Click here to switch to the map view.

The map label for this gene is ycdQ [C]

Identifier: 77456706

GI number: 77456706

Start: 553435

End: 554337

Strand: Direct

Name: ycdQ [C]

Synonym: Pfl01_0478

Alternate gene names: 77456706

Gene position: 553435-554337 (Clockwise)

Preceding gene: 77456705

Following gene: 77456709

Centisome position: 8.6

GC content: 58.03

Gene sequence:

>903_bases
ATGAGCGATTCAGCAGCCACGAGCGCTGAGCAACCTCTCGTTACCGTCATCATTGCGTCCTACAACCACGGACCGTACAT
CGAGGAGAGCATCCTCAGCGTCATCAACCAGAGCTACAAGAACATCGAGCTGCTGGTCGTCGACGACGGATCGAAAGATG
ACAGTGTCGAGCGCATCAATGCCCTGCAGGCCCAATACGGCTTCGATTTCCGGGTGCAGCAGAACCAGGGCCTGACCAAT
ACGCTCAACGGCGCGATCGCTCGGGCCAAGGGCAGCCTGATCGTGCCGTTCGGTTCCGACGACATCATGTACCCGGACCG
GATCGACACCCAGGTCGCTTATATGGACGGCAAACCGGAAGTGGGTATCTGCGCCGGCAACATCGAATTGATGGACGCTG
ACGGCAATCTCTATCCGGAAAAGCGTCAGCGCCGGGACGTGCCGTTCCGGCGCCTGGATTTTGATGACATGTTCCTGGAG
CGCAAGCCGTATCCGCCGGCGCCGACCCTGATGATCCGCCGTGAGGCACTGGACAAGGTGGGCGGGTTCGACCCGACGAT
TCGTCTTGAAGATCTGTACATCGAGCTGAAAATCACCCGCGCCGGTTACTTCATCGATGGTCTGAACGTGGTGATGGCGC
GCTATCGCAAGCACGCCACCAACTCCTACAAGAATCACCGTTTCATGATCGAGAACATCCTGCGTACCTACGCGTTGTTC
AGCGATCATCCGCTGTACGACGAAGTGCGCTACAAGTCGCTCAACTCGATGTTCCTGAAGACTGCCAACCGCGACCGCAA
ACTGGCGCGGGAACTGCTGGCGCAAATCCCGTTCAAGGCCTGGAACAAGAAGACCTGGCGCGGGTTGGGCCGGTTGCTGT
TTTCGCCGCTGGAAAAAGATTGA

Upstream 100 bases:

>100_bases
CCTACCGCTATTTGCAGGAACAGCACGACATCGAGGTCTTCCGCCAGGAATACCTGAACCTGATCGACTCCGGCCTGGAA
CAGGCCCGCAAGGAACAGCC

Downstream 100 bases:

>100_bases
GGTCGTTGTCGCTCGCACTCAGCGAGCGACTTTTTCCGACAGGTGCTTGCTGCCCTTCTGACGCTGGCGAATCCACTGCA
CCACTTTCTTGCCCGCGTTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSDSAATSAEQPLVTVIIASYNHGPYIEESILSVINQSYKNIELLVVDDGSKDDSVERINALQAQYGFDFRVQQNQGLTN
TLNGAIARAKGSLIVPFGSDDIMYPDRIDTQVAYMDGKPEVGICAGNIELMDADGNLYPEKRQRRDVPFRRLDFDDMFLE
RKPYPPAPTLMIRREALDKVGGFDPTIRLEDLYIELKITRAGYFIDGLNVVMARYRKHATNSYKNHRFMIENILRTYALF
SDHPLYDEVRYKSLNSMFLKTANRDRKLARELLAQIPFKAWNKKTWRGLGRLLFSPLEKD

Sequences:

>Translated_300_residues
MSDSAATSAEQPLVTVIIASYNHGPYIEESILSVINQSYKNIELLVVDDGSKDDSVERINALQAQYGFDFRVQQNQGLTN
TLNGAIARAKGSLIVPFGSDDIMYPDRIDTQVAYMDGKPEVGICAGNIELMDADGNLYPEKRQRRDVPFRRLDFDDMFLE
RKPYPPAPTLMIRREALDKVGGFDPTIRLEDLYIELKITRAGYFIDGLNVVMARYRKHATNSYKNHRFMIENILRTYALF
SDHPLYDEVRYKSLNSMFLKTANRDRKLARELLAQIPFKAWNKKTWRGLGRLLFSPLEKD
>Mature_299_residues
SDSAATSAEQPLVTVIIASYNHGPYIEESILSVINQSYKNIELLVVDDGSKDDSVERINALQAQYGFDFRVQQNQGLTNT
LNGAIARAKGSLIVPFGSDDIMYPDRIDTQVAYMDGKPEVGICAGNIELMDADGNLYPEKRQRRDVPFRRLDFDDMFLER
KPYPPAPTLMIRREALDKVGGFDPTIRLEDLYIELKITRAGYFIDGLNVVMARYRKHATNSYKNHRFMIENILRTYALFS
DHPLYDEVRYKSLNSMFLKTANRDRKLARELLAQIPFKAWNKKTWRGLGRLLFSPLEKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 34417; Mature: 34286

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSAATSAEQPLVTVIIASYNHGPYIEESILSVINQSYKNIELLVVDDGSKDDSVERIN
CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
ALQAQYGFDFRVQQNQGLTNTLNGAIARAKGSLIVPFGSDDIMYPDRIDTQVAYMDGKPE
HHHHHHCCEEEEECCCCCCHHHHHHHEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCC
VGICAGNIELMDADGNLYPEKRQRRDVPFRRLDFDDMFLERKPYPPAPTLMIRREALDKV
EEEEECCEEEEECCCCCCCCHHHHCCCCCEECCHHHHHHCCCCCCCCCHHHHHHHHHHHH
GGFDPTIRLEDLYIELKITRAGYFIDGLNVVMARYRKHATNSYKNHRFMIENILRTYALF
CCCCCCEEEEEEEEEEEEEECCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SDHPLYDEVRYKSLNSMFLKTANRDRKLARELLAQIPFKAWNKKTWRGLGRLLFSPLEKD
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDSAATSAEQPLVTVIIASYNHGPYIEESILSVINQSYKNIELLVVDDGSKDDSVERIN
CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
ALQAQYGFDFRVQQNQGLTNTLNGAIARAKGSLIVPFGSDDIMYPDRIDTQVAYMDGKPE
HHHHHHCCEEEEECCCCCCHHHHHHHEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCC
VGICAGNIELMDADGNLYPEKRQRRDVPFRRLDFDDMFLERKPYPPAPTLMIRREALDKV
EEEEECCEEEEECCCCCCCCHHHHCCCCCEECCHHHHHHCCCCCCCCCHHHHHHHHHHHH
GGFDPTIRLEDLYIELKITRAGYFIDGLNVVMARYRKHATNSYKNHRFMIENILRTYALF
CCCCCCEEEEEEEEEEEEEECCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SDHPLYDEVRYKSLNSMFLKTANRDRKLARELLAQIPFKAWNKKTWRGLGRLLFSPLEKD
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA