| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is glgP [H]
Identifier: 77456577
GI number: 77456577
Start: 394306
End: 396756
Strand: Direct
Name: glgP [H]
Synonym: Pfl01_0349
Alternate gene names: 77456577
Gene position: 394306-396756 (Clockwise)
Preceding gene: 77456575
Following gene: 77456578
Centisome position: 6.12
GC content: 62.79
Gene sequence:
>2451_bases ATGACTCAAGAACCACTAGTTCGCGAAGCAGAGGTGGCCGCATTCCGCGACGCCGTCCTGACCAAACTCACCTACGCGGT GGGCAAAGACCCGGATCACGCCTTCGACCATGACTGGTTCGAAGCCATCGCCCTGGCGGCGCGCGATCACATGGTCGAGC ACTGGATGGACCACACCCGGCAGATTTACCGCAAAGGCCAGAAGCGGGTGTATTACCTCTCGCTGGAATTCCTCATCGGG CGCCTGCTGTACGACAGCCTGAGCAACCTCGGTTTGCTGGACGTCGCCCGTGAAGCCTTGACCGAGCTGGGCGTCGATCT GGAGCGCATCCGCATCCTGGAGCCGGATGCGGCGCTGGGCAACGGTGGCCTCGGACGGTTGGCGGCATGCTTCATGGAAA GCATGTCGACCCTCGGCATCGCCGGCCATGGCTATGGCATTCGTTATGAACACGGGCTGTTCCGTCAGGCCATCGTCGAC GGTTGGCAACAGGAGCAGACCGAGCACTGGCTGGATTTCGGCAACCCCTGGGAGTTCGAGCGGCCGGAGGTGGTCTATCC GATCGGCTTTGGCGGCAGCGTCGAGACCGTCACCGACGCCAATGGCAACTCCCGGCAGGTCTGGCACCCGGCGGAAACCG TCCGGGCGATTGCCTACGACACCCCAGTGGTCGGCTGGCGCGGGGCGAGCGTCAATACCTTGCGCCTGTGGCGGGCCCGA GCGATGGAGGACTTGCACCTGGAGCGCTTCAACGCCGGCGACCACCTGGGCGCCGTCGCCGAAGTGGCCCGGGCCGAAAG TATCTCCCGCGTGCTCTACCCGGCGGACAGCACCGAAGCCGGGCAGGAACTGCGCCTGCGTCAGGAATACTTCTTCGTCG CCGCCTCGCTTCAGGACCTGCTGCGCCGTCATCGCAACATGCACACCTCGGTGCTGACCCTCGGCGATCACGCGGCGATC CAGCTCAACGACACCCACCCTTCGATCGCCGTCGCCGAACTGATGCGCCAACTGGTCGATGTCTACGACGTGGCCTGGGA CGCGGCGTGGCAAGTGACTGTCGATACGCTGTCGTACACCAACCACACGCTGCTCCCCGAAGCGCTGGAAACCTGGCCGG TGGGGCTGATGGAACGCATGCTGCCGCGGCACATGCAGATCATTTACCTGATCAACGCCCAGCACATCGATTCGCTGCGG GCCAAGGGCATCCACGATTTCGACGTGCTGCGCGCGGTGTCGCTGATCGAGGAAGACAACGGGCGCCGGGTGCGCATGGG CAACCTCGCGTTCCTCGGCTCCCACAGCGTCAACGGCGTGTCCGGGCTGCACACGCAACTGATGCGCAAAACCGTGTTCG CTGAACTGCACAAGCTGTATCCGGAGCGAATCAACAACAAGACCAACGGCATCACCTTCCGCCGCTGGCTGTACCAGGCC AACCCGGAGTTGACCTCGATGCTGGTCGATGCCCTTGGCCCGGACGTTCTGGATAACCCCGAAGAGCGTCTGCTCGATCT TGAACCGTTCGCCGAGAAACCCGCCTTCCGCAAAGCCTTCGCCGAGCAACGGTTGCACAGCAAAAAGGCCCTCGCTTACC TGATCCATGAACGGCTGGGGATCGCGGTCAACCCGGCGGCGATGTTCGACGTGCAGGTCAAACGGATCCACGAATACAAA CGCCAGCTGCTCAACCTGATGCACACCGTCGCGCTGTATCAGGCGATCCGTGCCGAGCCGGAAATCGACTGGGTGCCACG GGTGAAAATCTTCGCCGGCAAGGCTGCGGCGAGTTATCACCAGGCCAAGCTGATCATCAAACTGACCAACGACATCGCCC GGGTGGTGAACAACGACCCGACCGTGCGCGGCCTGCTCAAAGTGGTGTTCCTGCCCAACTACAATGTCAGCCTGGCGGAA AGCATCATTCCGGCGGCGGACCTGTCGGAGCAGATCTCCACCGCCGGTTTCGAGGCCTCGGGCACCAGCAACATGAAGTT CGGCCTGAACGGTGCGCTGACGATCGGCACCCTCGACGGCGCCAACGTGGAAATGTGCGAAAACATCGGCGCCGAGCACA TGTTCATCTTTGGTCTCAGTGCCCAGCAGGTCGAGGCGCGCAAGCAGAACCACGAGTTCAGCGCGGTGCCGGACATTGCC GCGTCCCATCGCCTCAACGATGTATTGCAGGCGATCCGCAGCGGGGTGTTCTCGCCGGACGACACGTCGCGCTACACCGG GCTGATCGATTCGCTGGTGGATTACGACCGGTTCTTCGTCTGCGCCGATTTCGACTCCTACTGGGAGGCGCAGATGCGTG TCGATGCGCATTGGCACGACGCCAACAACTGGTGGCGTTCGGCGGTGCTGAATACCTCTCGCATGGGTTGGTTCTCGTCC GACCGGACTATCCGCGAGTACGCCACGGATATCTGGAAGGCACTCGAGTAA
