| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456767
Identifier: 77456767
GI number: 77456767
Start: 625377
End: 627956
Strand: Reverse
Name: 77456767
Synonym: Pfl01_0539
Alternate gene names: NA
Gene position: 627956-625377 (Counterclockwise)
Preceding gene: 77456772
Following gene: 77456759
Centisome position: 9.75
GC content: 58.6
Gene sequence:
>2580_bases ATGCCTGCAAAACCACCCTCCATAGGCGTCACGACCGTCGAAGTGCACAATCCGCCTTCGAGACCTGTGACCGGACATTT TCCGGAGCACTCCACTTCGCCTCCGGTTCCTGCGGACACCCGCCTGTTCACGCCGCGTCCCGCACACGCCAGCCTCCCGG CAATCGACGGCCCGGACACGATCTCTCCCGCACCGTCCGTGACATTCGCCGAAAGCCTCTCAAACCCGACGGCTTCACCG AGAAGACTCAGGCTCGAAACCTATGGCATTCCTTCCGGTGTCCGACTGCCGGAGGCCGACACACAGGGTTTCAGAACCTT CAAGGGGCGACTGTTCGTCGAAGCGTACGATGGCAGCATTGTGCAAGTTGGCCTGGACCCTGAAAGCCGCATCTACCGCA TCAGACTCAGCAATGAGTTGAACCCCTCGGGCCCTGTTCTCTTGCAGGATCCCCAGAGCAAACGCTGGTATCCACTGGAT GAGTTCCAAGCCGGGCCCCTTGCACTGACTTCCAGTCGACTGGACGCATTCCGGACAGGCCTGGATTTCTCTGGCATCGC GCCGGACAGCGAGGGGCTGCACAACTTCGAAGGCAAGCGCTACGTGGTCATTGAAAGCCGCGCCTATCAGGTGATGCGCG ACGTTGACGCCTCCTCTCCCGCGCACACCGTCTGGCGCATCGTCGCGTCGAAGGATCCGGTCGCCTCCGACAGCGAAAAC ACCTACCGCGCCAGTCGGGCCGGCTCCACCCTGGCCATCACTCGCACTGCCGAAGGTTTTTGGGTTCCCAGTCTGCATGG GCTCAAGGGAGGCATGCGTCGCAGTGCAATCGCTCAGCACAACAAAACCTATCTGCTCCAACGGCATGAGCCCATCAGGA ATGCCTTCGATGCCCTGACCGCTTCCAACACGCGCTATGGCGAACTCTGGCGCCGTGCCCAACCCTTGCCTGAGGGCAGT GACGCCGAAAAGGCCGCGCTGATCGAGATCGAAGTGCATGTGATCAAGCACACAAGAATGCAGGCCGATTACGTCAAGTC ACTCATCGACAACCGGGACTGGCTGATATTGCTCAAGGCAGGCGGACTCTATAAAGCCGAGCTTCATGCTCAGCAGATCA ACAGAATCGACTACTTCAACAAACTGCTTGCAGTCATGGACCGCAGAGCTCTGCCAACCCTGCATGCAATCACCGTCGAG TCGCTCAAGCGCAACCTCGTCCACCTCGACAAAAAGCTGAAGATCATGGACGAGCGTCAGACCGTGATGGATCAGATTCA GAAGGCTGACCGCAGCGCCCTGGCGGTTCTGGAGGAGATGAATCGCAAAGTGCCCACGGTGGATCAGATCCAATCCAGCC AATACAACATTTGCCTGCGCCTGATCTCCGACGATCCGCAGAATCCGCAGGATCACGGCATGCGCAGTGCCATGGCCATG CACTTGCTCAAGCAGGATCTGAACGAAGTCTTCGGGTACTCCGAACCTCTTGCATTGCAATTGACGATCGAAAACATCAA AAGCGACAAAGCAGGCCTGGAGGCATTGCTCGCGTCGACAACGCCGGCCAAGGCAGAGTACGTCAGGAAGGCACTGACCC TGCTCGATGCCTTTGAATCGAAAATCGAAACCCGGCTGAACGATATCTTTGACCGGATTGACAACAACCAAGAACTGCCC GGCTACGATCAGGAAATCGATTTCGACTTCCTCCCTGGACAAGTTACCGGAGCCGCCGGAGACGCGGCGCCGCGAAAGTT GTTCCGAACCCGTCAAAATGGCACTTACCGTGTGCTGGTCGGCGTGCCGGACACCGCTGCCGACGGCCGCATCACCCTCA GCGTTCCCGACCTGTTCAAACCGAACGATCCCCCTCAACGCTACGAAATGAAAGAAGGTGAGTGGCAGCCCGTACGTTCC GCCCCGGCCCCGACCTCCAGACCTCAGCTGGTCAGCGAAGCGCTGGCGCGCCTTGGTAACGTGGAGGCGTACCTGGCCCA GGCTCGATTGATGGAAAGCCGAAAGGACAACCCGACCACCATTGTCGAATATCTGGGTGCCGAGACGGATCGACTCGCAG GTCTGGCGAAACACCTCGAGCTCCTCGGGCAAACGGCAGCAGGCGCTGAAACCTCCCACTTGATCAGCCGACTGAAAGCT GCCGCCGACTCAATGGGCGCCAAAGGCCAGGATATTTTGATACGGATGTACAAAAACAAGGATGTGCTGGACGTCCCGCG CCTGAACTTCCTGCTTGAGCATGCTCAACTCAAGGTGGTCAAAACGGTGGAGCGCAAGCAACTGGGCAAGGGTAAAGACA AGTCATTCCTGGACGTTTACTCGATCATCGACCGCTCGGATAACACGCCCTTGTGGGAGGCCCACTTTCACTACGACAGG CAGGACCGCGCTGCGCTGGATTACACCGTCAAGGGCGCACACCTGAAAACCCTTGAACAGCGCAGGCTCGGCAGCTCGTT TCAACAGCGCGAAGAACAGGCTGGTCGGCCCCACCAACGGATATGGCGGGAGTTCATCAGCCCCAGGGTTGCCCAGAAAC TGTTTGATCAGCTGACGTGA
Upstream 100 bases:
>100_bases TTTGACCAATTCCGACGACTGTGGTCGGTTTCTCGTCGCACCGCCCGCCGCCACGCTCTCTGTTCAACAAACGGGTTCAC TTATTCAAGGATGAATACGC
Downstream 100 bases:
>100_bases TCAATTGCGTTACTCGTCGTCGTCGAAGTTGTAACTGCCCGGCGCGAGGTTTTCGAAACGTGTGTATTTGCCGATGAAAG CCAGGCGAATGAAGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 859; Mature: 858
Protein sequence:
>859_residues MPAKPPSIGVTTVEVHNPPSRPVTGHFPEHSTSPPVPADTRLFTPRPAHASLPAIDGPDTISPAPSVTFAESLSNPTASP RRLRLETYGIPSGVRLPEADTQGFRTFKGRLFVEAYDGSIVQVGLDPESRIYRIRLSNELNPSGPVLLQDPQSKRWYPLD EFQAGPLALTSSRLDAFRTGLDFSGIAPDSEGLHNFEGKRYVVIESRAYQVMRDVDASSPAHTVWRIVASKDPVASDSEN TYRASRAGSTLAITRTAEGFWVPSLHGLKGGMRRSAIAQHNKTYLLQRHEPIRNAFDALTASNTRYGELWRRAQPLPEGS DAEKAALIEIEVHVIKHTRMQADYVKSLIDNRDWLILLKAGGLYKAELHAQQINRIDYFNKLLAVMDRRALPTLHAITVE SLKRNLVHLDKKLKIMDERQTVMDQIQKADRSALAVLEEMNRKVPTVDQIQSSQYNICLRLISDDPQNPQDHGMRSAMAM HLLKQDLNEVFGYSEPLALQLTIENIKSDKAGLEALLASTTPAKAEYVRKALTLLDAFESKIETRLNDIFDRIDNNQELP GYDQEIDFDFLPGQVTGAAGDAAPRKLFRTRQNGTYRVLVGVPDTAADGRITLSVPDLFKPNDPPQRYEMKEGEWQPVRS APAPTSRPQLVSEALARLGNVEAYLAQARLMESRKDNPTTIVEYLGAETDRLAGLAKHLELLGQTAAGAETSHLISRLKA AADSMGAKGQDILIRMYKNKDVLDVPRLNFLLEHAQLKVVKTVERKQLGKGKDKSFLDVYSIIDRSDNTPLWEAHFHYDR QDRAALDYTVKGAHLKTLEQRRLGSSFQQREEQAGRPHQRIWREFISPRVAQKLFDQLT
Sequences:
>Translated_859_residues MPAKPPSIGVTTVEVHNPPSRPVTGHFPEHSTSPPVPADTRLFTPRPAHASLPAIDGPDTISPAPSVTFAESLSNPTASP RRLRLETYGIPSGVRLPEADTQGFRTFKGRLFVEAYDGSIVQVGLDPESRIYRIRLSNELNPSGPVLLQDPQSKRWYPLD EFQAGPLALTSSRLDAFRTGLDFSGIAPDSEGLHNFEGKRYVVIESRAYQVMRDVDASSPAHTVWRIVASKDPVASDSEN TYRASRAGSTLAITRTAEGFWVPSLHGLKGGMRRSAIAQHNKTYLLQRHEPIRNAFDALTASNTRYGELWRRAQPLPEGS DAEKAALIEIEVHVIKHTRMQADYVKSLIDNRDWLILLKAGGLYKAELHAQQINRIDYFNKLLAVMDRRALPTLHAITVE SLKRNLVHLDKKLKIMDERQTVMDQIQKADRSALAVLEEMNRKVPTVDQIQSSQYNICLRLISDDPQNPQDHGMRSAMAM HLLKQDLNEVFGYSEPLALQLTIENIKSDKAGLEALLASTTPAKAEYVRKALTLLDAFESKIETRLNDIFDRIDNNQELP GYDQEIDFDFLPGQVTGAAGDAAPRKLFRTRQNGTYRVLVGVPDTAADGRITLSVPDLFKPNDPPQRYEMKEGEWQPVRS APAPTSRPQLVSEALARLGNVEAYLAQARLMESRKDNPTTIVEYLGAETDRLAGLAKHLELLGQTAAGAETSHLISRLKA AADSMGAKGQDILIRMYKNKDVLDVPRLNFLLEHAQLKVVKTVERKQLGKGKDKSFLDVYSIIDRSDNTPLWEAHFHYDR QDRAALDYTVKGAHLKTLEQRRLGSSFQQREEQAGRPHQRIWREFISPRVAQKLFDQLT >Mature_858_residues PAKPPSIGVTTVEVHNPPSRPVTGHFPEHSTSPPVPADTRLFTPRPAHASLPAIDGPDTISPAPSVTFAESLSNPTASPR RLRLETYGIPSGVRLPEADTQGFRTFKGRLFVEAYDGSIVQVGLDPESRIYRIRLSNELNPSGPVLLQDPQSKRWYPLDE FQAGPLALTSSRLDAFRTGLDFSGIAPDSEGLHNFEGKRYVVIESRAYQVMRDVDASSPAHTVWRIVASKDPVASDSENT YRASRAGSTLAITRTAEGFWVPSLHGLKGGMRRSAIAQHNKTYLLQRHEPIRNAFDALTASNTRYGELWRRAQPLPEGSD AEKAALIEIEVHVIKHTRMQADYVKSLIDNRDWLILLKAGGLYKAELHAQQINRIDYFNKLLAVMDRRALPTLHAITVES LKRNLVHLDKKLKIMDERQTVMDQIQKADRSALAVLEEMNRKVPTVDQIQSSQYNICLRLISDDPQNPQDHGMRSAMAMH LLKQDLNEVFGYSEPLALQLTIENIKSDKAGLEALLASTTPAKAEYVRKALTLLDAFESKIETRLNDIFDRIDNNQELPG YDQEIDFDFLPGQVTGAAGDAAPRKLFRTRQNGTYRVLVGVPDTAADGRITLSVPDLFKPNDPPQRYEMKEGEWQPVRSA PAPTSRPQLVSEALARLGNVEAYLAQARLMESRKDNPTTIVEYLGAETDRLAGLAKHLELLGQTAAGAETSHLISRLKAA ADSMGAKGQDILIRMYKNKDVLDVPRLNFLLEHAQLKVVKTVERKQLGKGKDKSFLDVYSIIDRSDNTPLWEAHFHYDRQ DRAALDYTVKGAHLKTLEQRRLGSSFQQREEQAGRPHQRIWREFISPRVAQKLFDQLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96175; Mature: 96044
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKPPSIGVTTVEVHNPPSRPVTGHFPEHSTSPPVPADTRLFTPRPAHASLPAIDGPDT CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC ISPAPSVTFAESLSNPTASPRRLRLETYGIPSGVRLPEADTQGFRTFKGRLFVEAYDGSI CCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHEECCEEEEEEECCCE VQVGLDPESRIYRIRLSNELNPSGPVLLQDPQSKRWYPLDEFQAGPLALTSSRLDAFRTG EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCHHHCCCCCEEEEHHHHHHHHCC LDFSGIAPDSEGLHNFEGKRYVVIESRAYQVMRDVDASSPAHTVWRIVASKDPVASDSEN CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCCCC TYRASRAGSTLAITRTAEGFWVPSLHGLKGGMRRSAIAQHNKTYLLQRHEPIRNAFDALT CEEHHCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHH ASNTRYGELWRRAQPLPEGSDAEKAALIEIEVHVIKHTRMQADYVKSLIDNRDWLILLKA CCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEC GGLYKAELHAQQINRIDYFNKLLAVMDRRALPTLHAITVESLKRNLVHLDKKLKIMDERQ CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVMDQIQKADRSALAVLEEMNRKVPTVDQIQSSQYNICLRLISDDPQNPQDHGMRSAMAM HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHH HLLKQDLNEVFGYSEPLALQLTIENIKSDKAGLEALLASTTPAKAEYVRKALTLLDAFES HHHHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KIETRLNDIFDRIDNNQELPGYDQEIDFDFLPGQVTGAAGDAAPRKLFRTRQNGTYRVLV HHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEE GVPDTAADGRITLSVPDLFKPNDPPQRYEMKEGEWQPVRSAPAPTSRPQLVSEALARLGN ECCCCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC VEAYLAQARLMESRKDNPTTIVEYLGAETDRLAGLAKHLELLGQTAAGAETSHLISRLKA HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AADSMGAKGQDILIRMYKNKDVLDVPRLNFLLEHAQLKVVKTVERKQLGKGKDKSFLDVY HHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH SIIDRSDNTPLWEAHFHYDRQDRAALDYTVKGAHLKTLEQRRLGSSFQQREEQAGRPHQR HHHHCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCHHHH IWREFISPRVAQKLFDQLT HHHHHHCHHHHHHHHHHCC >Mature Secondary Structure PAKPPSIGVTTVEVHNPPSRPVTGHFPEHSTSPPVPADTRLFTPRPAHASLPAIDGPDT CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC ISPAPSVTFAESLSNPTASPRRLRLETYGIPSGVRLPEADTQGFRTFKGRLFVEAYDGSI CCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHEECCEEEEEEECCCE VQVGLDPESRIYRIRLSNELNPSGPVLLQDPQSKRWYPLDEFQAGPLALTSSRLDAFRTG EEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCHHHCCCCCEEEEHHHHHHHHCC LDFSGIAPDSEGLHNFEGKRYVVIESRAYQVMRDVDASSPAHTVWRIVASKDPVASDSEN CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCCCC TYRASRAGSTLAITRTAEGFWVPSLHGLKGGMRRSAIAQHNKTYLLQRHEPIRNAFDALT CEEHHCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHH ASNTRYGELWRRAQPLPEGSDAEKAALIEIEVHVIKHTRMQADYVKSLIDNRDWLILLKA CCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEC GGLYKAELHAQQINRIDYFNKLLAVMDRRALPTLHAITVESLKRNLVHLDKKLKIMDERQ CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVMDQIQKADRSALAVLEEMNRKVPTVDQIQSSQYNICLRLISDDPQNPQDHGMRSAMAM HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHH HLLKQDLNEVFGYSEPLALQLTIENIKSDKAGLEALLASTTPAKAEYVRKALTLLDAFES HHHHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH KIETRLNDIFDRIDNNQELPGYDQEIDFDFLPGQVTGAAGDAAPRKLFRTRQNGTYRVLV HHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEE GVPDTAADGRITLSVPDLFKPNDPPQRYEMKEGEWQPVRSAPAPTSRPQLVSEALARLGN ECCCCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC VEAYLAQARLMESRKDNPTTIVEYLGAETDRLAGLAKHLELLGQTAAGAETSHLISRLKA HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AADSMGAKGQDILIRMYKNKDVLDVPRLNFLLEHAQLKVVKTVERKQLGKGKDKSFLDVY HHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH SIIDRSDNTPLWEAHFHYDRQDRAALDYTVKGAHLKTLEQRRLGSSFQQREEQAGRPHQR HHHHCCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHCCCHHHH IWREFISPRVAQKLFDQLT HHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA