclockwise)
Preceding gene: 77456812
Following gene: 77456810
Centisome position: 10.5
GC content: 64.98
Gene sequence:
>534_bases ATGACCTACACCATCCGCGATGCCCTGCACGCTGACCTGCCGGCGATCCGCGACATCTACAACGACGCGGTGCTCAACAC TACGGCGATCTGGAACGAGTCCCCAGTCGATCTCGGCAACCGTCAGGCGTGGTTCAGCGCGCGCCAGGCCCAGGGTTATC CGATCCTGGTGATCGTCGACGCCGACAACACCACACTCGGCTACGCTTCGTTCGGTGACTGGCGACCGTTCGACGGTTTC CGCCACACCGTCGAGCACTCGGTCTACGTGCGCAGCGACCAGCGCGGCAATGGCCTCGGCCCGCAACTGATGACCGCGCT GATCGAACGCGCGAAAACCTGCGACAAGCACGTCATGGTCGCCGCCATCGAAAGCGGCAACGCCGCATCGATCCGCCTGC ACGAGCGCGCCGGTTTCATCACCACCGGGCAGATGCCCCAGGTCGGCACCAAGTTCGGCCGCTGGCTCGACCTGACGTTC ATGCAACTGACCCTCAATCCTGGCGCGGAGCCGCCGCCCGCCAACAAGGAGTGA
Upstream 100 bases:
>100_bases AGGCATCCCGGAAATGATCCCGGAGATCCAGGTCGAAGCGACGTTTCCCGACGGCACCAAACTGGTCACCGTCCACCAAC CGATCGTCTGAGGCCGTGCC
Downstream 100 bases:
>100_bases CACCGATGAACCCCGCCCAACTGCGACGCGTCAATGCGGAAAGTTTTGCGCACTATCGTCAGGGCCTGATCGAGCTGCTG CTGGACGCCGTGGGTTATGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTYTIRDALHADLPAIRDIYNDAVLNTTAIWNESPVDLGNRQAWFSARQAQGYPILVIVDADNTTLGYASFGDWRPFDGF RHTVEHSVYVRSDQRGNGLGPQLMTALIERAKTCDKHVMVAAIESGNAASIRLHERAGFITTGQMPQVGTKFGRWLDLTF MQLTLNPGAEPPPANKE
Sequences:
>Translated_177_residues MTYTIRDALHADLPAIRDIYNDAVLNTTAIWNESPVDLGNRQAWFSARQAQGYPILVIVDADNTTLGYASFGDWRPFDGF RHTVEHSVYVRSDQRGNGLGPQLMTALIERAKTCDKHVMVAAIESGNAASIRLHERAGFITTGQMPQVGTKFGRWLDLTF MQLTLNPGAEPPPANKE >Mature_176_residues TYTIRDALHADLPAIRDIYNDAVLNTTAIWNESPVDLGNRQAWFSARQAQGYPILVIVDADNTTLGYASFGDWRPFDGFR HTVEHSVYVRSDQRGNGLGPQLMTALIERAKTCDKHVMVAAIESGNAASIRLHERAGFITTGQMPQVGTKFGRWLDLTFM QLTLNPGAEPPPANKE
Specific function: Unknown
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787719, Length=168, Percent_Identity=62.5, Blast_Score=217, Evalue=3e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 19630; Mature: 19499
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTIRDALHADLPAIRDIYNDAVLNTTAIWNESPVDLGNRQAWFSARQAQGYPILVIVD CEEECCHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEEE ADNTTLGYASFGDWRPFDGFRHTVEHSVYVRSDQRGNGLGPQLMTALIERAKTCDKHVMV CCCCEEEECCCCCCCCCCHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEE AAIESGNAASIRLHERAGFITTGQMPQVGTKFGRWLDLTFMQLTLNPGAEPPPANKE EEEECCCEEEEEEECCCCEEECCCCCCHHHHHCCEEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TYTIRDALHADLPAIRDIYNDAVLNTTAIWNESPVDLGNRQAWFSARQAQGYPILVIVD EEECCHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEEE ADNTTLGYASFGDWRPFDGFRHTVEHSVYVRSDQRGNGLGPQLMTALIERAKTCDKHVMV CCCCEEEECCCCCCCCCCHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEE AAIESGNAASIRLHERAGFITTGQMPQVGTKFGRWLDLTFMQLTLNPGAEPPPANKE EEEECCCEEEEEEECCCCEEECCCCCCHHHHHCCEEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]