Click here to switch to the map view.

The map label for this gene is ygaZ [C]

Identifier: 77456526

GI number: 77456526

Start: 347306

End: 348022

Strand: Direct

Name: ygaZ [C]

Synonym: Pfl01_0298

Alternate gene names: 77456526

Gene position: 347306-348022 (Clockwise)

Preceding gene: 77456525

Following gene: 77456528

Centisome position: 5.39

GC content: 62.06

Gene sequence:

>717_bases
ATGAATGAAACATCCGGCAGTGCGCCGCTGATGGTCGACCGTCAGCCGTCGCGCACCTTTGCCGAAGCCAGCCCGGTGGT
GGCCGGTTACTTCACCGTGTCGTTCGTGTTCGGGCTGATGGCCGTCAACGCCGGGCTGCCGTTGTGGCTGCCGGTGGCGA
TGTGTCTGTTCGTGTATGCCGGGGCTTCGCAATTTGCGGCGCTGGCGCTGATCAGCAGTGGGGCGTCGCTGACCACCATC
GTGCTGACCACGTTTCTGATCAACGCGCGGCACATGCTGATGTCGGTCTACATGGCGAAAGCCCTGCGGGCGCTGGGCCT
GAGTCGCATGGAACGCTGGTGTTACGCCGGCGGCCTGACCGATGAATCGTTCGCCTTCCACAGCGTCAAACTGGGCACCG
GGGCGCCGGTGAACGTCCGTTATCTGATTGGCTTCAACCTGTTCTGCCACACCTCGTGGGTGATCGGCGGATTGCTCGGC
GCCCTGTGCGCGCAGTACGCCTCGCACTTGATCAAATACCAGCTCGATTACGCGCTGACCGCGATGATGCTCTACGTCCT
GGTCTCACTGTGCAACACCCGCAACAAACTCATCGCCGCCTTGGCCGCAGTGGTCTGCATGGGCGCACTGAGCCTGGTGG
GCAGCTCGCCATTCAACGTTTTCATCGCCACGTTTGTGGGCTGCGGAGTGGGTGTATGCCTGACCAAACGTTCCTGA

Upstream 100 bases:

>100_bases
TGTTCCTGTTCGTCGATGATGCTAACCTCGCGGGCAAGCGTTTCTGGACGGCCCAGGGTTTTTGCGAACCTCACGGCGAG
CGGACATTTGAGAGGGATCT

Downstream 100 bases:

>100_bases
TTCTGGTGGTCGCGCTGATGATGGCCGTGACCTTTTTGCCACGGGCCCTGCCGTTGCAGGTCAACACCGAACACTGGCCG
CCCTTCGTCGCCCGCGCGCT

Product: AzlC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNETSGSAPLMVDRQPSRTFAEASPVVAGYFTVSFVFGLMAVNAGLPLWLPVAMCLFVYAGASQFAALALISSGASLTTI
VLTTFLINARHMLMSVYMAKALRALGLSRMERWCYAGGLTDESFAFHSVKLGTGAPVNVRYLIGFNLFCHTSWVIGGLLG
ALCAQYASHLIKYQLDYALTAMMLYVLVSLCNTRNKLIAALAAVVCMGALSLVGSSPFNVFIATFVGCGVGVCLTKRS

Sequences:

>Translated_238_residues
MNETSGSAPLMVDRQPSRTFAEASPVVAGYFTVSFVFGLMAVNAGLPLWLPVAMCLFVYAGASQFAALALISSGASLTTI
VLTTFLINARHMLMSVYMAKALRALGLSRMERWCYAGGLTDESFAFHSVKLGTGAPVNVRYLIGFNLFCHTSWVIGGLLG
ALCAQYASHLIKYQLDYALTAMMLYVLVSLCNTRNKLIAALAAVVCMGALSLVGSSPFNVFIATFVGCGVGVCLTKRS
>Mature_238_residues
MNETSGSAPLMVDRQPSRTFAEASPVVAGYFTVSFVFGLMAVNAGLPLWLPVAMCLFVYAGASQFAALALISSGASLTTI
VLTTFLINARHMLMSVYMAKALRALGLSRMERWCYAGGLTDESFAFHSVKLGTGAPVNVRYLIGFNLFCHTSWVIGGLLG
ALCAQYASHLIKYQLDYALTAMMLYVLVSLCNTRNKLIAALAAVVCMGALSLVGSSPFNVFIATFVGCGVGVCLTKRS

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=235, Percent_Identity=30.6382978723404, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25357; Mature: 25357

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETSGSAPLMVDRQPSRTFAEASPVVAGYFTVSFVFGLMAVNAGLPLWLPVAMCLFVYA
CCCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GASQFAALALISSGASLTTIVLTTFLINARHMLMSVYMAKALRALGLSRMERWCYAGGLT
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DESFAFHSVKLGTGAPVNVRYLIGFNLFCHTSWVIGGLLGALCAQYASHLIKYQLDYALT
CCCHHEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMMLYVLVSLCNTRNKLIAALAAVVCMGALSLVGSSPFNVFIATFVGCGVGVCLTKRS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHEEECCC
>Mature Secondary Structure
MNETSGSAPLMVDRQPSRTFAEASPVVAGYFTVSFVFGLMAVNAGLPLWLPVAMCLFVYA
CCCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GASQFAALALISSGASLTTIVLTTFLINARHMLMSVYMAKALRALGLSRMERWCYAGGLT
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DESFAFHSVKLGTGAPVNVRYLIGFNLFCHTSWVIGGLLGALCAQYASHLIKYQLDYALT
CCCHHEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMMLYVLVSLCNTRNKLIAALAAVVCMGALSLVGSSPFNVFIATFVGCGVGVCLTKRS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]