| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456544
Identifier: 77456544
GI number: 77456544
Start: 361460
End: 362413
Strand: Reverse
Name: 77456544
Synonym: Pfl01_0316
Alternate gene names: NA
Gene position: 362413-361460 (Counterclockwise)
Preceding gene: 77456546
Following gene: 77456543
Centisome position: 5.63
GC content: 62.89
Gene sequence:
>954_bases ATGAACCTACAAAGTGCGCCACCTCCACTTGGCCAAGCATCCGACATTGAAAGCGAGCCCTTCCACGAGCCCGCCGCCGA CGGCTATCTGCTCGGCGGTTTCACCTGGCGTCACGCCTCACCGGACCCACAACGCCCGGTGGTGATCATCAACGCCGCCA CATCCGTGCGATGCCGCCACTACTCGCGCTTCGCGGCGTATCTGTTCGCCAATGGGTTCGACGTGATCATTTACGACTAC CGGGGCATTGGCGAGTCGCAGCCGAAGTCGATGCGGCATTTGCAGGCTTCGTGGACGGATTGGGGCGCGCTGGATTTCGA GGCGATGCTCAAACGCGCGCAGCGAGAGTTTCCCGGTCAGCCTATCGATGTGGTCGGGCACAGCTTCGGTGGCTGCGCAG CAGGCCTGGGGGCCTCCGGACAGGTAATCCGACGACTGGTGACGGTCGGCGCGCAATTCGCTTATTGGCGCGATTACGCG CCCGGGCACCGCTGGCGGATGTTCGGCAAATGGCATCTGCTGATGCCGCTGGTCACGCTGCTCTGTGGATATTTTCCGGG CAAACGACTTGGCTGGCTGGAAGATACGCCCGCCGGCGTGGTGCGCGACTGGAGCACGCCGGCCGCGCGTTATGAGCGGC GCCCGAGCGGTAGAACGATCCGCAACCTGCCCTTCGCCAACGTCCGGGCCAAAGCCCTGGCAATCAGCATCAGCGACGAT CCCTACGGCACGATTCCCGCCATCGAACGCCTGCTGGCTTACTTCCACAATGCGCAAAAGACCCACCTGCGAATCGAGCC GCAGGACATCGGCGAACAGCAAGTCGGACATTTCGCCTTTTTTCGCAGCGCATACCAAGCCACACTATGGCCCATCGCTC TGACCTGGCTGCAGACCGGCGAACTGGCCTCCGACACACCGGGGCGCAAGATCCCACGCAGCCAAGCCCTTTAA
Upstream 100 bases:
>100_bases CTTATCGAACCTTCCATCCGGTATGCACTGCGTGCCAAATCATTGCGCTACATCCCGCCTGAAGTTCATTCTCGACCCGT CCTAGCCAGGCTCGAAACCC
Downstream 100 bases:
>100_bases CGCACCACGGAACACACACCATGGCTTCCGCCAACAAGCAGCAAAAACGCGCCGCCCGGGCCAAGACCAAGGCCAAGCAG AACCGCACCAAACGTGCGGA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase-Like Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Protein; Dehydrogenase
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNLQSAPPPLGQASDIESEPFHEPAADGYLLGGFTWRHASPDPQRPVVIINAATSVRCRHYSRFAAYLFANGFDVIIYDY RGIGESQPKSMRHLQASWTDWGALDFEAMLKRAQREFPGQPIDVVGHSFGGCAAGLGASGQVIRRLVTVGAQFAYWRDYA PGHRWRMFGKWHLLMPLVTLLCGYFPGKRLGWLEDTPAGVVRDWSTPAARYERRPSGRTIRNLPFANVRAKALAISISDD PYGTIPAIERLLAYFHNAQKTHLRIEPQDIGEQQVGHFAFFRSAYQATLWPIALTWLQTGELASDTPGRKIPRSQAL
Sequences:
>Translated_317_residues MNLQSAPPPLGQASDIESEPFHEPAADGYLLGGFTWRHASPDPQRPVVIINAATSVRCRHYSRFAAYLFANGFDVIIYDY RGIGESQPKSMRHLQASWTDWGALDFEAMLKRAQREFPGQPIDVVGHSFGGCAAGLGASGQVIRRLVTVGAQFAYWRDYA PGHRWRMFGKWHLLMPLVTLLCGYFPGKRLGWLEDTPAGVVRDWSTPAARYERRPSGRTIRNLPFANVRAKALAISISDD PYGTIPAIERLLAYFHNAQKTHLRIEPQDIGEQQVGHFAFFRSAYQATLWPIALTWLQTGELASDTPGRKIPRSQAL >Mature_317_residues MNLQSAPPPLGQASDIESEPFHEPAADGYLLGGFTWRHASPDPQRPVVIINAATSVRCRHYSRFAAYLFANGFDVIIYDY RGIGESQPKSMRHLQASWTDWGALDFEAMLKRAQREFPGQPIDVVGHSFGGCAAGLGASGQVIRRLVTVGAQFAYWRDYA PGHRWRMFGKWHLLMPLVTLLCGYFPGKRLGWLEDTPAGVVRDWSTPAARYERRPSGRTIRNLPFANVRAKALAISISDD PYGTIPAIERLLAYFHNAQKTHLRIEPQDIGEQQVGHFAFFRSAYQATLWPIALTWLQTGELASDTPGRKIPRSQAL
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35492; Mature: 35492
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQSAPPPLGQASDIESEPFHEPAADGYLLGGFTWRHASPDPQRPVVIINAATSVRCRH CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCEEEEECCCCHHHHH YSRFAAYLFANGFDVIIYDYRGIGESQPKSMRHLQASWTDWGALDFEAMLKRAQREFPGQ HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC PIDVVGHSFGGCAAGLGASGQVIRRLVTVGAQFAYWRDYAPGHRWRMFGKWHLLMPLVTL CHHHHCCCCCCHHHCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCEEEECCHHHHHHHHHH LCGYFPGKRLGWLEDTPAGVVRDWSTPAARYERRPSGRTIRNLPFANVRAKALAISISDD HHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCC PYGTIPAIERLLAYFHNAQKTHLRIEPQDIGEQQVGHFAFFRSAYQATLWPIALTWLQTG CCCCHHHHHHHHHHHHCCCCCEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ELASDTPGRKIPRSQAL CCCCCCCCCCCCHHCCC >Mature Secondary Structure MNLQSAPPPLGQASDIESEPFHEPAADGYLLGGFTWRHASPDPQRPVVIINAATSVRCRH CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCEEEEECCCCHHHHH YSRFAAYLFANGFDVIIYDYRGIGESQPKSMRHLQASWTDWGALDFEAMLKRAQREFPGQ HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC PIDVVGHSFGGCAAGLGASGQVIRRLVTVGAQFAYWRDYAPGHRWRMFGKWHLLMPLVTL CHHHHCCCCCCHHHCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCEEEECCHHHHHHHHHH LCGYFPGKRLGWLEDTPAGVVRDWSTPAARYERRPSGRTIRNLPFANVRAKALAISISDD HHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCC PYGTIPAIERLLAYFHNAQKTHLRIEPQDIGEQQVGHFAFFRSAYQATLWPIALTWLQTG CCCCHHHHHHHHHHHHCCCCCEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ELASDTPGRKIPRSQAL CCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA