BacMap

Definition	Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession	NC_007492
Length	6,438,405

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The map label for this gene is fabG [H]

Identifier: 77456530

GI number: 77456530

Start: 350434

End: 351144

Strand: Direct

Name: fabG [H]

Synonym: Pfl01_0302

Alternate gene names: 77456530

Gene position: 350434-351144 (Clockwise)

Preceding gene: 77456529

Following gene: 77456532

Centisome position: 5.44

GC content: 61.6

Gene sequence:

>711_bases
ATGAGCAACTCGAAAAAAACCGTCGTTATCACTGGCGCCTCTCAAGGTCTGGGCGAAGGCATGGTCAAGGCCTTCCGTGA
ACTGGGCTACAACATCGTCGCCACCTCGCGCTCGATCAAGCCGTCGAACGACCCGCAGATCCTGACCATCGCCGGCGACA
TCGGCGACCCGGCCACCGCTCAACGGGTGATCAGCGAAGGCGTGGCACGCTTCGGCCGCATCGACACCCTGGTCAACAAC
GCCGGCATCTTCGTCGCCAAACCGTTCACCGCCTACACCCCGGAAGACTACGCGGCGGTGCTGTCGGTCAACCTCAACGG
CTTCTTCTACATCACCCAACTGGCCATCGCCGAGATGGAAAAACAGGGCAAGGGCCACGTGGTCAACATCACCACCAGCC
TGGTCGACCACGCCATCGACGGCGTGCCCTCGGTCCTCGCTTCGCTGACCAAGGGTGGCCTCAACGCCGCCACCAAATCC
CTGGCCATCGAATACGCCAAACGCGGAATACGGGTGAACGCGGTATCGCCGGGCATCATCAAAACGCCGATGCACGGCGA
GGAAACCCATGAGGCACTGGGCGCGCTGCATCCGGTTGGACACATGGGCGAAATCGACGACATTGCGCAGGCGGTGGTGT
ACCTCGATAACGCGAACTTTGTGACTGGCGAGATTCTGCATGTGGATGGCGGGCAGAGCGCAGGGCACTGA

Upstream 100 bases:

>100_bases
CCTGGTTTCCGGTTCGCAATCGGTCGAGTACTACGAACAAATGCTGAAACAACTGGCTGCGGCCTGATTCAACACCTACT
TATTGATTGAGGATTTCATC

Downstream 100 bases:

>100_bases
TTGATCCGGTAACACAAAGCCCTTGCAGCGATGCGAGGGCTTTTTTGTGGGCGACGATTTACGGATCGGAGCTCAGCACT
TTGACCGCATCATCGACCAG

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSNSKKTVVITGASQGLGEGMVKAFRELGYNIVATSRSIKPSNDPQILTIAGDIGDPATAQRVISEGVARFGRIDTLVNN
AGIFVAKPFTAYTPEDYAAVLSVNLNGFFYITQLAIAEMEKQGKGHVVNITTSLVDHAIDGVPSVLASLTKGGLNAATKS
LAIEYAKRGIRVNAVSPGIIKTPMHGEETHEALGALHPVGHMGEIDDIAQAVVYLDNANFVTGEILHVDGGQSAGH

Sequences:

>Translated_236_residues
MSNSKKTVVITGASQGLGEGMVKAFRELGYNIVATSRSIKPSNDPQILTIAGDIGDPATAQRVISEGVARFGRIDTLVNN
AGIFVAKPFTAYTPEDYAAVLSVNLNGFFYITQLAIAEMEKQGKGHVVNITTSLVDHAIDGVPSVLASLTKGGLNAATKS
LAIEYAKRGIRVNAVSPGIIKTPMHGEETHEALGALHPVGHMGEIDDIAQAVVYLDNANFVTGEILHVDGGQSAGH
>Mature_235_residues
SNSKKTVVITGASQGLGEGMVKAFRELGYNIVATSRSIKPSNDPQILTIAGDIGDPATAQRVISEGVARFGRIDTLVNNA
GIFVAKPFTAYTPEDYAAVLSVNLNGFFYITQLAIAEMEKQGKGHVVNITTSLVDHAIDGVPSVLASLTKGGLNAATKSL
AIEYAKRGIRVNAVSPGIIKTPMHGEETHEALGALHPVGHMGEIDDIAQAVVYLDNANFVTGEILHVDGGQSAGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=240, Percent_Identity=32.0833333333333, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI40254992, Length=232, Percent_Identity=31.0344827586207, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI59889578, Length=212, Percent_Identity=35.377358490566, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=29.2, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=28.4584980237154, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI4503301, Length=228, Percent_Identity=29.3859649122807, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI15277342, Length=186, Percent_Identity=28.494623655914, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI66933014, Length=244, Percent_Identity=26.6393442622951, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI4758504, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=25.3968253968254, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=26.6393442622951, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI4504505, Length=200, Percent_Identity=30, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=30.5220883534137, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=31.4285714285714, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=30.4526748971193, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=31.0483870967742, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=27.8688524590164, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082160, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=28.4, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=26.9709543568465, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI2367175, Length=259, Percent_Identity=31.6602316602317, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=26.4, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787820, Length=226, Percent_Identity=23.4513274336283, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI2367365, Length=238, Percent_Identity=26.0504201680672, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=30.7392996108949, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=30.1960784313725, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=29.3893129770992, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=28.5140562248996, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17562904, Length=272, Percent_Identity=29.0441176470588, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=29.811320754717, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=28.968253968254, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=31.1475409836066, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=29.1187739463602, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=31.0204081632653, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=26.4150943396226, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=27.8625954198473, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=28.4, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=25.3968253968254, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=28.2442748091603, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=28.8, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=27.4809160305344, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=28.4644194756554, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=28.4090909090909, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=25.3787878787879, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=197, Percent_Identity=30.9644670050761, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=25.0950570342205, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=26.9961977186312, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=25.9541984732824, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=24.4274809160305, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=194, Percent_Identity=29.8969072164948, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=32.8125, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=33.0739299610895, Blast_Score=120, Evalue=8e-28,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=33.596837944664, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=32.6693227091633, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=30.327868852459, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=30.0395256916996, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=26.1410788381743, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=24.390243902439, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=28.3505154639175, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24641232, Length=228, Percent_Identity=28.0701754385965, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21357673, Length=197, Percent_Identity=26.9035532994924, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI116007236, Length=230, Percent_Identity=27.3913043478261, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24648693, Length=231, Percent_Identity=29.4372294372294, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21355889, Length=231, Percent_Identity=29.4372294372294, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24733; Mature: 24602

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSKKTVVITGASQGLGEGMVKAFRELGYNIVATSRSIKPSNDPQILTIAGDIGDPATA
CCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHH
QRVISEGVARFGRIDTLVNNAGIFVAKPFTAYTPEDYAAVLSVNLNGFFYITQLAIAEME
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHH
KQGKGHVVNITTSLVDHAIDGVPSVLASLTKGGLNAATKSLAIEYAKRGIRVNAVSPGII
HCCCCCEEEEHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCEE
KTPMHGEETHEALGALHPVGHMGEIDDIAQAVVYLDNANFVTGEILHVDGGQSAGH
ECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
SNSKKTVVITGASQGLGEGMVKAFRELGYNIVATSRSIKPSNDPQILTIAGDIGDPATA
CCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHH
QRVISEGVARFGRIDTLVNNAGIFVAKPFTAYTPEDYAAVLSVNLNGFFYITQLAIAEME
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHH
KQGKGHVVNITTSLVDHAIDGVPSVLASLTKGGLNAATKSLAIEYAKRGIRVNAVSPGII
HCCCCCEEEEHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCEE
KTPMHGEETHEALGALHPVGHMGEIDDIAQAVVYLDNANFVTGEILHVDGGQSAGH
ECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]