Upstream 100 bases:
>100_bases TCGATCTCACACTCTCGGTAAAAACTGCCGAACCAGAGCCCTTACCGTCGGTCAGACCGTCTAGGCTCTGACAACTCCCC GCTCGCTCGAGGTCCTATCG
Downstream 100 bases:
>100_bases CTTTTAGCGACAAATGTGCGCCCGGCCCCACGATTGTTGGGCCGGGCCGATATACTGAGCCTTGGTTCCGCCCCGCCACG GGGCTGCTCAGGGATATCGA
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 816; Mature: 815
Protein sequence:
>816_residues MTQEPLVREAEVAAFRDAVLTKLTYAVGKDPDHAFDHDWFEAIALAARDHMVEHWMDHTRQIYRKGQKRVYYLSLEFLIG RLLYDSLSNLGLLDVAREALTELGVDLERIRILEPDAALGNGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQAIVD GWQQEQTEHWLDFGNPWEFERPEVVYPIGFGGSVETVTDANGNSRQVWHPAETVRAIAYDTPVVGWRGASVNTLRLWRAR AMEDLHLERFNAGDHLGAVAEVARAESISRVLYPADSTEAGQELRLRQEYFFVAASLQDLLRRHRNMHTSVLTLGDHAAI QLNDTHPSIAVAELMRQLVDVYDVAWDAAWQVTVDTLSYTNHTLLPEALETWPVGLMERMLPRHMQIIYLINAQHIDSLR AKGIHDFDVLRAVSLIEEDNGRRVRMGNLAFLGSHSVNGVSGLHTQLMRKTVFAELHKLYPERINNKTNGITFRRWLYQA NPELTSMLVDALGPDVLDNPEERLLDLEPFAEKPAFRKAFAEQRLHSKKALAYLIHERLGIAVNPAAMFDVQVKRIHEYK RQLLNLMHTVALYQAIRAEPEIDWVPRVKIFAGKAAASYHQAKLIIKLTNDIARVVNNDPTVRGLLKVVFLPNYNVSLAE SIIPAADLSEQISTAGFEASGTSNMKFGLNGALTIGTLDGANVEMCENIGAEHMFIFGLSAQQVEARKQNHEFSAVPDIA ASHRLNDVLQAIRSGVFSPDDTSRYTGLIDSLVDYDRFFVCADFDSYWEAQMRVDAHWHDANNWWRSAVLNTSRMGWFSS DRTIREYATDIWKALE
Sequences:
>Translated_816_residues MTQEPLVREAEVAAFRDAVLTKLTYAVGKDPDHAFDHDWFEAIALAARDHMVEHWMDHTRQIYRKGQKRVYYLSLEFLIG RLLYDSLSNLGLLDVAREALTELGVDLERIRILEPDAALGNGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQAIVD GWQQEQTEHWLDFGNPWEFERPEVVYPIGFGGSVETVTDANGNSRQVWHPAETVRAIAYDTPVVGWRGASVNTLRLWRAR AMEDLHLERFNAGDHLGAVAEVARAESISRVLYPADSTEAGQELRLRQEYFFVAASLQDLLRRHRNMHTSVLTLGDHAAI QLNDTHPSIAVAELMRQLVDVYDVAWDAAWQVTVDTLSYTNHTLLPEALETWPVGLMERMLPRHMQIIYLINAQHIDSLR AKGIHDFDVLRAVSLIEEDNGRRVRMGNLAFLGSHSVNGVSGLHTQLMRKTVFAELHKLYPERINNKTNGITFRRWLYQA NPELTSMLVDALGPDVLDNPEERLLDLEPFAEKPAFRKAFAEQRLHSKKALAYLIHERLGIAVNPAAMFDVQVKRIHEYK RQLLNLMHTVALYQAIRAEPEIDWVPRVKIFAGKAAASYHQAKLIIKLTNDIARVVNNDPTVRGLLKVVFLPNYNVSLAE SIIPAADLSEQISTAGFEASGTSNMKFGLNGALTIGTLDGANVEMCENIGAEHMFIFGLSAQQVEARKQNHEFSAVPDIA ASHRLNDVLQAIRSGVFSPDDTSRYTGLIDSLVDYDRFFVCADFDSYWEAQMRVDAHWHDANNWWRSAVLNTSRMGWFSS DRTIREYATDIWKALE >Mature_815_residues TQEPLVREAEVAAFRDAVLTKLTYAVGKDPDHAFDHDWFEAIALAARDHMVEHWMDHTRQIYRKGQKRVYYLSLEFLIGR LLYDSLSNLGLLDVAREALTELGVDLERIRILEPDAALGNGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQAIVDG WQQEQTEHWLDFGNPWEFERPEVVYPIGFGGSVETVTDANGNSRQVWHPAETVRAIAYDTPVVGWRGASVNTLRLWRARA MEDLHLERFNAGDHLGAVAEVARAESISRVLYPADSTEAGQELRLRQEYFFVAASLQDLLRRHRNMHTSVLTLGDHAAIQ LNDTHPSIAVAELMRQLVDVYDVAWDAAWQVTVDTLSYTNHTLLPEALETWPVGLMERMLPRHMQIIYLINAQHIDSLRA KGIHDFDVLRAVSLIEEDNGRRVRMGNLAFLGSHSVNGVSGLHTQLMRKTVFAELHKLYPERINNKTNGITFRRWLYQAN PELTSMLVDALGPDVLDNPEERLLDLEPFAEKPAFRKAFAEQRLHSKKALAYLIHERLGIAVNPAAMFDVQVKRIHEYKR QLLNLMHTVALYQAIRAEPEIDWVPRVKIFAGKAAASYHQAKLIIKLTNDIARVVNNDPTVRGLLKVVFLPNYNVSLAES IIPAADLSEQISTAGFEASGTSNMKFGLNGALTIGTLDGANVEMCENIGAEHMFIFGLSAQQVEARKQNHEFSAVPDIAA SHRLNDVLQAIRSGVFSPDDTSRYTGLIDSLVDYDRFFVCADFDSYWEAQMRVDAHWHDANNWWRSAVLNTSRMGWFSSD RTIREYATDIWKALE
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=811, Percent_Identity=48.2120838471023, Blast_Score=741, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=814, Percent_Identity=47.5429975429975, Blast_Score=731, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=803, Percent_Identity=47.3225404732254, Blast_Score=722, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=814, Percent_Identity=45.4545454545455, Blast_Score=677, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=670, Percent_Identity=46.7164179104478, Blast_Score=613, Evalue=1e-175, Organism=Escherichia coli, GI2367228, Length=803, Percent_Identity=48.8169364881694, Blast_Score=769, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=750, Percent_Identity=45.8666666666667, Blast_Score=644, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=812, Percent_Identity=48.0295566502463, Blast_Score=764, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=812, Percent_Identity=48.0295566502463, Blast_Score=763, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=837, Percent_Identity=44.205495818399, Blast_Score=647, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=801, Percent_Identity=46.5667915106117, Blast_Score=733, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=801, Percent_Identity=46.5667915106117, Blast_Score=733, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 92317; Mature: 92186
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQEPLVREAEVAAFRDAVLTKLTYAVGKDPDHAFDHDWFEAIALAARDHMVEHWMDHTR CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QIYRKGQKRVYYLSLEFLIGRLLYDSLSNLGLLDVAREALTELGVDLERIRILEPDAALG HHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCC NGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQAIVDGWQQEQTEHWLDFGNPWEFE CCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC RPEVVYPIGFGGSVETVTDANGNSRQVWHPAETVRAIAYDTPVVGWRGASVNTLRLWRAR CCCEEEEECCCCCCCEEECCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH AMEDLHLERFNAGDHLGAVAEVARAESISRVLYPADSTEAGQELRLRQEYFFVAASLQDL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHH LRRHRNMHTSVLTLGDHAAIQLNDTHPSIAVAELMRQLVDVYDVAWDAAWQVTVDTLSYT HHHHCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCC NHTLLPEALETWPVGLMERMLPRHMQIIYLINAQHIDSLRAKGIHDFDVLRAVSLIEEDN CCCCCHHHHHHCCHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCC GRRVRMGNLAFLGSHSVNGVSGLHTQLMRKTVFAELHKLYPERINNKTNGITFRRWLYQA CCEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHC NPELTSMLVDALGPDVLDNPEERLLDLEPFAEKPAFRKAFAEQRLHSKKALAYLIHERLG CHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC IAVNPAAMFDVQVKRIHEYKRQLLNLMHTVALYQAIRAEPEIDWVPRVKIFAGKAAASYH CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHH QAKLIIKLTNDIARVVNNDPTVRGLLKVVFLPNYNVSLAESIIPAADLSEQISTAGFEAS HEEEEEEEHHHHHHHHCCCCHHHHHHHEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCC GTSNMKFGLNGALTIGTLDGANVEMCENIGAEHMFIFGLSAQQVEARKQNHEFSAVPDIA CCCCEEECCCCEEEEEECCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHH ASHRLNDVLQAIRSGVFSPDDTSRYTGLIDSLVDYDRFFVCADFDSYWEAQMRVDAHWHD HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHEEEEEEEEC ANNWWRSAVLNTSRMGWFSSDRTIREYATDIWKALE CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TQEPLVREAEVAAFRDAVLTKLTYAVGKDPDHAFDHDWFEAIALAARDHMVEHWMDHTR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QIYRKGQKRVYYLSLEFLIGRLLYDSLSNLGLLDVAREALTELGVDLERIRILEPDAALG HHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCC NGGLGRLAACFMESMSTLGIAGHGYGIRYEHGLFRQAIVDGWQQEQTEHWLDFGNPWEFE CCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC RPEVVYPIGFGGSVETVTDANGNSRQVWHPAETVRAIAYDTPVVGWRGASVNTLRLWRAR CCCEEEEECCCCCCCEEECCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH AMEDLHLERFNAGDHLGAVAEVARAESISRVLYPADSTEAGQELRLRQEYFFVAASLQDL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHH LRRHRNMHTSVLTLGDHAAIQLNDTHPSIAVAELMRQLVDVYDVAWDAAWQVTVDTLSYT HHHHCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCC NHTLLPEALETWPVGLMERMLPRHMQIIYLINAQHIDSLRAKGIHDFDVLRAVSLIEEDN CCCCCHHHHHHCCHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCC GRRVRMGNLAFLGSHSVNGVSGLHTQLMRKTVFAELHKLYPERINNKTNGITFRRWLYQA CCEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHC NPELTSMLVDALGPDVLDNPEERLLDLEPFAEKPAFRKAFAEQRLHSKKALAYLIHERLG CHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC IAVNPAAMFDVQVKRIHEYKRQLLNLMHTVALYQAIRAEPEIDWVPRVKIFAGKAAASYH CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHH QAKLIIKLTNDIARVVNNDPTVRGLLKVVFLPNYNVSLAESIIPAADLSEQISTAGFEAS HEEEEEEEHHHHHHHHCCCCHHHHHHHEEECCCCCHHHHHHHCCHHHHHHHHHHCCCCCC GTSNMKFGLNGALTIGTLDGANVEMCENIGAEHMFIFGLSAQQVEARKQNHEFSAVPDIA CCCCEEECCCCEEEEEECCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHH ASHRLNDVLQAIRSGVFSPDDTSRYTGLIDSLVDYDRFFVCADFDSYWEAQMRVDAHWHD HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHEEEEEEEEC ANNWWRSAVLNTSRMGWFSSDRTIREYATDIWKALE CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]