| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456659
Identifier: 77456659
GI number: 77456659
Start: 491021
End: 491623
Strand: Reverse
Name: 77456659
Synonym: Pfl01_0431
Alternate gene names: NA
Gene position: 491623-491021 (Counterclockwise)
Preceding gene: 77456660
Following gene: 77456658
Centisome position: 7.64
GC content: 61.36
Gene sequence:
>603_bases ATGAATGTGTTTCTGAAATCCCTCGGGGCCCTGGCGCTGCTGACGCTGTCGTCACTGGCCAACGCCTTCGACCTGCAACA GTTGAGCGAGCAACTGGCGAAGCCGGACGTGATCCACGGCCAGTTCATCCAGGAAAAACACCTGCGTGCCCTGCCCCAGC CGCTGATCAGCAAGGGCAGCTTCGTGCTGGCGAAAAACCACGGTTTGCTCTGGCTGCTGAAAACCCCGCTGCAACAGGAT TACCGCATCAGCGCCAAGGGCATCGCCCGACGTGATGCCACCGGCTGGCAACTGCTGCCGAACAAGAGTGCCGGTGCCGA ACAGAACCGACTGTTCCTCGCCGTGCTGCAAGGCGACAGCAGCGGTCTGCAACGGGATTTCGAACTGGCCCTGAGCGGCG ATGCGCAGAAATGGCAACTGACCCTGACCCCGCGTTCGGTGCTGCTCAAGCAGGTCTTCAACCAGATCAACATCAGCGGC GGCACGTTGGTGAACACCATCGAACTGCTGGAAACCCAGGGCGACAGCACCGTGCTGCGCATGCAGGACAGCACCGCCGG CCAACCTCTGAGCGACGCGGAGCAACATGACTTTGCCGAGTGA
Upstream 100 bases:
>100_bases CCCGCGCCAGCTCGGTGCAGGTCGCCGTCGAAGTCAGCAGCCGCGAGATGCAACTGGCTTCGCCGAAAGTCTTCACCGAT GCCGTGGAAAGGATGCTGCG
Downstream 100 bases:
>100_bases ACGCAGGCTGCCCTGGCTGTTCCTGATCCTGCTGCTGGCGGTCGTCGCACTGGGCGCCTGGCAGTGGCGCGACGGAGCGC CGTTGTCGGCCAACCTGATG
Product: Outer membrane lipoprotein carrier protein LolA
Products: NA
Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Flagellum-Specific ATP Synthase; Outer Membrane Lipocarrier Protein LolA Family Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MNVFLKSLGALALLTLSSLANAFDLQQLSEQLAKPDVIHGQFIQEKHLRALPQPLISKGSFVLAKNHGLLWLLKTPLQQD YRISAKGIARRDATGWQLLPNKSAGAEQNRLFLAVLQGDSSGLQRDFELALSGDAQKWQLTLTPRSVLLKQVFNQINISG GTLVNTIELLETQGDSTVLRMQDSTAGQPLSDAEQHDFAE
Sequences:
>Translated_200_residues MNVFLKSLGALALLTLSSLANAFDLQQLSEQLAKPDVIHGQFIQEKHLRALPQPLISKGSFVLAKNHGLLWLLKTPLQQD YRISAKGIARRDATGWQLLPNKSAGAEQNRLFLAVLQGDSSGLQRDFELALSGDAQKWQLTLTPRSVLLKQVFNQINISG GTLVNTIELLETQGDSTVLRMQDSTAGQPLSDAEQHDFAE >Mature_200_residues MNVFLKSLGALALLTLSSLANAFDLQQLSEQLAKPDVIHGQFIQEKHLRALPQPLISKGSFVLAKNHGLLWLLKTPLQQD YRISAKGIARRDATGWQLLPNKSAGAEQNRLFLAVLQGDSSGLQRDFELALSGDAQKWQLTLTPRSVLLKQVFNQINISG GTLVNTIELLETQGDSTVLRMQDSTAGQPLSDAEQHDFAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21968; Mature: 21968
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFLKSLGALALLTLSSLANAFDLQQLSEQLAKPDVIHGQFIQEKHLRALPQPLISKGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCCC FVLAKNHGLLWLLKTPLQQDYRISAKGIARRDATGWQLLPNKSAGAEQNRLFLAVLQGDS EEEEECCCEEEEECCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCC SGLQRDFELALSGDAQKWQLTLTPRSVLLKQVFNQINISGGTLVNTIELLETQGDSTVLR CCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEE MQDSTAGQPLSDAEQHDFAE EECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNVFLKSLGALALLTLSSLANAFDLQQLSEQLAKPDVIHGQFIQEKHLRALPQPLISKGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCCC FVLAKNHGLLWLLKTPLQQDYRISAKGIARRDATGWQLLPNKSAGAEQNRLFLAVLQGDS EEEEECCCEEEEECCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCC SGLQRDFELALSGDAQKWQLTLTPRSVLLKQVFNQINISGGTLVNTIELLETQGDSTVLR CCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEE MQDSTAGQPLSDAEQHDFAE EECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA